| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,921,923 | T→A | 6.9% | intergenic (‑114/+26) | acs ← / ← peaD | acyl‑CoA synthetase/quinohemoprotein amine dehydrogenase subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,921,923 | 0 | T | A | 6.9% | 339.0 / 15.3 | 116 | intergenic (‑114/+26) | acs/peaD | acyl‑CoA synthetase/quinohemoprotein amine dehydrogenase subunit beta |
| Reads supporting (aligned to +/- strand): ref base T (54/53); new base A (3/5); total (58/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.56e-01 | |||||||||||
Only 100 of 120 total aligned reads displayed.
GTCCTGGGTGCCCTGGGTGTAGCTTGGCTGGGGCATGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGAACACCGCCAGGTCGTTGAAGGTGCCGCCCAGGTA > NC_002947/3921774‑3922071 | gTCCTGGGTGCCCTGGGTGTAGCTTGGCTGGGGCATGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGtt > 2:2801166/1‑150 (MQ=255) gCCCTGGGTGTAGCTTGGCTGGGGCATGGGCGTTCTCTTGCTGTTCTTGTGTTTTATGTGCTGGCCTCTTCTCGTGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCga > 1:1149547/1‑150 (MQ=255) cccTGGGTGTAGCTTGGCTGGGGCATGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTAAACCcgcgcc < 2:232561/150‑3 (MQ=255) cTGGGTGTAGCTTGGCTGGGGCATGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCgaaga > 1:1904991/1‑150 (MQ=255) tGGGTGTAGCTTGGCTGGGGCATGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCgaagaa < 1:1575059/150‑1 (MQ=255) tGGGTGTAGCTTGGCTGGGGCATGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTAAACCcgcgccgac < 1:1874038/150‑6 (MQ=255) gtgtAGCTTGGCTGGGGCATGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGTGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGca > 2:777244/1‑150 (MQ=255) gtAGCTTGGCTGGGGCATGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGcaca < 2:2318539/150‑1 (MQ=255) tAGCTTGGCTGGGGCATGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGcacac > 2:2240470/1‑150 (MQ=255) ttGGCTGGGGCATGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGGGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGAGGAGGATTACGTCGGCGCAGGTTTACTCGCGGAGAAGGACGCACCg > 1:1445793/1‑150 (MQ=255) tGGGGCATGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTa > 1:787216/1‑150 (MQ=255) tGGGACATGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTa < 2:1701220/150‑1 (MQ=255) ggggCATGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGGGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAg < 1:997956/150‑1 (MQ=255) gCATGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACGCAGAAGGCGCCACATCTGGGGCCTGTGGAGGCTTTCGTCGGCCCGGGTTTACCCGCGAAGAAGCACACACCGACTTGGcga > 2:2099194/1‑150 (MQ=38) gCATGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGcga > 2:1892054/1‑150 (MQ=255) aTGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGcgaa < 2:2712889/149‑1 (MQ=255) aTGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGcgaa > 1:2712889/1‑149 (MQ=255) ggCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGcgaacgaa < 2:2673400/150‑1 (MQ=255) gCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTCCACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCgaacgaac > 1:2090919/1‑150 (MQ=255) tctcTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCt < 1:315707/150‑1 (MQ=255) tctTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTgc < 2:1220157/150‑1 (MQ=255) ttGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTgcgg < 1:2753825/150‑1 (MQ=255) tGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGAGAAGACGAACACTCCGGTTTAGCGAACGAACACCTGCGGcgtc > 2:2254116/1‑150 (MQ=255) tGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCACGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGcgtc > 2:2219562/1‑150 (MQ=255) gTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCgaagaa < 1:1742262/112‑1 (MQ=255) gTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCgaagaa > 2:1742262/1‑112 (MQ=255) gTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGcgtcg > 2:3020274/1‑150 (MQ=255) ttCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGcgtcgt < 1:2240470/150‑1 (MQ=255) ttGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTAccc < 2:2502564/100‑1 (MQ=255) ttGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTAccc > 1:2502564/1‑100 (MQ=255) ttGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGcgtcgt > 1:1403830/1‑147 (MQ=255) ttGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGcgtcgt < 2:1403830/147‑1 (MQ=255) ttGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGt > 1:913043/1‑150 (MQ=255) ttGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGt > 2:20477/1‑150 (MQ=255) tgtgTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTa < 1:1179838/150‑1 (MQ=255) tgtTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGa < 1:399209/150‑1 (MQ=255) gtTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGAc < 1:2254116/150‑1 (MQ=255) tttCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACAt < 1:1892054/150‑1 (MQ=255) tttCTGTGCTGGCCTCTTCGCGGGTGAACCCCCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACAt < 1:2099194/150‑1 (MQ=255) ggCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGa < 2:1158563/137‑1 (MQ=255) ggCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGa > 1:1158563/1‑137 (MQ=255) gCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTAcc > 1:2664293/1‑82 (MQ=255) gCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTAcc < 2:2664293/82‑1 (MQ=255) gCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCgaag < 2:203145/89‑1 (MQ=255) gCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTGTACCCGCgaag > 1:203145/1‑89 (MQ=255) gCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTAAACCcgcgccga < 1:1540506/90‑5 (MQ=37) gCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTAAACCcgcgccga > 2:1540506/1‑86 (MQ=37) ctctTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGc > 1:1293497/1‑150 (MQ=255) tctTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCa > 2:2368795/1‑150 (MQ=255) cgGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTAAACCcgcgc > 1:1780642/1‑77 (MQ=38) cgGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGCGCCTGTGGAGGTTTTCGTCGGCGCGGGTAAACCcgcgc < 2:1780642/78‑2 (MQ=38) cgGGTGAACACGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTCTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGa < 1:1079480/150‑1 (MQ=255) gggTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGAt < 1:20477/150‑1 (MQ=255) aCCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGttctt > 2:2752383/1‑150 (MQ=255) cccGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTca < 1:525516/126‑1 (MQ=255) cccGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTca > 2:525516/1‑126 (MQ=255) ccGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCa > 2:2732750/1‑150 (MQ=255) ccGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCa < 1:2561344/150‑1 (MQ=255) gCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTa > 1:1938975/1‑114 (MQ=255) gCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTa < 2:1938975/114‑1 (MQ=255) gCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCAcc < 2:322629/150‑1 (MQ=255) gCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCAcc > 2:1758916/1‑150 (MQ=255) cTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCtttt > 2:2672522/1‑150 (MQ=255) tACACAGGAGGCGCCAACCTTGGGGACTGTGGAGGCTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGAACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTc > 2:2163494/1‑150 (MQ=255) acacAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGcgtc > 2:1472997/1‑102 (MQ=255) acacAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGcgtc < 1:1472997/102‑1 (MQ=255) acacAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGcgtc > 2:1473363/1‑102 (MQ=255) cacaGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCa < 2:1904991/150‑1 (MQ=255) aaggaggCTGCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACATCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGc < 2:1445793/149‑1 (MQ=255) gaggCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTa < 1:1098428/150‑1 (MQ=255) gcgcCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAGGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCg > 1:219310/1‑145 (MQ=255) gcCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGAt > 2:2265904/1‑123 (MQ=255) gcCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCgg > 1:1761357/1‑150 (MQ=255) cacaTTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCAc < 1:1221694/130‑1 (MQ=255) cacaTTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCAc > 2:1221694/1‑130 (MQ=255) aaTTTGGGGCCCGTGGATGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTg < 2:2522380/149‑1 (MQ=255) aTTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTcc < 2:2146217/134‑1 (MQ=255) aTTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTcc > 1:2146217/1‑134 (MQ=255) aTTTGGGGCCTGTGGAGGTTTCCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGa > 2:74237/1‑150 (MQ=255) tttGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGaa > 2:261009/1‑150 (MQ=255) tttGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGaa < 1:2466818/150‑1 (MQ=255) tttGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGaa < 2:1293497/150‑1 (MQ=255) gggCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGAACAcc > 2:1940266/1‑150 (MQ=255) tgtgGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGAACACCGCCAg < 1:1758916/150‑1 (MQ=255) gtgGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGAACACCGCCAgg < 1:1940266/150‑1 (MQ=255) gAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGAACACCGCCAGGTCg > 2:2434589/1‑150 (MQ=255) aGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGATATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTAGCCGGGTTGAACACCGCCAGGTCGt < 2:1149547/150‑1 (MQ=255) aGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGAACACCGCCAGGTCGt < 1:2368795/150‑1 (MQ=255) gTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGAACACCGCCAGGTCGTTg < 1:2434589/150‑1 (MQ=255) ttCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGAACACCGCCAGGTCGTTGAAg < 1:3020274/150‑1 (MQ=255) ttCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGAACACCGCCAGGTCGTTGAAg < 1:855316/150‑1 (MQ=255) cgtcgGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGACAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGAACACCGCCAGGTCGTTGAAGGt < 1:2719748/150‑1 (MQ=255) ttcttcgcgGGTAAACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGAACACCGCCAGGTCGTTGa < 1:3008131/140‑1 (MQ=255) ttcttcgcgGGTAAACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGAACACCGCCAGGTCGTTGa > 2:3008131/6‑145 (MQ=255) tcgGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCACCGTATCCGGGTTGAACACCGCCAGGTCGTTGAAGGTgc < 2:1778479/150‑1 (MQ=255) ggCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGtt < 2:559481/122‑1 (MQ=255) cgGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGAACACCGCCAGGTCGTTGAAGGTGCCGCCCa < 1:2752383/150‑1 (MQ=255) gTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGAACACCGCCAGGTCGTTGAAGGTGCCGCCCAGGt > 1:983673/1‑150 (MQ=255) tttACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGttc < 1:1808326/88‑1 (MQ=255) tttACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGAACACCGCCAGGTCGTTGAAGGTGCCGCCCAGGTa > 2:2166042/1‑150 (MQ=255) | GTCCTGGGTGCCCTGGGTGTAGCTTGGCTGGGGCATGGGCGTTCTCTTGCTGTTCTTGTGTTTTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACACAGGAGGCGCCACATTTGGGGCCTGTGGAGGTTTTCGTCGGCGCGGGTTTACCCGCGAAGAAGCACACACCGGTTTAGCGAACGAACACCTGCGGCGTCGTGGTAGACATGTCACCACCCGGCAACTTGATGTTCTTCACCTTTTCCAGCGTATCCGGGTTGAACACCGCCAGGTCGTTGAAGGTGCCGCCCAGGTA > NC_002947/3921774‑3922071 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |