| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,512,506 | C→A | 6.5% | G9V (GGT→GTT) | lolA ← | outer membrane lipoprotein carrier protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,512,506 | 0 | C | A | 6.5% | 421.4 / 9.5 | 131 | G9V (GGT→GTT) | lolA | outer membrane lipoprotein carrier protein |
| Reads supporting (aligned to +/- strand): ref base C (62/60); new base A (5/4); total (67/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
Only 100 of 132 total aligned reads displayed.
TCTGCGACTTTTCCAGCAACTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGACTCGATCATGCGCGCGGCACGGTTGTAGCCGATCTTCAG > NC_002947/4512357‑4512653 | tCTGCGACTTTTCCAGCAACTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCAc > 1:900495/1‑150 (MQ=255) tGCGACTTTTCCAGCAACTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCg > 2:933439/1‑150 (MQ=255) gCGACTTTTCCAGCAACTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGt > 1:1197242/1‑150 (MQ=255) gACTTTTCCAGCAACTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTg > 1:1732061/1‑150 (MQ=255) gACTTTTCCAGCAACTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTg > 2:1929114/1‑150 (MQ=255) gACGTTTCCAGCAACTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCCTTGAAAAGGCCTGGCGCCACCGTTg < 1:267788/150‑1 (MQ=255) tttCCAGCAACTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACGGCGTGCGAATCGCGCGGAGGGGAAGGGTGGGGGGGGGTTGAAAAGGCCTGGCGCCACCGTTGgcgc < 1:1495240/150‑1 (MQ=255) ttCCAGCAACTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCAACGGTGGCGcc > 1:2587408/1‑150 (MQ=255) ttCCAGCAACTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCAACGGTGGCGcc < 2:2587408/150‑1 (MQ=255) ccAGCAACTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCcag < 2:699863/150‑1 (MQ=255) ccAGCAACTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCGCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCcag < 1:538304/150‑1 (MQ=255) cAGCAACTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCcagg > 2:152040/1‑150 (MQ=255) aGCAACTGGGTCAGGCGTTGTACGTCTTTCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCcaggc > 1:84357/1‑150 (MQ=255) aGCAACTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCcaggc > 1:2537660/1‑150 (MQ=255) aaCTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAGCAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCcaggcagg < 1:1145432/150‑1 (MQ=255) cTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGgt < 2:1218871/150‑1 (MQ=255) tGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGgtg > 1:2306719/1‑150 (MQ=255) gggTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGTGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGgtgt < 1:39620/150‑1 (MQ=255) ggTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGtt > 1:183840/1‑150 (MQ=255) gTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCAAACGAAACGCTTGCATTGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTtc > 1:1907862/1‑150 (MQ=255) tCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTtca > 1:2778156/1‑150 (MQ=255) tCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTtca > 2:2082494/1‑150 (MQ=255) aGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCca < 1:1930268/135‑1 (MQ=255) aGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCca > 2:1930268/1‑135 (MQ=255) ggCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTtcat‑ca < 1:1245414/150‑1 (MQ=255) gTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTTAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTcg‑cg > 2:430082/1‑150 (MQ=255) tACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTcg‑cgc > 2:62827/1‑150 (MQ=255) gTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCggg > 2:2375035/1‑150 (MQ=255) gTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCggg < 2:2467352/150‑1 (MQ=255) ttGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGgccg > 1:118458/1‑150 (MQ=255) gCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGgccgcc > 1:1759317/1‑150 (MQ=255) cTCACCGGCATAATCAGTAACCGAGACCCGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGccc < 2:1922584/150‑1 (MQ=255) tCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCg > 2:2961714/1‑150 (MQ=255) tCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCAACGGTGGCGCcag > 1:1800357/1‑118 (MQ=255) tCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCAACGGTGGCGCcag < 2:1800357/118‑1 (MQ=255) cACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCgg < 2:1641737/150‑1 (MQ=255) aCCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGtt > 1:1866493/1‑126 (MQ=255) aCCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGtt < 2:1866493/126‑1 (MQ=255) aCCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCggg < 2:2306719/150‑1 (MQ=255) gCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGgc > 2:1446746/1‑107 (MQ=255) gCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGgc < 1:1446746/107‑1 (MQ=255) gCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTa > 2:1156101/1‑150 (MQ=255) aTAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATc < 1:62867/150‑1 (MQ=255) aTAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATc < 1:62827/150‑1 (MQ=255) tAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCcaggc > 2:616845/1‑111 (MQ=255) aaGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGCATCCTCATTGAGCGGTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCAc > 1:1908593/1‑150 (MQ=255) gCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACtt > 1:69073/1‑150 (MQ=255) cAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTc < 2:69073/150‑1 (MQ=255) ccGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGa > 1:846243/1‑150 (MQ=255) ccGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGa > 2:2855745/1‑150 (MQ=255) ccGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGa < 2:1185263/150‑1 (MQ=255) cGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCcaggcagg > 2:959726/1‑103 (MQ=255) cGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCcaggcagg < 1:959726/103‑1 (MQ=255) aGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGcc < 2:1907862/150‑1 (MQ=255) cAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTg < 2:1732061/150‑1 (MQ=255) aGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGc > 2:2274767/1‑150 (MQ=255) gggTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCt < 2:2778156/150‑1 (MQ=255) gTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGt < 2:1759317/150‑1 (MQ=255) gCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCg > 2:1466375/1‑150 (MQ=255) aGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCggg < 1:2961714/150‑1 (MQ=255) aaCCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTg > 2:5026/1‑150 (MQ=255) cAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACa > 2:3038272/1‑150 (MQ=255) aaCAGCATGCGAATCGCGCGCATGGGCATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCCCCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCCAGCCCTTGGTGTTTATCGGCGTGACaa > 2:150048/1‑150 (MQ=255) aaCAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGtt < 2:2606327/83‑1 (MQ=255) aaCAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGtt > 1:2606327/1‑83 (MQ=255) aaCAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCAACGGTGGCGCcag > 1:493219/1‑73 (MQ=38) aTGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCgggg > 1:11093/1‑138 (MQ=255) tGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGTGCCAACGTTGGCGCCAGGCAGGGTTTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGc > 1:1597584/1‑150 (MQ=255) gCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGgccgcc > 1:1262776/1‑95 (MQ=255) gAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTc > 1:96744/1‑81 (MQ=255) gAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCAc < 2:2238967/105‑1 (MQ=255) gAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCAc > 1:2238967/1‑105 (MQ=255) gAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCAt < 1:5026/150‑1 (MQ=255) aTGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGACt > 1:2027400/1‑150 (MQ=255) aTGGGAATCCTCAGTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCG‑CACTCA‑TGCGTTCTTGCTGACGTTTCCTGCCGCCCGGCTGCATCCCATCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGACt < 1:1466375/150‑1 (MQ=255) tGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCACGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGACTc > 1:280819/1‑150 (MQ=255) aaTCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGACTCGATc > 2:1028274/1‑150 (MQ=255) aTCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCgggg < 1:2072661/117‑1 (MQ=255) tCCTCGTTGAGCTTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCTGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGACTCGATCAt < 1:150048/150‑1 (MQ=255) ccTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGACTCGATCATg > 2:800164/1‑150 (MQ=255) tCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCggg < 2:1535373/67‑1 (MQ=255) tCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCggg > 1:1535373/1‑67 (MQ=255) tCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGACTCGATCATgcg > 2:92406/1‑150 (MQ=255) aTTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGACTCGATCATgcgcg > 2:2454711/1‑150 (MQ=255) gAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCGGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGACTCGATCATGCGCGCGGCACGGtt < 2:2579419/150‑1 (MQ=255) aaaaGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGACTCGATCATGCGCGCGGCACGGTTg > 2:2178779/1‑150 (MQ=255) aaaaGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTGCCCGCGAGACGTGGCTGTTCATCGGGGTGAAAACGCCGGGCGTCTCCATCGACTCGATCATGCGCGCGGCACGGTTg < 1:2769797/150‑1 (MQ=255) ggCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGCCTCGATCATGCGCGCGGCACGGTTGTAGc < 2:1141881/150‑1 (MQ=255) gCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTGTCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGACTCGATCATGCGCGCGGCACGGTTGTAGcc < 2:2028372/150‑1 (MQ=255) tGGCGCCAACGGTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCg < 2:1970608/103‑1 (MQ=255) tGGCGCCAACGGTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCg > 1:1970608/1‑103 (MQ=255) ggCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGACTCGATCATGCGCGCGGCACGGTTGTAGCCGATc < 2:1861991/150‑1 (MQ=255) gcgcCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGtt > 2:2341016/1‑82 (MQ=255) gcgcCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGtt < 1:2341016/82‑1 (MQ=255) gcCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCAt < 2:341060/110‑1 (MQ=255) gcCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCAt > 1:341060/1‑110 (MQ=255) ccACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGACTCGATCATGCGCGCGGCACGGTTGTAGCCGATCTTCa < 2:2027400/150‑1 (MQ=255) cACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGACTCGATCATGCGCGCGGCACGGTTGTAGCCGATCTTCAg > 1:2498048/1‑150 (MQ=255) aCCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGcc > 2:2460744/1‑95 (MQ=255) aCCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGcc < 1:2460744/95‑1 (MQ=255) | TCTGCGACTTTTCCAGCAACTGGGTCAGGCGTTGTACGTCTTGCTCACCGGCATAAGCAGTAACCGAGCCCAGGGTCAGGGCAGAAACCAACAGCATGCGAATCGCGCGCATGGGAATCCTCATTGAGCGTTGAAAAGGCCTGGCGCCACCGTTGGCGCCAGGCAGGGTGTTCAT‑CAGTCG‑CGCGGGCCGCCCGGGGCTATCACTTCCCGCGAGCCGTTGCTGTTCATCGGGGTGACAACGCCGGCCATCTCCATCGACTCGATCATGCGCGCGGCACGGTTGTAGCCGATCTTCAG > NC_002947/4512357‑4512653 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |