| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,316,066 | A→C | 9.8% | A35A (GCA→GCC) | PP_3788 → | non‑ribosomal peptide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,316,066 | 0 | A | C | 9.8% | 340.0 / 25.3 | 130 | A35A (GCA→GCC) | PP_3788 | non‑ribosomal peptide synthetase |
| Reads supporting (aligned to +/- strand): ref base A (64/53); new base C (6/7); total (70/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 133 total aligned reads displayed.
ATCAGGGAATCAGTCTCGTACGCCACACAGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGCAACTGCGCTATCCCGTCGTTGT > NC_002947/4315919‑4316215 | atcaGGGAATCAGTCTCGTACGCCACACAGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTAGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGc > 1:334929/1‑150 (MQ=255) gggAATCAGTCTCGTACGCCACACAGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCTGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCa > 1:2665030/1‑150 (MQ=255) ggAATCAGTCTCGTACGCCACACAGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCCGCTGCAt > 2:2670091/1‑150 (MQ=255) aTCAGTCTCGTACGCCACACAGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTcg < 1:901949/150‑1 (MQ=255) aTCAGTCTCGTACGCCACACAGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTcg < 2:2964937/150‑1 (MQ=255) tCAGTCTCGTACGCCACACAGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCGTCGAATGCCGCTGCATTcga < 1:76874/150‑1 (MQ=255) taGTCTCGTACGCCACAAAGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCCGCTGCATTcgat < 2:962785/149‑2 (MQ=255) tctcGTACGCCACACAGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAg < 1:2600326/150‑1 (MQ=255) tcGTACGCCACACAGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCCGCTGCATTcgatgg < 1:3072215/147‑4 (MQ=255) tcGTACGCCACACAGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCCGCTGCATTcgatgg > 2:3072215/1‑144 (MQ=255) ccACACAGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAgcgc < 1:1042903/150‑1 (MQ=255) cacacaGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCt > 2:1529270/1‑150 (MQ=255) cacacaGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCt > 2:1300121/1‑150 (MQ=255) acacaGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCtt > 1:343089/1‑150 (MQ=255) aGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGAcc < 1:905000/150‑1 (MQ=255) cAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCCGCTGCATTcgatgg > 1:477619/1‑129 (MQ=255) aGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACa < 2:2394475/150‑1 (MQ=255) ggAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTcga‑cga < 1:613036/129‑1 (MQ=255) ggAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTcga‑cga > 2:613036/1‑129 (MQ=255) cagcaTGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACt > 2:2559603/1‑150 (MQ=255) gcaTGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTaa < 2:2842086/150‑1 (MQ=255) gcaTGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTaa < 1:1300121/150‑1 (MQ=255) aaCCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATc < 1:1529270/150‑1 (MQ=255) cAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCGTCCACCGCTACCCATCCATTCCAACAGTA‑GCGAGCTGAGTCCAGCGCTTGACCTACAGCGAACTAAGGATCGaa > 1:2215606/1‑150 (MQ=255) tACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTGCCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTca < 2:830748/150‑1 (MQ=255) tACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTca < 2:2313505/150‑1 (MQ=255) tACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTca < 2:343089/150‑1 (MQ=255) aCGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTg > 1:2359948/1‑150 (MQ=255) gATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCa > 1:1730148/1‑150 (MQ=255) gATCACGGGAGGGACTGCCTACCCCGTGCACTTCTCGCGGGGCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCa > 1:593317/1‑150 (MQ=255) cGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTc < 1:316027/150‑1 (MQ=255) gggAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCg > 2:617021/1‑150 (MQ=255) gggAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CAAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCt > 2:2965912/1‑148 (MQ=255) aGGGCCTGCCTACACCGTGCACTTCTCGCTGGTCGAATACGTCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCt > 2:966131/1‑150 (MQ=255) gcctgcctACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCa < 2:1730148/150‑1 (MQ=255) gcctgcctACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCa > 1:706943/1‑150 (MQ=255) ctgcctACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTcga‑c > 1:1929890/1‑83 (MQ=255) ctgcctACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTcga‑c < 2:1929890/83‑1 (MQ=255) tACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGAt > 1:1009828/1‑113 (MQ=255) tACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGAt < 2:1009828/113‑1 (MQ=255) tACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGaa < 1:764337/117‑1 (MQ=255) cccGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTTACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGc > 2:3447/1‑150 (MQ=255) cccGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTAc > 2:2929480/1‑96 (MQ=255) cccGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTAc < 1:2929480/96‑1 (MQ=255) ccGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCg > 2:960034/1‑150 (MQ=255) cGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCAt > 1:39774/1‑139 (MQ=255) cGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCAt < 2:39774/139‑1 (MQ=255) cGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGt < 1:275747/150‑1 (MQ=255) tGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTGCCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTgc > 2:2377644/1‑150 (MQ=255) cTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAg > 1:614566/1‑150 (MQ=255) ttCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATc < 1:1482835/102‑1 (MQ=255) ttCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATc > 2:1482835/1‑102 (MQ=255) ttCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGaa < 2:590149/135‑1 (MQ=255) cTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGAt > 1:2587498/1‑150 (MQ=255) tGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTgc > 1:2026493/1‑138 (MQ=255) gTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGAtgtg < 2:719074/150‑1 (MQ=255) tCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCt > 1:1690484/1‑100 (MQ=255) tCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCAt < 2:1018278/122‑1 (MQ=255) tCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCAt > 1:1018278/1‑122 (MQ=255) tCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTgg > 1:1079441/1‑150 (MQ=255) gAATACATCGAGCGTATCATCCCCCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCg < 2:673345/127‑1 (MQ=255) gAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCg > 1:673345/1‑127 (MQ=255) gAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGtt < 1:684832/150‑1 (MQ=255) gaCATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGAGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCg < 1:213285/149‑1 (MQ=255) aCATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCgg > 2:1932268/1‑150 (MQ=255) cATCGAGCGTATCATCCACCGCTGCCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGt < 1:2377644/150‑1 (MQ=255) aTCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTg > 1:2327795/1‑150 (MQ=255) tCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTgg < 1:2534865/141‑1 (MQ=255) tCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTgg > 2:2534865/1‑141 (MQ=255) gAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCgg > 2:2727300/1‑131 (MQ=255) gAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCgg < 1:2727300/131‑1 (MQ=255) aGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATg < 2:1079441/150‑1 (MQ=255) tATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGAc > 2:2410754/1‑150 (MQ=255) atcCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTg < 2:2327795/150‑1 (MQ=255) tcCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTg < 2:310640/132‑1 (MQ=255) tcCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGc > 1:1332336/1‑150 (MQ=255) tcCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGc > 2:867132/1‑150 (MQ=255) aCCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGCCAc > 2:700318/1‑150 (MQ=255) aCCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGCAAc > 2:2362632/1‑150 (MQ=255) aCCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGAATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGCAAc > 2:82890/1‑150 (MQ=255) cGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATg > 1:3054363/1‑136 (MQ=255) cGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGCAACTg > 1:2901180/1‑150 (MQ=255) cTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACTCCCCCTCAACCAGTTTCTTGCTGATGATCGAACTGGTCATACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGCAACTgcg > 1:2066477/1‑150 (MQ=255) aCCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGt > 2:1608107/1‑127 (MQ=255) tcgtCGAATGCCGCTGCATTCGA‑TGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCAt > 2:376408/4‑90 (MQ=38) tcgtCGAATGCCGCTGCATTCGA‑TGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCAt < 1:376408/87‑1 (MQ=38) tcgtCGAATGCCGCTGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGCaa > 1:2976686/4‑141 (MQ=255) tcgtCGAATGCCGCTGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGCaa < 2:2976686/138‑1 (MQ=255) tcgtCGAATGCCGCTGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAACGCGACAGTGCAACTGCGCTAt > 2:2225615/4‑150 (MQ=255) ccATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGCAACTGCGCTAt < 1:1503639/150‑1 (MQ=255) cATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAAc < 2:2687742/51‑1 (MQ=255) cATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAAc > 1:2687742/1‑51 (MQ=255) aTCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGAAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGCAACTGCGCTATcc > 1:2957508/1‑150 (MQ=255) tCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCACGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGCAACTGCGCTATccc > 1:1417181/1‑150 (MQ=255) aaTGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGCAACTGCGCTATCCcgtc < 2:2804795/150‑1 (MQ=255) gCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGCAACTGCGCTATCCCGTCGtt < 1:82890/150‑1 (MQ=255) gCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGCAACTGCGCTATCCCGTCGtt > 2:1332075/1‑150 (MQ=255) aGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGAt < 2:1673936/48‑1 (MQ=255) aGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGAt > 1:1673936/1‑48 (MQ=255) aGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGCAACTGCGCTATCCCGTCGTTGt < 1:914536/150‑1 (MQ=255) | ATCAGGGAATCAGTCTCGTACGCCACACAGCAAGGAGCGCAGCATGAACCAGGCATTACTGACGATCACGGGAGGGCCTGCCTACCCCGTGCACTTCTCGCTGGTCGAATACATCGAGCGTATCATCCACCGCTACCCATCGAATGCAGCGGCATTCGA‑CGAGGACCAGCGCTTGACCTACAGCGAACTAAGGATCGAACTGCTCACACTGCACGCTCGGCTGCATGAACTCGGCGTGCGCAGCGGGGATGTGGTTGCGGTGAATGCGACAGTGCAACTGCGCTATCCCGTCGTTGT > NC_002947/4315919‑4316215 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |