| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,960,659 | T→A | 5.5% | intergenic (‑231/‑98) | mnxG ← / → PP_3491 | manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,960,659 | 0 | T | A | 5.5% | 492.8 / 15.5 | 162 | intergenic (‑231/‑98) | mnxG/PP_3491 | manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein |
| Reads supporting (aligned to +/- strand): ref base T (77/76); new base A (4/5); total (81/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.16e-01 | |||||||||||
Only 100 of 165 total aligned reads displayed.
TTGTACGATCAACCGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGG > NC_002947/3960512‑3960808 | ttGTACGATCAACCGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGCGACAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCAAAATTGtag > 1:204037/1‑148 (MQ=255) tGTACGATCAACCGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGa < 1:1545678/150‑1 (MQ=255) gTACGATCAACCGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGAt > 1:1298805/1‑150 (MQ=255) gATCAACCGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATtgtg < 2:1949911/150‑1 (MQ=255) tCAACCGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCa > 2:1720605/1‑150 (MQ=255) cAACCGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCaa < 1:1605152/150‑1 (MQ=255) aaCCGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAg < 2:1298805/150‑1 (MQ=255) ccGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGc > 2:1599935/1‑150 (MQ=255) ccGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGc > 1:557168/1‑150 (MQ=255) cGCAACGGATGGGGGTGGATCCTCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCa > 2:1443455/1‑150 (MQ=255) aTTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCa < 2:2159054/150‑1 (MQ=255) tGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATg < 2:2265101/150‑1 (MQ=255) gggAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGcc > 1:921916/1‑150 (MQ=255) ggaggaTCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCa < 1:1599935/150‑1 (MQ=255) ggaggaTCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCATTGCACAATCGACAATTGTGCaa > 1:2499432/1‑133 (MQ=255) ggaggaTCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCATTGCACAATCGACAATTGTGCaa < 2:2499432/133‑1 (MQ=255) gaggaTCCCCCAGCAGGTTCCCCCGAATCGGAGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAg > 2:1887262/1‑150 (MQ=255) aggaTCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAgg < 1:1890398/150‑1 (MQ=255) ggaTCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGa > 1:1812410/1‑150 (MQ=255) gaTCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGc < 2:2501508/140‑1 (MQ=255) cccccAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCt > 2:2008892/1‑150 (MQ=255) cccAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGc > 2:1634732/1‑150 (MQ=255) cagcagGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGa < 1:2008892/150‑1 (MQ=255) cagcagGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATCGACAATTGTGCaa < 1:767891/122‑1 (MQ=255) cagcagGGTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATCGACAATTGTGCaa > 2:767891/1‑122 (MQ=255) gTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAg < 2:450418/117‑1 (MQ=255) gTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAg > 1:450418/1‑117 (MQ=255) cccccGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGc < 2:1972485/150‑1 (MQ=255) cccccGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGc < 2:921916/150‑1 (MQ=255) cccGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATCGACAATTGTGCaa < 1:2939363/111‑1 (MQ=255) cccGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATCGACAATTGTGCaa > 2:2939363/1‑111 (MQ=255) ccGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCAt > 1:1126888/1‑123 (MQ=255) ccGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGaa > 1:1620297/1‑150 (MQ=255) ccGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGaa > 1:1496692/1‑150 (MQ=255) ggggACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGAc > 2:1546767/1‑150 (MQ=255) gACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTc > 2:2316597/1‑150 (MQ=255) gACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTc > 1:519212/1‑150 (MQ=255) cGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCAc > 2:1321098/1‑150 (MQ=255) cGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCAc > 1:299685/1‑150 (MQ=255) cGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCAc < 1:2316597/150‑1 (MQ=255) ggAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACt > 1:1706808/1‑150 (MQ=255) ggAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACt > 1:1009682/1‑150 (MQ=255) gAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACtt < 2:556781/150‑1 (MQ=255) aaTCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCTAGCGAACTCCAGACTTCACTTg > 2:1695805/1‑150 (MQ=255) aaTCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTg > 1:475773/1‑150 (MQ=255) tCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGAATCACACAAGGTAAATCCACGCGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGa > 1:376717/1‑150 (MQ=255) tCCCGTGGGGGCAAAGGCTGCGCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGa > 2:986327/1‑150 (MQ=255) ccGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATtgtg > 1:3057450/1‑87 (MQ=255) ccGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATtgtg < 2:3057450/87‑1 (MQ=255) ccGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGaaa > 1:8793/1‑150 (MQ=255) ttGGCGGCAAAGGGTGCTCCACAAGCACGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAACTTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGTCTTCACTTGGAAAAt < 2:204037/149‑1 (MQ=255) gTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAAt < 2:2129877/150‑1 (MQ=255) ggggCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTc < 2:2350598/94‑1 (MQ=255) ggggCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTc > 1:2350598/1‑94 (MQ=255) gggCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAAt < 2:1009682/150‑1 (MQ=255) gggCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAAt < 2:1759551/150‑1 (MQ=255) aaaGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGGTCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACa > 1:647487/1‑150 (MQ=255) aaaGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACa > 1:3055911/1‑150 (MQ=255) gctgctCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACaaa < 1:1962038/148‑1 (MQ=255) tgctCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATCGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAg < 2:1998482/150‑1 (MQ=255) ccACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGgag < 1:2002376/150‑1 (MQ=255) cacaAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGgaga > 1:411173/1‑150 (MQ=255) caAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGc < 1:1797631/82‑1 (MQ=255) caAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGc > 2:1797631/1‑82 (MQ=255) cgcgcgcTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCaa < 1:1720605/150‑1 (MQ=255) cgcgcTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATg < 1:1321098/150‑1 (MQ=255) gcgcTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGa < 1:963016/150‑1 (MQ=255) gcTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACt < 2:8793/150‑1 (MQ=255) gcTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACt < 2:1836133/150‑1 (MQ=255) ccTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGcaca > 1:369977/1‑150 (MQ=255) cTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGgag < 1:1353642/132‑1 (MQ=255) cTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGgag > 2:1353642/1‑132 (MQ=255) cTCACACAAGCTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCATGCGATCCTCCAGCAAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCacac > 2:829873/1‑150 (MQ=255) tCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGCTCCAGCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACg > 1:678530/1‑150 (MQ=255) tCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACg < 2:1812410/150‑1 (MQ=255) cagacaAGGTAAAAACGCACGGTACCGTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAAAGCAATGACTGCACACGc < 2:363687/147‑1 (MQ=255) acacaAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAAt < 2:2823057/115‑1 (MQ=255) acacaAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAAt > 1:2823057/1‑115 (MQ=255) cacaAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAAc > 1:196110/1‑89 (MQ=255) cacaAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAAc < 2:196110/89‑1 (MQ=255) cacaAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTc > 2:3066637/1‑150 (MQ=255) caAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCAATCTTTGTTCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCAt < 2:3024970/150‑1 (MQ=255) aaGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATa > 1:2295016/1‑150 (MQ=255) gTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATAccc > 1:240787/1‑150 (MQ=255) aaaaaCGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCg < 2:1496692/150‑1 (MQ=255) aaCGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAATAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGgca > 1:1025266/1‑150 (MQ=255) aCGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCaa > 1:1773639/1‑119 (MQ=255) cGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCATCa < 1:3066637/150‑1 (MQ=255) tACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGAc < 2:369977/150‑1 (MQ=255) ccTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCAt < 2:2295016/150‑1 (MQ=255) ttGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGa < 1:1403022/70‑1 (MQ=255) gCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAg > 2:1125291/1‑97 (MQ=255) aaTTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGc < 2:3055911/150‑1 (MQ=255) tGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGa < 2:762083/150‑1 (MQ=255) gTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAAc > 1:538799/1‑96 (MQ=255) gTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAAc < 2:538799/96‑1 (MQ=255) gTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAg > 1:2565032/1‑150 (MQ=255) gTCGACTGTGCAAGGCAAATTCGCATGTTATGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGTAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAg < 1:1443455/150‑1 (MQ=255) tCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAgg < 2:600038/150‑1 (MQ=255) tCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTCAACTCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGCGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAgg < 1:1695805/150‑1 (MQ=255) | TTGTACGATCAACCGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGG > NC_002947/3960512‑3960808 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |