| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,022,851 | C→G | 6.0% | intergenic (‑502/+166) | PP_3547 ← / ← emrB | NAD(P)‑binding oxidoreductase/multidrug transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,022,851 | 0 | C | G | 6.0% | 235.1 / 2.3 | 76 | intergenic (‑502/+166) | PP_3547/emrB | NAD(P)‑binding oxidoreductase/multidrug transporter permease |
| Reads supporting (aligned to +/- strand): ref base C (39/32); new base G (3/2); total (42/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGA > NC_002947/4022706‑4022998 | tCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGc > 1:615050/1‑150 (MQ=255) aaaCGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCTAGCGCTTGACGGGCATCCATGccc < 2:2154370/150‑1 (MQ=255) aCGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGt < 2:615050/150‑1 (MQ=255) gcgACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCa < 1:98828/150‑1 (MQ=255) cgACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATGGATGCCCGTCaa < 2:2254125/150‑2 (MQ=255) gACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCCTACTAGCACCCAGCTCTTGACGGGCATCCATGCCCGTCAcc > 2:246586/1‑150 (MQ=17) aaaaaGTAACCAAAAAGCGCTGGCTCCTATCATCCGGCCCCTGCGCTAGGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGATGACGGCCCCAGCCTGGGGACAAGCCCTTGACGGGCGTCCATGCCCATCAACTcc > 2:362322/1‑150 (MQ=14) aaaaGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTccc > 1:2627266/1‑150 (MQ=255) tAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGc < 1:958155/150‑1 (MQ=255) aaaaaCGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGc < 1:729750/127‑1 (MQ=255) aaaaaCGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCACCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGc > 2:729750/1‑127 (MQ=255) gCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCt > 2:1223950/1‑150 (MQ=40) cTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTGCCGGGGGGACCTCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCCAGCCCTGCGCTc > 1:2223490/1‑150 (MQ=255) atcatcCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTg < 2:237038/150‑1 (MQ=35) tcatcCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCNGGGCTTNCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑a > 1:1932440/1‑150 (MQ=25) cccTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAAt < 2:2946291/150‑1 (MQ=35) cTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCgcggc < 1:246586/150‑1 (MQ=40) gCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGccc > 1:1936533/1‑149 (MQ=255) gTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATc > 1:902537/1‑150 (MQ=255) ttCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATcg > 2:550316/1‑150 (MQ=255) ccTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATcgcgc > 2:1662414/1‑150 (MQ=255) cTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAGTCCGCGGCGCCTGGGCTATcgcgcg > 2:1479651/1‑150 (MQ=255) cTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATcgc > 2:266955/1‑147 (MQ=255) cTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATcgc < 1:266955/147‑1 (MQ=255) tCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATcgcgcga < 2:1978758/150‑2 (MQ=255) tCCGGGCTGGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAg > 1:1807093/1‑150 (MQ=255) cGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGaa < 2:2523307/150‑1 (MQ=255) ggCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCGATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGc > 2:1643873/1‑150 (MQ=255) cccGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGaa < 2:1234761/140‑1 (MQ=255) cccGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGaa > 1:1234761/1‑140 (MQ=255) gccggaggaCCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTAACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCGTAGAAGCAAAATCaaa > 1:594736/4‑150 (MQ=255) cGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCaaaa > 1:1778911/1‑150 (MQ=255) gggAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCACAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAg > 1:882009/1‑150 (MQ=255) ggaggaCCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGc < 2:1778911/150‑1 (MQ=255) gaCCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGc > 2:321256/1‑116 (MQ=255) gaCCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGc < 1:321256/116‑1 (MQ=255) gaCCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGaa > 2:839054/1‑150 (MQ=255) gcgcTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcga < 1:1353832/150‑1 (MQ=255) tGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagc > 2:1208897/1‑150 (MQ=255) cAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCAGTCAACATAATTCGCAAGCACTTTTCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcga < 1:362322/150‑1 (MQ=18) ccccATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagc > 2:2000373/1‑150 (MQ=255) ccccATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagc < 1:1223950/150‑1 (MQ=255) ccATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCt < 1:671655/65‑1 (MQ=37) ccATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCt > 2:671655/1‑65 (MQ=37) ccATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagc < 2:14834/142‑1 (MQ=255) ccATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagc > 1:14834/1‑142 (MQ=255) cATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgag > 1:541009/1‑150 (MQ=255) tCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCaaa > 2:116988/1‑118 (MQ=255) tCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCaaa < 1:116988/118‑1 (MQ=255) tCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTAGGAC‑CGTGCTAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGTTTAGAAGCAAAATCAACAGCCGAagcgagagcgagagcgagag < 1:1726191/150‑1 (MQ=21) cTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgagagcg < 2:2285995/150‑1 (MQ=255) tGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgagagcga > 1:2666829/1‑150 (MQ=255) gggCCCAGCGCTTGACGGGCATCGATGCCCGTCACCTCCCTTCGCAAGCCCTGCGTTCGGCCTGCTG‑CCGTCCCGATGTCTGTCGCCTGGGCTATCGCGCGCTTAGAAGCAAACTCAAACCCCGAagcgagggcgagagcgagccgggcg > 2:885273/1‑143 (MQ=17) gggCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgagagcgaga < 2:2666829/150‑1 (MQ=255) ccAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgagagcgagagcga < 2:2839330/150‑1 (MQ=255) ccAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgagagcgagagcga > 1:2839330/1‑150 (MQ=255) ccAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTAGTAATGCGGGGACAATTATCGCTCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgagagcgagagcga > 1:996340/1‑150 (MQ=18) gcgcTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgagagcgagagcgcgag < 1:1643873/150‑1 (MQ=255) cTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgagagcgagagcgagagcga < 2:2011877/150‑1 (MQ=255) cTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgagagcgagagcgagagcga < 1:550316/150‑1 (MQ=255) ttGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAAt > 2:97784/1‑104 (MQ=255) ttGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAAt > 2:97867/1‑104 (MQ=255) ttGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAAt < 1:97784/104‑1 (MQ=255) ttGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAAt < 1:97867/104‑1 (MQ=255) ttGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgagagcgagagcgagagcgag > 2:2220097/1‑150 (MQ=255) ttGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgagagcgagagcgagagcgag > 2:818045/1‑150 (MQ=255) gtGACGGGCATGGATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgagagcgagagcgagagcgag > 1:549088/2‑150 (MQ=255) tGACGGGCATGGATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGaa < 2:2878105/96‑1 (MQ=255) tGACGGGCATGGATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGaa > 1:2878105/1‑96 (MQ=255) gggCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgaga > 1:1786949/1‑122 (MQ=255) gggCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgaga < 2:1786949/122‑1 (MQ=255) gggCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCAt > 1:2375677/1‑150 (MQ=255) ggCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCgagagcgagagcgagagcgagagcgagagcgagagcgag < 1:2220097/150‑4 (MQ=255) gCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCg > 1:1251899/1‑150 (MQ=255) gCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCACGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCg > 1:2353906/1‑150 (MQ=255) aTCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCT‑CTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGa < 1:1275120/150‑1 (MQ=255) | TCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTG‑AAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGA > NC_002947/4022706‑4022998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |