| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 326,070 | T→G | 6.6% | A555A (GCA→GCC) | PP_0269 ← | glutamate synthase large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 326,070 | 0 | T | G | 6.6% | 304.2 / 10.8 | 106 | A555A (GCA→GCC) | PP_0269 | glutamate synthase large subunit |
| Reads supporting (aligned to +/- strand): ref base T (53/46); new base G (3/4); total (56/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01 | |||||||||||
Only 100 of 107 total aligned reads displayed.
CGATCAAGCTGCGTAGCTCGTTCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCGCTTTCGATCGAGCCACTGAGTAACTCACCTGGTT > NC_002947/325921‑326218 | cGATCAAGCTGCGTAGCTCGTTCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGCCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTAt < 2:1397405/150‑1 (MQ=255) aaGCTGCGTAGCTCGTTCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCgg > 1:2901408/1‑150 (MQ=255) aaGCTGCGTAGCTCGTTCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCgg > 1:1052048/1‑150 (MQ=255) gCTGCGTAGCTCGTTCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGCCGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCgggg > 2:13652/1‑150 (MQ=255) gCTGCGTAGCTCGTTCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCg > 2:471342/1‑147 (MQ=255) gCTGCGTAGCTCGTTCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCg < 1:471342/147‑1 (MQ=255) gCTGCGTAGCTCGTTCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAACTCCGCGTATTCGTAGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCATAGGCCgggg < 2:1864060/150‑1 (MQ=255) gCGTAGCTCGTTCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTg > 2:2592787/1‑150 (MQ=255) cGTAGCTCGTTCTTGCGTACCAACATCGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGt < 1:2310601/150‑1 (MQ=255) tAGCTCGTTCTTTCATACCAACAACGTCGTGCAGCATAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTTGAGTACCCGCTCAGCATCTTCTTATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGttt < 1:1516436/150‑1 (MQ=255) cTCGTTCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCtt > 2:2664656/1‑150 (MQ=255) cTCGTTCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCtt > 2:731121/1‑150 (MQ=255) cTCGTTCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCtt > 1:2127423/1‑150 (MQ=255) tCGTTCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCATAGGCCGGGGCTGttcgata < 1:220050/150‑6 (MQ=255) cGTTCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCtttt < 2:1052048/150‑1 (MQ=255) gTTCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTc > 2:1689436/1‑150 (MQ=255) ttCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCg > 1:1764877/1‑150 (MQ=255) tCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGt < 1:351723/140‑1 (MQ=255) tCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGt > 2:351723/1‑140 (MQ=255) tCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCgg < 1:1689436/150‑1 (MQ=255) cGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAAc > 1:277972/1‑150 (MQ=255) ccAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTGGGCGAACGGtt > 1:229523/1‑150 (MQ=255) aacaacGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTg < 1:2993154/128‑1 (MQ=255) aacaacGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTg > 2:2993154/1‑128 (MQ=255) acaacGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTc < 2:466274/131‑1 (MQ=255) acaacGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTc > 1:466274/1‑131 (MQ=255) acaacGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACt > 2:2032881/1‑150 (MQ=255) acaacGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACt > 2:915645/1‑150 (MQ=255) acaacGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACt > 1:1895507/1‑150 (MQ=255) aacGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGt > 1:2369301/1‑150 (MQ=255) acGCCGTGCAGCAGAAAGGGTAGAAGGGCGACGGCAACGGAGTCCGCGTATTCTTCGAGTACCCGATCAGCATCTTCCGATTCTGCTCGGA‑GGTATCGAACAGCCCCGTCCTATGCCGGGGGTGTTTCTTTTCGTCGAACGGTTACTGtt < 2:229523/150‑1 (MQ=255) gTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGc > 1:887586/1‑150 (MQ=255) tGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGcg < 2:2107186/150‑2 (MQ=255) cagcagAACGGTTACAACGACGGCGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCgg > 1:1710996/1‑150 (MQ=255) gcagAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGgcg > 2:2832597/1‑150 (MQ=255) aaCGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTgg < 2:1323995/150‑1 (MQ=255) aaCGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTgg < 1:915645/150‑1 (MQ=255) cGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGc < 1:2466886/150‑1 (MQ=255) ttACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTa > 1:1886671/1‑150 (MQ=255) ttACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTa < 2:2305795/150‑1 (MQ=255) ttACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTa > 2:2781370/1‑150 (MQ=255) aCAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACg > 1:2000515/1‑150 (MQ=255) aaCGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGt > 1:2258718/1‑150 (MQ=255) acgacgacgGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGTGCTTACGGtc > 1:2661568/1‑150 (MQ=255) acgacgGCAACGAAGTGTGGTTATTCTTTGTGCACTCGATCAGCATCTTCTGATTCTGATCTGAGTGAAGC‑TAGAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTcc < 1:2360878/150‑1 (MQ=255) acgGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGt < 2:2488217/150‑1 (MQ=255) cgGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTg < 1:2592787/150‑1 (MQ=255) aaCGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACt < 2:1857953/112‑1 (MQ=255) aaCGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACt < 1:2905536/112‑1 (MQ=255) aaCGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACt > 1:1857953/1‑112 (MQ=255) aaCGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCATAGGCCg < 2:197341/83‑1 (MQ=255) aaCGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCATAGGCCg > 1:197341/1‑83 (MQ=255) aaCGAAGCCCGTGTCCTCGTCCAGTCCCCGATCAGCATCTTCTGATCCTCATCTTG‑TACATCGAGGACCTTCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCaaa < 1:2664656/150‑1 (MQ=255) cgcgTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGCACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCt > 2:125503/1‑150 (MQ=255) cgcgTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTgg < 2:1293745/120‑1 (MQ=255) cgcgTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTgg > 1:1293745/1‑120 (MQ=255) cgcgTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGc < 2:328428/138‑1 (MQ=255) cgcgTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGc > 1:328428/1‑138 (MQ=255) cgcgTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCAGTACTGA‑GGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCt > 2:2410724/1‑150 (MQ=255) cgcgTATTCGTCGAGTACCAGATCAGCATCGGCTGATTCTTATCTGA‑GGTAGCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCt > 1:848088/1‑150 (MQ=255) tcgAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATc < 2:2000515/150‑1 (MQ=255) gAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCa < 2:1549586/146‑1 (MQ=255) gAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCa > 1:1549586/1‑146 (MQ=255) gAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCg < 2:277972/150‑1 (MQ=255) gTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGcc < 2:2258718/150‑1 (MQ=255) ccGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGt < 1:1372156/118‑1 (MQ=255) ccGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGt > 2:1372156/1‑118 (MQ=255) ccGATCAGCATCTTCTGATGCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACAt > 2:906678/1‑150 (MQ=255) tCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCcgc < 2:708706/150‑1 (MQ=255) aGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCgcgc > 2:2786624/1‑150 (MQ=255) cATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTgg < 2:1988271/94‑1 (MQ=255) ttctgattctgaTCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATaaaa < 2:887586/150‑1 (MQ=255) tctgattctgatCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATaaatc < 2:2901408/150‑3 (MQ=255) tctgattctgatCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAAc > 2:2489073/1‑150 (MQ=255) ctgattctgatCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCa < 1:2862336/143‑1 (MQ=255) ctgattctgatCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCa > 2:2862336/1‑143 (MQ=255) gattctgatCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAACGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCg > 1:1423524/1‑150 (MQ=255) gattctgatCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCg > 2:1481521/1‑150 (MQ=255) tgatctga‑tGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCGCTTtc > 2:2371686/1‑150 (MQ=255) tgatctga‑tGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCGCTTtc > 2:2583886/1‑150 (MQ=255) gatctga‑tGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCGCTTtcg < 2:1838384/150‑1 (MQ=255) atctga‑tGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTAc > 1:2910017/1‑85 (MQ=255) atctga‑tGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTAc < 2:2910017/85‑1 (MQ=255) atctga‑tGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCGCTTtcga < 1:2781370/150‑1 (MQ=255) ga‑tGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCGCTTtcgatcga < 1:2786624/150‑1 (MQ=255) a‑tGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCGCTTTCGATCGAg > 2:2876770/1‑150 (MQ=255) gTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCAATCCGCCACATCCGCGCATAAAACTCGCTTTCGATCGAGcc > 2:3020673/1‑150 (MQ=255) gAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACCTCCGCGCATAAAGCTCGCTTTCGAACGAGACACTGa < 2:1895507/150‑1 (MQ=255) gAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATc < 1:178060/116‑1 (MQ=255) gAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATc > 2:178060/1‑116 (MQ=255) gAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCGCTTTCGATCGAGCCACTGa < 1:2032881/150‑1 (MQ=255) cAGCCCCGGCATAGGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCGc > 1:949346/1‑129 (MQ=255) ccccGGCCTATGGCGGGGCTGTTTCTTTTCGGTGAACGGTTACTGTTTGAGACGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCAGAAAACTCGTTTTCGATCGAGCCACTGAGTAACt > 1:950580/1‑150 (MQ=255) ccccGGCATAGGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCGGGCGCTGGGCTTACGGTCGCGGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCGCTTTCGATCGAGCCACTGAGTAACt > 1:1464069/1‑150 (MQ=255) cTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCGCTTTCGATCGAGCCACTGAGTAACTCACCTgg > 2:2922778/1‑150 (MQ=255) cTATGACGGGGCTGTTTTTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTCCGGCCTGGGATTCGAAGCTGTCCCTACGCGCCCTCCCCCCCATCCTCGCTTACCACGCGCTTTTGATCGAGCCACTGAGTAACTCACCTgg < 1:2226684/150‑1 (MQ=255) tATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCGCTTTCGATCGAGCCACTGAGTAACTCACCTGGt < 1:2876770/150‑1 (MQ=255) aTGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCGCTTTCGATCGAGCCACTGAGTAACTCACCTGGtt < 2:2127423/150‑1 (MQ=255) aTGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCGCTTTCGATCGAGCCACTGAGTAACTCACCTGGt < 2:566265/149‑1 (MQ=255) aTGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCGCTTTCGATCGAGCCACTGAGTAACTCACCTGGt > 1:566265/1‑149 (MQ=255) | CGATCAAGCTGCGTAGCTCGTTCTTGCGTACCAACAACGCCGTGCAGCAGAACGGTTACAACGACGACGGCAACGAAGTCCGCGTATTCGTCGAGTACCCGATCAGCATCTTCTGATTCTGATCTGA‑TGTATCGAACAGCCCCGGCCTATGCCGGGGCTGTTTCTTTTCGGCGAACGGTTACTGTTTGAGCCGGCGCTGGGCTTACGGTCTCCGGTGCAAAGCTGTCGCTACGCGCCATCCGCCACATCCGCGCATAAAACTCGCTTTCGATCGAGCCACTGAGTAACTCACCTGGTT > NC_002947/325921‑326218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |