Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 3,883,616 | C→G | 6.5% | A197A (GCC→GCG) ‡ | PP_3428 → | TPR repeat‑containing protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 3,883,616 | 0 | C | G | 6.5% | 339.7 / 13.3 | 108 | A197A (GCC→GCG) ‡ | PP_3428 | TPR repeat‑containing protein |
Reads supporting (aligned to +/- strand): ref base C (53/47); new base G (3/4); total (57/51) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.07e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.54e-01 |
Only 100 of 112 total aligned reads displayed.
GACGCCATCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGT > NC_002947/3883467‑3883764 | gACGCCGTCTGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGcc < 2:649116/150‑1 (MQ=255) gACGCCATCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGcc < 1:1194965/150‑1 (MQ=255) gACGCCATCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGcc > 2:100637/1‑150 (MQ=255) cATCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCa < 2:237355/150‑1 (MQ=255) cATCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCa < 2:499951/150‑1 (MQ=255) cGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCagcg > 1:2766264/1‑150 (MQ=255) ggCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCagcga < 1:2706769/150‑1 (MQ=255) ctctATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCagcgagcg > 2:1340380/1‑150 (MQ=255) tctATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAgcgc > 1:981907/1‑150 (MQ=255) ctATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGGGCTGCagcggcgtgc < 2:482271/150‑7 (MQ=255) ctATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGAAGGCTATTTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCt > 1:689355/1‑150 (MQ=255) tATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCACGTGCACCTGGCGCGCCTGTCCCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTc < 2:1649896/150‑1 (MQ=255) tttCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTcgc > 1:2913034/1‑150 (MQ=255) gCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTg > 2:1186281/1‑150 (MQ=255) cccTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGccc > 1:1340516/1‑150 (MQ=255) cccTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGccc > 2:1654925/1‑150 (MQ=255) tCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCgg > 2:271389/1‑136 (MQ=255) cAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAAcc < 2:2727159/150‑1 (MQ=255) aGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGTGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCt > 2:1760185/1‑150 (MQ=255) aGCCCTGGAGCAATACAAGCAAGCCCTGTATCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCt > 1:2374364/1‑150 (MQ=255) ccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGa > 1:1151088/1‑150 (MQ=255) cTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGAt < 1:615742/150‑1 (MQ=255) tGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCTAGCGCTCGCGGTTGCCCCCGGCAAc < 2:465414/143‑1 (MQ=255) aGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGccc < 2:2374364/150‑1 (MQ=255) cAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTg > 1:2188130/1‑150 (MQ=255) cAATACCAGCAAGCCCTGGAGCAACAGAAGAAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTg > 1:2860709/1‑150 (MQ=255) aaTACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTgg > 1:2153576/1‑150 (MQ=255) aaTACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTgg < 1:1099608/150‑1 (MQ=255) ccAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGAc > 2:2326057/1‑150 (MQ=255) cAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGccc > 1:1230718/1‑139 (MQ=255) cAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGccc < 2:1230718/139‑1 (MQ=255) cAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAg < 1:1186281/150‑1 (MQ=255) cAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAg < 2:2766264/150‑1 (MQ=255) ggAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCt > 1:1709406/1‑150 (MQ=255) gAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAgg < 2:925219/142‑1 (MQ=255) aCAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGa < 2:1151088/150‑1 (MQ=255) cAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCt < 2:2613609/83‑1 (MQ=255) cAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCt > 1:2613609/1‑83 (MQ=255) ccTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGGGCTGCagc > 1:1755102/1‑85 (MQ=255) ccTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGGGCTGCagc < 2:1755102/85‑1 (MQ=255) cTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGtt < 2:2625063/98‑1 (MQ=255) cTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGtt > 1:2625063/1‑98 (MQ=255) gAAGATGCCGACGCCCAAGTGCACATTACCTTCCTTTACCTGCACGAAAACGACTACACGCATCGCC‑CTGACGGCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAg < 1:55946/150‑1 (MQ=255) aaGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTc > 1:2670186/1‑126 (MQ=255) aaGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTc < 2:2670186/126‑1 (MQ=255) aaGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAgg > 1:1332457/1‑150 (MQ=255) aaGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAgg < 1:2326057/150‑1 (MQ=255) aaGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAgg < 2:2153576/150‑1 (MQ=255) aaGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAgg < 2:211144/150‑1 (MQ=255) aaGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGAAGCACTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAgg > 1:1051979/1‑150 (MQ=255) gATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAAc > 2:447221/1‑105 (MQ=255) gATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAAc < 1:447221/105‑1 (MQ=255) gCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCacgac > 1:2094475/1‑150 (MQ=255) ccAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAg > 1:470302/1‑130 (MQ=255) ccAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAg < 2:470302/130‑1 (MQ=255) ccAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGccac < 2:2711215/142‑1 (MQ=255) ccAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGccac > 1:2711215/1‑142 (MQ=255) ccAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGc > 1:1306673/1‑150 (MQ=255) tGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTccc > 2:959077/1‑150 (MQ=255) cTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGcc > 2:483994/1‑93 (MQ=255) cTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGcc < 1:483994/93‑1 (MQ=255) cTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAg > 1:894586/1‑150 (MQ=255) ccTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTggg > 2:356081/1‑150 (MQ=255) ccTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTggg < 2:689355/150‑1 (MQ=255) cTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCg < 1:1861130/79‑1 (MQ=255) cTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCg > 2:1861130/1‑79 (MQ=255) cTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGc < 2:2377709/150‑1 (MQ=255) tACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCaaa > 1:1645482/1‑150 (MQ=255) tGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGa > 1:32222/1‑73 (MQ=255) tGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGccc > 2:492775/1‑150 (MQ=255) tGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGccc < 1:3029193/150‑1 (MQ=255) gCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAgg < 1:2563617/110‑1 (MQ=255) cGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGgc > 1:2373067/1‑150 (MQ=255) aaaCGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCt > 2:941561/1‑150 (MQ=255) aCGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGa > 2:123857/1‑150 (MQ=255) aCGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGa < 1:2804617/150‑1 (MQ=255) cGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAg < 2:1645482/150‑1 (MQ=255) gACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGc > 1:2218411/1‑150 (MQ=255) cTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGACCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGccc < 2:2218411/150‑1 (MQ=255) cacgca‑cgCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGa < 2:2310234/150‑1 (MQ=255) acgca‑cgcCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGAc > 1:2299512/1‑150 (MQ=255) gca‑cgcCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGc < 1:1120044/94‑1 (MQ=255) gca‑cgcCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGc > 2:1120044/1‑94 (MQ=255) gca‑cgcCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGGGcccccgcac > 2:880583/1‑145 (MQ=255) gca‑cgcCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTc > 1:1079487/1‑150 (MQ=255) ca‑cgcCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCg < 1:100637/150‑1 (MQ=255) ca‑cgcCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCg < 2:1079487/150‑1 (MQ=255) a‑cgcCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCgg > 1:1521027/1‑150 (MQ=255) ctcgcTGCAGGGCTGCAGCG‑GCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGc < 2:620051/135‑1 (MQ=255) ctcgcTGCAGGGCTGCAGCG‑GCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGc > 1:620051/3‑137 (MQ=255) tcgcTGCAGGGCTGCAGCGGGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGa > 2:3019236/2‑142 (MQ=255) tcgcTGCAGGGCTGCAGCGGGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGa < 1:3019236/141‑1 (MQ=255) gcTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCttt < 2:2860709/150‑1 (MQ=255) tGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGc < 1:923299/115‑1 (MQ=255) tGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGc > 2:923299/1‑115 (MQ=255) tGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCt < 1:941561/150‑1 (MQ=255) aGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGAt > 1:1388354/1‑43 (MQ=255) aGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGAt < 2:1388354/43‑1 (MQ=255) aGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCa < 1:1309937/150‑1 (MQ=255) cccTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGt > 1:1186996/1‑150 (MQ=255) | GACGCCATCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCA‑CGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGT > NC_002947/3883467‑3883764 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |