| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,520,498 | A→T | 6.8% | intergenic (+45/+27) | cspD → / ← icd | DNA replication inhibitor/NADP(+)‑specific isocitrate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,520,498 | 0 | A | T | 6.8% | 360.2 / 14.7 | 117 | intergenic (+45/+27) | cspD/icd | DNA replication inhibitor/NADP(+)‑specific isocitrate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (58/51); new base T (4/4); total (62/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.23e-01 | |||||||||||
Only 100 of 123 total aligned reads displayed.
CCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGAT > NC_002947/4520352‑4520647 | cccAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGGCTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTaaaa > 1:1034114/1‑150 (MQ=255) ccAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAaag > 2:2667137/1‑150 (MQ=255) ccAAGGGCTTGCACGCCGTTGAAATCAAAGATGACGAGGCGGATGCGGATGAGGTGGTCAGAGCCTTGGTCGTGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAaag > 1:1597033/1‑150 (MQ=255) cAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAaaga > 1:525872/1‑150 (MQ=255) cAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAaaga > 2:1112119/1‑150 (MQ=255) aaGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAaagaa < 2:1235525/150‑1 (MQ=255) aaGGCCTTGCACGCCACTGAAATCAAAGATGCCGCGGCCGACGCGGCAGAGGCTGCAAGAGCCTTGGGCGAGCCGCAAAGAGAAACTGCAAAAGCCTGACTGCCTGCGCAGTACCCATAGACAAAAAAATCGGCCGCTTCTTTAAaagaa < 2:1937358/150‑1 (MQ=255) gCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCTAAACTGCAAAAGCCTGACGGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGa < 2:418648/150‑1 (MQ=255) cTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGTCGCTTCTTTTAAAGAAGCggc < 1:473601/150‑3 (MQ=255) gCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAATCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCgg > 1:215397/1‑150 (MQ=255) cACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGt > 1:2604801/1‑150 (MQ=255) aCGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGt‑t < 1:1622577/150‑1 (MQ=255) gTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAACCGGTCGCTTCTTTTAAAGAAGCGGCCGAt‑tttttt < 2:1855978/150‑4 (MQ=38) tGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGtt < 2:2701867/150‑1 (MQ=255) aaaTCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTAACGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGc < 2:1081423/150‑1 (MQ=255) aaTCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGcc < 1:1112119/150‑1 (MQ=255) aaTCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGcc < 2:525872/150‑1 (MQ=255) aaTCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGcc < 2:68579/150‑1 (MQ=255) tCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCTCGTCGTGAAAAGAAGCGACCGGT‑TTTCTGTTGccag > 2:1273354/1‑148 (MQ=255) tCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCt‑t > 2:1279730/1‑150 (MQ=255) tCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCt‑t > 1:1396317/1‑150 (MQ=255) aaaGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TAc > 2:1262931/1‑150 (MQ=255) aaaGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TAc > 1:1829133/1‑150 (MQ=255) gCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATgtgt < 1:1279730/150‑1 (MQ=255) gCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATgtgt < 2:1829133/150‑1 (MQ=255) ccGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGtt < 1:2978221/150‑1 (MQ=255) ccGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGtt > 1:2655596/1‑150 (MQ=255) cTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGtt > 2:623933/1‑127 (MQ=255) tGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTc > 2:1513318/1‑150 (MQ=255) cGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCAt < 2:447978/150‑1 (MQ=255) ggCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATc < 2:2864132/150‑1 (MQ=255) gCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCg > 2:2009486/1‑150 (MQ=255) gCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCg > 2:2994545/1‑150 (MQ=255) gatGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGt‑tt > 2:765732/3‑110 (MQ=255) gCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGt‑tt < 1:765732/110‑1 (MQ=255) tGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGcc < 2:3072225/150‑1 (MQ=255) ccAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTg < 2:2655596/150‑1 (MQ=255) cAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGtt < 1:2029960/125‑1 (MQ=255) agagCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGc < 1:630417/95‑1 (MQ=255) agagCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGc > 2:630417/1‑95 (MQ=255) cTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAgctgct > 2:1946806/1‑150 (MQ=255) ttGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTaa < 1:1158775/82‑1 (MQ=255) ttGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTaa > 2:1158775/1‑82 (MQ=255) gggCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTAc < 1:2608950/150‑1 (MQ=255) gggCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTAc < 1:2667137/150‑1 (MQ=255) cGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACAGGT‑TATC‑CTTGCCGCCGCATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAg > 2:2385129/1‑150 (MQ=255) gAGCCGCAAAGCGAAACTGTAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACCAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGc > 1:849647/1‑150 (MQ=255) gAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGc < 1:1946806/150‑1 (MQ=255) ccGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTg < 1:318779/150‑1 (MQ=255) cGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTgg > 2:2139773/1‑150 (MQ=255) aGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGccc < 2:215397/150‑1 (MQ=255) aaCTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGAGCGGT‑TTTCTGTTGCCT‑TACATGTGTTGGATCATTTCATCGCCAACGCCTGAGCTGCTTGCCAGCTTGGCGCCCTCCAt > 1:2461105/1‑150 (MQ=255) cTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCa > 1:2164963/1‑150 (MQ=255) tGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGTCGCTTCTTTTAAAGAAGCggc < 2:1843185/69‑3 (MQ=37) tGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGTCGCTTCTTTTAAAGAAGCggc > 1:1843185/1‑67 (MQ=37) aaaaGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCg > 1:1769205/1‑150 (MQ=255) aGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTc > 2:853424/1‑150 (MQ=255) ccTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACTGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGa > 1:2297709/1‑150 (MQ=255) ccTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAg > 2:1801346/1‑113 (MQ=255) ccTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAg < 1:1801346/113‑1 (MQ=255) cTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCaa < 2:2285525/141‑1 (MQ=255) cTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGACT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGaa > 1:1827190/1‑150 (MQ=255) ctgcctgcGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCg > 2:1281465/1‑150 (MQ=255) gcctgcGCTGTGGCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGCTCGTTATTACAAATTCC‑‑TACATGTTTTTGATCATTTTATCGCCAAAGCCTGAGCTGCTTACCATCTTGGCGCCCTCCATCAATCGCTCGAAATCGTa < 1:2994545/150‑1 (MQ=255) ctgcGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAgg > 1:1884852/1‑150 (MQ=255) tgcGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCTT‑TAGATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATAACTAGCTCGAAATCGTAGGt > 2:853742/1‑150 (MQ=255) gcgcTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTc < 1:1262931/150‑1 (MQ=255) gcTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCt < 1:1601823/97‑1 (MQ=255) gcTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCt > 2:1601823/1‑97 (MQ=255) tgtgCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAg > 2:2154556/1‑92 (MQ=255) tgtgCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAg < 1:2154556/92‑1 (MQ=255) tgtgCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACgg > 2:3044549/1‑150 (MQ=255) tgtgCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACgg < 1:2139773/150‑1 (MQ=255) tgtgCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACgg > 2:391597/1‑150 (MQ=255) tgCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTc < 2:2164963/150‑1 (MQ=255) tgCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTc < 2:320781/150‑1 (MQ=255) ccGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCtt < 1:222797/150‑1 (MQ=255) cGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGGAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTg > 2:185703/1‑150 (MQ=255) cGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAg < 1:186500/87‑1 (MQ=255) cGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTg < 2:1597033/150‑1 (MQ=255) cGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTg < 1:739870/150‑1 (MQ=255) cGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTg < 1:305199/150‑1 (MQ=255) aCAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAgc > 1:464299/1‑88 (MQ=255) aaaaaaaTCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGTCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAAt > 1:2494124/1‑150 (MQ=255) aaaaaTCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTg < 2:2395605/140‑1 (MQ=255) aaaaaTCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTg > 1:2395605/1‑140 (MQ=255) accGGTCGCTTCTTTTAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCaa > 1:1241223/3‑143 (MQ=255) gtcGCTTCTTTTAAAGAAGCGGCCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTg > 2:1916710/3‑150 (MQ=255) gCCGCTTCTTTAAAAGAAGCGACTGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTg < 2:2297709/150‑1 (MQ=255) gCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTg < 2:2494124/150‑1 (MQ=255) ccGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTgg > 1:1536182/1‑150 (MQ=255) cGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCAt > 2:1587352/1‑146 (MQ=255) cGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCAt < 1:1587352/146‑1 (MQ=255) gCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTg < 1:1281465/150‑1 (MQ=255) gCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTg > 1:2903133/1‑150 (MQ=255) cttcttTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGc < 2:1034114/150‑1 (MQ=255) cttTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGAt < 1:3042846/46‑1 (MQ=255) cttTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGAt > 2:3042846/1‑46 (MQ=255) tttAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCtt < 2:2903133/150‑1 (MQ=255) gaaaaGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTtga < 2:868372/149‑1 (MQ=255) | CCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGT‑TTTCTGTTGCCT‑TACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGAT > NC_002947/4520352‑4520647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |