| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,141,212 | T→A | 6.1% | L44Q (CTG→CAG) | PP_3645 → | L‑proline amide hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,141,212 | 0 | T | A | 6.1% | 353.1 / 12.5 | 114 | L44Q (CTG→CAG) | PP_3645 | L‑proline amide hydrolase |
| Reads supporting (aligned to +/- strand): ref base T (54/53); new base A (4/3); total (58/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.74e-01 | |||||||||||
Only 100 of 127 total aligned reads displayed.
CCTTCAAGGAGCGCCCTCCATGATTCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGCTTGACCACCTGCAAATTGCACAAGCCACCGTGATCGGC > NC_002947/4141063‑4141360 | ccTTCAAGGAGCGCCCTCCATGATTCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTtggcct < 1:1585455/150‑1 (MQ=255) cTTCAAGGAGCGCCCTCCATGATTCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTtggcctg > 2:1827895/1‑150 (MQ=255) cTTCAAGGAGCGCCCTCCATGATTCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTtggcctg < 2:723877/150‑1 (MQ=255) ttCAAGGAGCGCCCTCCATGATTCAGCCTGTCGCTGAACGCACACCTTCCGGCACCAGCTCACTGGATGTCCGAGA‑GGCCGTTACGTTAACGCTTATTCACCGCGTGGGCCTGAACAAGGAAATGTGGGGCGGACAGTTCGTtggcctgg > 1:2994705/1‑150 (MQ=255) ttCAAGGAGCGCCCTCCATGATTCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTtggcctgg > 1:830941/1‑150 (MQ=255) ttCAAGGAGCGCCCTCCATGATTCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTtggcctgg > 1:1113021/1‑150 (MQ=255) ttCAAGGAGCGCCCTCCATGATTCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTtggcctgg > 1:764570/1‑150 (MQ=255) ttCAAGGAGCGCCCTCCATGATTCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTtggcctgg > 2:868178/1‑150 (MQ=255) ggAGCGCCCTCCATGATTCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAAc < 2:234292/150‑1 (MQ=255) cccTCCATGATTCAGCCTGTCGCTGAACGCGCACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGCAATGTGGGGCGGGCAGTTTGTTGGCCTGGCCAACGACTAc > 2:1363950/1‑150 (MQ=255) ccTCCATGATTCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTtggcct < 2:97296/136‑1 (MQ=255) cATGATTCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGt > 2:2298266/1‑150 (MQ=255) aTGATTCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTc < 2:1184960/150‑1 (MQ=255) tGATTCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCa > 1:620913/1‑150 (MQ=255) tGATTCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCa > 1:900243/1‑150 (MQ=255) aTTCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATc < 2:710378/150‑1 (MQ=255) ttCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAAc > 2:158213/1‑134 (MQ=255) ttCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTAAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAAc < 1:158213/134‑1 (MQ=255) aGCCTTGCGCGGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGTCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCt > 2:766993/1‑150 (MQ=255) cccTGTCGGTGAACGCACCCCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACTGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTa < 2:459216/149‑1 (MQ=255) ccTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTAc < 1:868178/150‑1 (MQ=255) ccTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTAc < 1:2101206/150‑1 (MQ=255) tGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGa < 2:764570/150‑1 (MQ=255) tGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGa < 1:1827895/150‑1 (MQ=255) tGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGa < 1:1764616/150‑1 (MQ=255) tGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCt < 2:880440/150‑1 (MQ=255) cGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCAGGCCAAc > 2:1759438/1‑117 (MQ=255) cGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCAGGCCAAc < 1:1759438/117‑1 (MQ=255) acacCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCAc > 2:945069/1‑150 (MQ=255) acCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAAc > 2:399997/1‑112 (MQ=255) acCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACgg > 2:488259/1‑150 (MQ=255) acCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACgg > 1:386452/1‑150 (MQ=255) cTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTc > 2:2444844/1‑150 (MQ=255) ggCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCgg < 2:680900/137‑1 (MQ=255) ggCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCgg > 1:680900/1‑137 (MQ=255) gCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGcc > 2:777657/1‑150 (MQ=255) aCCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCTTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCcgc < 1:1032155/150‑1 (MQ=255) aCCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCcgc > 2:647034/1‑150 (MQ=255) aCCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCcgc < 1:647034/150‑1 (MQ=255) aCCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCcgc < 1:1445738/150‑1 (MQ=255) aCCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCcgc > 2:435470/1‑150 (MQ=255) ccAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCcgcg < 1:41490/150‑1 (MQ=255) cAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGt > 1:1088909/1‑150 (MQ=255) tGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTAACGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGgccg > 1:2469781/1‑150 (MQ=255) aTGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGccgccg < 2:1420340/150‑1 (MQ=255) tCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGaca < 1:845187/150‑1 (MQ=255) ggCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGgccgc < 2:1696847/143‑1 (MQ=255) ggCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGgccgc > 1:1696847/1‑143 (MQ=255) gCCAGGGCCAACTCGTG‑TTGCTAACCAAGGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGacacac < 2:386452/150‑1 (MQ=255) gCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGacacac > 1:1476213/1‑150 (MQ=255) ccAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACAcc < 1:435470/150‑1 (MQ=255) cAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCg > 1:987383/1‑150 (MQ=255) ggCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAg > 1:1499162/1‑122 (MQ=255) gCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTgg > 2:2655019/1‑150 (MQ=255) aCCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAgg < 1:920385/150‑1 (MQ=255) aCCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAgg < 2:457088/150‑1 (MQ=255) cGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAAc < 1:2750666/70‑1 (MQ=255) cGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAAc > 2:2750666/1‑70 (MQ=255) gtg‑gtgCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCaaa > 1:2196271/1‑112 (MQ=255) tg‑gtgCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATg < 1:2655019/150‑1 (MQ=255) g‑gtgCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGc < 2:2019196/150‑1 (MQ=255) gtgCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTAc < 1:1808713/87‑1 (MQ=255) gtgCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTAc > 2:1808713/1‑87 (MQ=255) gCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGa < 1:945069/150‑1 (MQ=255) aTCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAg > 1:1203986/1‑150 (MQ=255) aTCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAg > 1:3018885/1‑150 (MQ=255) aCGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGc < 1:1255272/126‑1 (MQ=255) cGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGc > 1:235412/1‑150 (MQ=255) ggCGTGGGCATGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGcc < 1:1660536/150‑1 (MQ=255) gTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGcc > 1:2494459/1‑69 (MQ=255) gTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGcc < 2:2494459/69‑1 (MQ=255) gCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGc < 2:2680366/150‑1 (MQ=255) gCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGc < 2:1152223/150‑1 (MQ=255) ccTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGCt < 2:1626633/150‑1 (MQ=255) ccTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCGCGCCGAACTGCt > 1:1397853/1‑150 (MQ=255) gAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCcgc > 2:18422/1‑91 (MQ=255) gAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCcgc < 1:18422/91‑1 (MQ=255) cAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGCTTGaccc > 2:312264/1‑149 (MQ=255) cAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGCTTGacca > 1:2896247/1‑150 (MQ=255) aaGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACCCACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGCTTGaccac > 1:47398/1‑150 (MQ=255) ggAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGCTTGACCACCt < 2:2896247/150‑1 (MQ=255) gAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGCTTGACCACCTg > 1:1973942/1‑150 (MQ=255) aaaTGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACCCACCGCTGGAAGGCTATGCCGACCAGCTCCCCGAACTGCTTGACCACCTGc > 2:1137875/1‑150 (MQ=255) tgGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGCTTGACCACCTGCAAAtt < 1:777657/150‑1 (MQ=255) ggCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGCTTGACCACCTGCAAATTGca < 2:1088909/150‑1 (MQ=255) gCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGCTTGACCACCTGCAAATTGcac < 2:830941/150‑1 (MQ=255) gCGGTCAGTTCGTTGGCCTGCCCAACGACTACCGCGTCATCGCCTACGTCATGCTCGGGCAGGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGCTTGACCCCCTGCAAATTGcac < 2:1949486/150‑1 (MQ=255) tCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGa > 2:1489611/1‑120 (MQ=255) tCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGa < 1:1489611/120‑1 (MQ=255) tagtCGTTGGCCAGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCt > 2:159971/4‑91 (MQ=255) tagtCGTTGGCCAGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCt < 1:159971/88‑1 (MQ=255) tagtCGTTGGCCAGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGCTTGACCACCTGCAAATTGCACAAGCCa > 1:111995/4‑150 (MQ=255) gTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGCTTGACCACCTGCAAATTGCACAAGCCAc > 2:856193/1‑150 (MQ=255) ttCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCcgc < 1:1199972/66‑1 (MQ=255) ttCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCcgc > 2:1199972/1‑66 (MQ=255) tCGTTGGCCAGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGAc < 2:1430716/104‑1 (MQ=255) gTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGaa > 2:976838/1‑114 (MQ=255) gTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGaa < 1:976838/114‑1 (MQ=255) ctggccAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGCTTGACCACCTGCAAATTGCACAAGCCACCGTGATCGGc < 1:856193/150‑1 (MQ=255) ctggccAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGCTTGACCACCTGCAAATTGCACAAGCCACCGTGATCGGc < 2:2181200/150‑1 (MQ=255) | CCTTCAAGGAGCGCCCTCCATGATTCAGCCTGTCGCTGAACGCACACCTGCCGGCACCAGCTATCTGGATGTCGGCCAGGGCCAACCCGTG‑GTGCTGATCCACGGCGTGGGCCTGAACAAGGAAATGTGGGGCGGTCAGTTCGTTGGCCTGGCCAACGACTACCGCGTCATCGCCTACGACATGCTCGGCCACGGTCAAAGCCGCGTACCGGCCGCCGACACACCGCTGGAAGGCTATGCCGACCAGCTCGCCGAACTGCTTGACCACCTGCAAATTGCACAAGCCACCGTGATCGGC > NC_002947/4141063‑4141360 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |