| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,156,185 | A→T | 8.3% | L217* (TTA→TAA) | PP_3659 ← | transcriptional regulator, AraC family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,156,185 | 0 | A | T | 8.3% | 287.9 / 11.6 | 93 | L217* (TTA→TAA) | PP_3659 | transcriptional regulator, AraC family |
| Reads supporting (aligned to +/- strand): ref base A (44/41); new base T (5/3); total (49/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 103 total aligned reads displayed.
GGTGGAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGAGGAGGACGC > NC_002947/4156037‑4156334 | ggTGGAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTaa > 2:2029160/1‑150 (MQ=255) gTGGAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTaac > 2:696122/1‑149 (MQ=255) gTGGAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTaac < 2:2746314/150‑2 (MQ=255) aCTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGc < 1:998010/150‑1 (MQ=255) aCTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGAGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGc > 1:1309543/1‑150 (MQ=255) cTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTATTTTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCa < 2:2720475/150‑1 (MQ=255) cTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAACCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTTAAAAGGCa < 1:1062144/150‑1 (MQ=255) aCATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGGGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGaa < 1:1540222/150‑1 (MQ=255) cATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAag < 2:833585/150‑1 (MQ=255) aTGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAaga < 1:2029160/150‑1 (MQ=255) gCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAgaga > 2:814156/1‑150 (MQ=255) tCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGaaa > 1:1205369/1‑150 (MQ=255) aGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACgg < 1:1602389/150‑1 (MQ=255) tCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGc > 2:2559025/1‑150 (MQ=255) gggCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGttt < 1:761078/150‑1 (MQ=255) gggCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGttt < 1:1116146/150‑1 (MQ=255) gggCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGttt < 1:2816654/150‑1 (MQ=255) gCGAGATCATCGAGTTCAGGCCACGTGTGTGAAGAGAGCAGTTCTAAGCGTCGCCGCATCATGATTGTCCTACTTGCGGCGTTACGGTATTTAACAAGGAAGTTACGTGGCGTACCATTTAAAAAGGCAGGAAGAGAAACGGGCGTTTgg < 2:2867867/150‑1 (MQ=255) gCTCATCGAGTGCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGTCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCaaa < 2:1309543/150‑1 (MQ=255) cTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAAc < 2:414532/150‑1 (MQ=255) aTCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCtt > 2:2852323/1‑150 (MQ=255) aTCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCtt > 1:1212458/1‑150 (MQ=255) aTCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACCGGCGTTTGGCAAACCtt > 2:2725555/1‑150 (MQ=255) tCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCg > 2:2029868/1‑136 (MQ=255) tCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCg < 1:2029868/136‑1 (MQ=255) tCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTg > 2:1726008/1‑150 (MQ=255) cAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCa < 2:2794100/150‑1 (MQ=255) gCCACGTGTGTGGAGAGAGTAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGaa > 1:2358684/1‑150 (MQ=255) gCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGttt > 1:916726/1‑129 (MQ=255) aCGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGttt < 2:1067549/126‑1 (MQ=255) aCGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGttt > 1:1067549/1‑126 (MQ=255) aCGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGt > 2:1019013/1‑124 (MQ=255) aCGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGt < 1:1019013/124‑1 (MQ=255) tgtgGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTAATGTCTGAGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCtcttc > 1:2382583/1‑150 (MQ=255) tgGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTtctc < 2:1205369/150‑1 (MQ=255) gagagaGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGa > 1:1408177/1‑150 (MQ=255) gagagaGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGa > 1:976064/1‑150 (MQ=255) gagagaGCAGTTTTAATAGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGa > 2:2932846/1‑150 (MQ=255) agCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAgaga < 1:1020737/101‑1 (MQ=255) agCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAgaga > 2:1020737/1‑101 (MQ=255) aGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCg > 1:732714/1‑150 (MQ=255) ttttAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTAAGCCAGAAAGTGCTTCTCGAACACAGCGGa > 2:1478729/1‑150 (MQ=255) ttAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAgg < 1:2868924/150‑1 (MQ=255) aaTCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTTAAAAGGCacg > 1:238036/1‑84 (MQ=255) aaTCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTTAAAAGGCacg < 2:238036/86‑3 (MQ=255) aTCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGc > 2:2855971/1‑118 (MQ=255) aTCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGc < 1:2855971/118‑1 (MQ=255) ccgccgGATCATAATGCTCGTACTGTCCTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTAc < 1:2466665/112‑1 (MQ=255) ccgccgGATCATAATGCTCGTACTGTCCTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTAc > 2:2466665/1‑112 (MQ=255) tAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTaaaaa > 2:1319852/1‑64 (MQ=255) tAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTaaaaa > 2:1319796/1‑64 (MQ=255) tAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTaaaaa < 1:1319852/64‑1 (MQ=255) tAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTaaaaa < 1:1319796/64‑1 (MQ=255) tAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTa > 2:1172451/1‑60 (MQ=255) tAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTa < 1:1172451/60‑1 (MQ=255) tGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGa > 2:2221244/1‑150 (MQ=255) gCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCCGGCGAAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGAt < 1:1726008/150‑1 (MQ=255) gCTCGTACTGTCGTCGTTACGGTATTTAACAAGGAGATTGACTGCAGTTGCTCTTTACAGGACAGGAAGAGAAAGGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGAt > 1:837698/1‑150 (MQ=255) gTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTAGCtttac > 1:517764/1‑148 (MQ=255) aCTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTc > 1:2274349/1‑150 (MQ=255) cTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTAt > 2:438323/1‑127 (MQ=255) cTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTAt < 1:438323/127‑1 (MQ=255) cTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTca > 2:2766454/1‑150 (MQ=255) gtcgtTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACggg > 2:1666591/1‑66 (MQ=255) gtcgtTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACggg < 1:1666591/66‑1 (MQ=255) tcgtTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAg > 1:230437/1‑150 (MQ=255) cgtTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAgc < 1:814156/150‑1 (MQ=255) ttACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAgcgc > 2:125520/1‑150 (MQ=255) ggTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAaga > 1:811033/1‑50 (MQ=255) ggTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAaga < 2:811033/50‑1 (MQ=255) ggTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGc < 1:1020446/59‑1 (MQ=255) ggTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGc > 2:1020446/1‑59 (MQ=255) tttCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATa > 1:888188/1‑150 (MQ=255) acaAGGAAGTTACTTTGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTc > 2:1416649/1‑128 (MQ=255) acaAGGAAGTTACTTTGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTc < 1:1416649/128‑1 (MQ=255) aaGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCt > 2:2980644/1‑150 (MQ=255) aaGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCt > 2:2265849/1‑150 (MQ=255) gAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTgtc < 2:1212458/150‑1 (MQ=255) gTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAg > 2:2476407/1‑91 (MQ=255) ttACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCt < 1:1180941/118‑1 (MQ=255) ttACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCt > 2:1180941/1‑118 (MQ=255) ttcctGCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGc > 1:293753/5‑150 (MQ=255) ttcctGCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCACTTCTCGAACACAGCGGAGGTTTTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCTATAGTCGCTGTCGTCCAccaga > 2:646026/5‑147 (MQ=255) gTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCACCACTTGGTTGCCAGAGAGCTCTGTTCGAACCCAGAGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTga < 1:691493/150‑1 (MQ=255) gTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAAcaca < 2:2073100/75‑1 (MQ=255) gTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAAcaca > 1:2073100/1‑75 (MQ=255) gTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTga < 1:1478729/150‑1 (MQ=255) gTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACAATGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTga < 1:2637066/150‑1 (MQ=255) ctGCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTga < 2:293753/149‑1 (MQ=255) tGCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTgag > 1:1613094/1‑150 (MQ=255) gCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGc > 2:1136186/1‑90 (MQ=255) accTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGc < 1:1136186/89‑1 (MQ=255) ttttAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCtcttc < 1:1504815/61‑1 (MQ=255) ttttAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCtcttc > 2:1504815/1‑61 (MQ=255) ttttAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGaggagg > 1:2472076/1‑150 (MQ=255) ttttAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGaggagg > 1:2603901/1‑150 (MQ=255) ttttAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGaggagg < 1:696122/150‑1 (MQ=255) tttAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGAggagga > 1:1886045/1‑150 (MQ=255) tttAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGAggagga < 1:2852323/150‑1 (MQ=255) aaaaaGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGAGGAGGACGc > 2:583851/1‑150 (MQ=255) | GGTGGAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGAGGAGGACGC > NC_002947/4156037‑4156334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |