| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,165,672 | A→G | 6.2% | P158P (CCT→CCC) | PP_3666 ← | MHS family metabolite MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,165,672 | 0 | A | G | 6.2% | 433.2 / 12.5 | 145 | P158P (CCT→CCC) | PP_3666 | MHS family metabolite MFS transporter |
| Reads supporting (aligned to +/- strand): ref base A (72/64); new base G (3/6); total (75/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.87e-01 | |||||||||||
Only 100 of 146 total aligned reads displayed.
CCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCAGAAGGTGGA > NC_002947/4165524‑4165821 | ccgccAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCATGATGCTGGTGTACAAGCCACGCCGCCCAg < 2:323412/150‑1 (MQ=255)ccgccAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAg > 1:2100977/1‑150 (MQ=255) ccAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCTCGACGAAAGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAggcg > 1:981706/1‑150 (MQ=255) cagGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCGCGCCGCCTGGgcggcgt < 1:1248472/150‑2 (MQ=255) gAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGCTGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTa > 1:539004/1‑150 (MQ=255) aaCGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTAc > 2:1975415/1‑150 (MQ=255) aCGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCGCGCCGCCTGGgcggcgtggctt < 2:2793964/150‑7 (MQ=255) aCGGCAGGCGCCAGCCCCACTCATGCAGGGATTCACTACTCGGCAGCTGATGCAGCACCGCGACGAACGCCGCACCGAACTACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTCGTGTACAAGCCACGCCGCCTGGgcggcgtggctt < 1:28861/150‑7 (MQ=255) cAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGc < 1:741796/150‑1 (MQ=255) cAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGc < 2:852098/150‑1 (MQ=255) gcgcCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAg > 2:1849439/1‑150 (MQ=255) gcgcCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAg < 2:3056533/150‑1 (MQ=255) cgcCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCTGGgcggcgtgg < 1:1174022/139‑4 (MQ=255) ccAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCTGGgcggcgt < 1:2549953/135‑2 (MQ=255) ccAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCTGGgcggcgt > 2:2549953/1‑134 (MQ=255) aGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGaatg < 2:2659103/150‑3 (MQ=255) cACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCg < 1:1255073/150‑1 (MQ=255) aCTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCgg > 2:1098796/1‑150 (MQ=255) tGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCg > 1:304787/1‑150 (MQ=255) cAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCGCGCCGCCTGGgcggcgtggctt > 1:2441248/1‑119 (MQ=255) cAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCGCGCCGCCTGGgcggcgtggctt < 2:2441248/125‑7 (MQ=255) ttCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTc > 2:1771122/1‑150 (MQ=255) ttCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTAGTGTACAAGCGACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGGCCCGGCGTACTc > 1:778198/1‑150 (MQ=255) ctgctgAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCAccc < 1:1771122/150‑1 (MQ=255) tgctgAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCg > 2:1944083/1‑150 (MQ=255) tgAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAgg > 2:1793213/1‑150 (MQ=255) gAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCAGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAgac > 1:501470/1‑148 (MQ=255) agcTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGaa < 1:1944083/150‑1 (MQ=255) gcTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAAc < 1:2633056/116‑1 (MQ=255) gcTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAAc > 2:2633056/1‑116 (MQ=255) cTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGc > 2:1080388/1‑120 (MQ=255) cTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGc < 1:1080388/120‑1 (MQ=255) cTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGaaaa > 1:973297/1‑150 (MQ=255) tCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAAc > 1:960745/1‑150 (MQ=255) tCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAAc < 1:2639337/150‑1 (MQ=255) aTGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAAccc > 2:2497922/1‑150 (MQ=255) tGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAAcccc > 2:614060/1‑150 (MQ=255) tGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCAGAACAGGTCGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAAcccc > 1:997293/1‑150 (MQ=255) cagcaCCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTg < 1:337685/150‑1 (MQ=255) caCCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTAc > 1:2613248/1‑150 (MQ=255) cgccgaACCCCGCACGCAATAACCCCCCCGCCGCCGTGCTGGCCGGCACGATCGTGGTTGACACGCGCCGAGGCCCAGCCTCCGCGAACTCGTCCATGAACGCACTCTCCCCTTCGTACCCCTCCGAGGCGGAAAACACCTGTACCACGc < 2:175454/147‑1 (MQ=255) cgacgaACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGGCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGc > 2:2152065/1‑150 (MQ=255) gacgaACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCg > 1:2357558/1‑150 (MQ=255) cgaACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGa < 2:2622378/150‑1 (MQ=255) aCGCCGTACCGAGCAACACCCCCGACGCCGTGCTGGCAGGCACGATGCTGGTGTACAAGCCCCCGCGCCCAGGCGGCGCGTGCTCGGCGAGGAACGCAGCGGCCTCGGCGTACTCAGCCGAGGCGGAAAACCCCTGTACCAGGCGGATca < 2:501470/150‑1 (MQ=255) aCGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGTGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATca < 1:1975415/150‑1 (MQ=255) aCGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATca < 1:1098796/150‑1 (MQ=255) gccgcACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATcagc < 2:1576116/150‑1 (MQ=255) gccgcACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATcagc < 1:1646033/150‑1 (MQ=255) cACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATcagcaaca < 2:973297/150‑1 (MQ=255) aacaacaacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAg > 2:1430268/1‑150 (MQ=255) acaacaacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGaa > 1:1544790/1‑116 (MQ=255) acaacaacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTg > 2:1287848/1‑124 (MQ=255) acaacaacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTg < 1:1287848/124‑1 (MQ=255) acaacaacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAgg < 1:1018407/150‑1 (MQ=255) aacaacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGc > 1:1314971/1‑83 (MQ=255) aacaacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGc < 2:1314971/83‑1 (MQ=255) aacaacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGcc > 2:1254163/1‑150 (MQ=255) acaacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCg > 1:2572402/1‑150 (MQ=255) acaacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCg > 1:1185974/1‑150 (MQ=255) aacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGt < 2:198112/150‑1 (MQ=255) aacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGt > 1:524386/1‑150 (MQ=255) acCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTg > 2:2165162/1‑150 (MQ=255) ccgccgccgTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTa > 2:2275876/1‑61 (MQ=255) ccgccgccgTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTa < 1:2275876/61‑1 (MQ=255) ccgccgTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCcaca < 1:1019946/150‑1 (MQ=255) cgccgTGCTGGCCGGCACGATGCTGGTTTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAg < 1:2165162/150‑1 (MQ=255) tcgTGCCGGCCAGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGAt < 1:2395297/120‑1 (MQ=255) tcgTGCCGGCCAGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGAt > 2:2395297/2‑121 (MQ=255) ccgTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATca > 2:1487016/1‑123 (MQ=255) ccgTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATca < 1:1487016/123‑1 (MQ=255) ccgTGCTGGCCGACACGATGCTGGTGTGCAAGCCAAGCCGACCAGGCGGGGCGGACTCGGCCAGGAACGCAGCGGCCCTGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGcc < 2:539004/150‑1 (MQ=255) gCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGAt < 2:2572402/150‑1 (MQ=255) cTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATc > 2:1058686/1‑150 (MQ=255) tGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCt > 2:2363744/1‑150 (MQ=255) gCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCgg > 1:2739513/1‑111 (MQ=255) gCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCgg < 2:2739513/111‑1 (MQ=255) gATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGcc > 2:362378/1‑150 (MQ=255) gCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCg > 2:1558127/1‑61 (MQ=255) gCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCg < 1:1558127/61‑1 (MQ=255) gCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCgg > 1:2252799/1‑150 (MQ=255) tGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGCCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGAt < 2:289015/133‑1 (MQ=255) tGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGCCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGAt > 1:289015/1‑133 (MQ=255) ggTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGcaa < 2:978215/150‑1 (MQ=255) tACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATcag > 1:2239492/1‑98 (MQ=255) tACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATcag < 2:2239492/98‑1 (MQ=255) aaGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTgc < 2:1312729/129‑1 (MQ=255) aaGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTgc > 1:1312729/1‑129 (MQ=255) aaGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCg > 2:677877/1‑150 (MQ=255) aaGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCg > 2:879984/1‑150 (MQ=255) aaGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACAAGGCAGAACAGCAAAAGAACGGCGGGTGGGGAAAGAGCGAGCTGCACAGAGTCCGTCAACAAGCCg > 2:2639130/1‑150 (MQ=255) aGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGa < 1:2497922/150‑1 (MQ=255) aCGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCa > 2:308757/1‑150 (MQ=255) gccgccCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCAGa > 1:2301511/1‑150 (MQ=255) gccCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGcaacaa < 2:1179168/136‑1 (MQ=255) cccAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCAGAAGGt < 2:1185974/150‑1 (MQ=255) ccAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCAGAAGGTg < 2:2669112/150‑1 (MQ=255) ccAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCAGAAGGTg < 1:578336/150‑1 (MQ=255) ccAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCAGAAGGTg < 1:2670444/150‑1 (MQ=255) cAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATca > 1:322448/1‑81 (MQ=255) | CCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACAGCCCGATCTGCGCATAGCCCGGCAACAAGCCGATGCAGAAGGTGGA > NC_002947/4165524‑4165821 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |