| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,522,285 | C→G | 5.3% | F30L (TTC→TTG) ‡ | idh → | isocitrate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,522,285 | 0 | C | G | 5.3% | 402.7 / 8.5 | 126 | F30L (TTC→TTG) ‡ | idh | isocitrate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (63/56); new base G (2/5); total (65/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 126 total aligned reads displayed.
CGCCTACCCTGCGCACCACGAGACTCGAGCACGCTCAGCACACAGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGCGGAACTGGGCCAGCTGGCTACCACCCCTGAAGC > NC_002947/4522138‑4522431 | cgcCTACCCTGCGCACCACGAGACTCGAGCACGCTCAGCACACAGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCAc < 2:225661/150‑1 (MQ=255) tGCGCACCACGAGACTCGAGCACGCTCAGCACACAGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCAGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGGTGAACGCTTCgat < 2:2278021/150‑3 (MQ=255) gcgcACCACGAGACTCGAGCACGCTCAGCACACAGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCt < 1:2799648/150‑1 (MQ=255) gcACCACGAGACTCGAGCACGCTCAGCACACAGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGa > 1:2576935/1‑150 (MQ=255) caccacGAGACTCGAGCACGCTCAGCACACAGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTTGCCGCTTACTCGCTGGTGGCGATCATCGAAGCGGTGAACGCTTCgatgatc < 1:60270/150‑7 (MQ=255) accacGAGACTCGAGCACGCTCAGCACACAGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACa > 2:2362734/1‑150 (MQ=255) gagaCTCGAGCACGCTCAGCACACAGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCt > 1:1016542/1‑150 (MQ=255) cGCTCAGCACACAGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTcgc < 1:1279429/150‑1 (MQ=255) gCTCAGCACACAGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTcg < 1:1014205/148‑1 (MQ=255) cTCAGCACACAGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGa < 2:1686539/150‑1 (MQ=255) tCAGCACACAGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGAc > 2:1576957/1‑150 (MQ=255) aGCACACAGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACAt > 2:837076/1‑150 (MQ=255) gCACACAGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACAtt > 2:989255/1‑150 (MQ=255) gCACACAGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACAtt < 2:2317269/150‑1 (MQ=255) acacaGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAACCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCACTTCGGCTGACATCGCTGTCGAAACTCGCGCCATTTc > 2:1179360/1‑150 (MQ=255) acaGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCtt < 1:773179/114‑1 (MQ=255) acaGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGGTGAACGCTTCgatgatc > 2:2015641/1‑116 (MQ=255) agagTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACAGCGCTTTCGAAACTCGCGACATTTCCctggg > 1:646358/1‑149 (MQ=255) gTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGGTGAACGCTTCga > 1:1091386/1‑109 (MQ=255) gTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGGTGAACGCTTCga < 2:1091386/110‑2 (MQ=255) ttAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCctggctg < 2:2506203/148‑1 (MQ=255) ttAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCctggctg > 1:2506203/1‑148 (MQ=255) ttAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCtggctggc < 1:1576957/150‑1 (MQ=255) ttAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCtggctggc > 1:2601017/1‑150 (MQ=255) tAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGcc < 1:2270347/150‑1 (MQ=255) cccGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTa > 1:2379281/1‑150 (MQ=255) cccGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTa > 1:891921/1‑150 (MQ=255) ccGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTAt > 2:1298113/1‑150 (MQ=255) ccGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTAt > 1:767735/1‑150 (MQ=255) gCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTc < 2:65692/123‑1 (MQ=255) gCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATcc < 2:767735/150‑1 (MQ=255) aTGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCtt < 1:1052217/150‑1 (MQ=255) gCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTgc < 2:322230/150‑1 (MQ=255) ccACCCGTTCCAAGATCATCTATACCTTCACCAACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCt > 2:551448/1‑107 (MQ=255) ccACCCGTTCCAAGATCATCTATACCTTCACCAACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCt < 1:551448/107‑1 (MQ=255) aCCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATc > 1:1221433/1‑141 (MQ=255) ccGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCct < 1:2161480/126‑1 (MQ=255) ccGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCct > 2:2161480/1‑126 (MQ=255) ccGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCtt < 2:1248115/150‑1 (MQ=255) cAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGa < 2:749691/150‑1 (MQ=255) cAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGa < 2:1858272/150‑1 (MQ=255) aaGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGTGTTCACCGCTTCGGCTGACATCGCTGTCGaaa > 1:795093/1‑103 (MQ=255) aaGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCAc < 1:2331769/77‑1 (MQ=255) aaGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCAc > 2:2331769/1‑77 (MQ=255) aaGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGaaa < 2:795093/103‑1 (MQ=255) aaGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAg > 1:150581/1‑150 (MQ=255) tcatcTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAAc > 2:1564607/1‑150 (MQ=255) cactcTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAAc > 2:3056871/4‑150 (MQ=255) atcTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCtggctggc < 1:1118018/120‑1 (MQ=255) atcTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCtggctggc > 2:1118018/1‑120 (MQ=255) atcTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTg > 1:254648/1‑150 (MQ=255) tcTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTgcc < 2:1081409/131‑1 (MQ=255) cTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGAc < 1:2735620/82‑1 (MQ=255) aCCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCa < 1:1980466/150‑1 (MQ=255) cTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCaga > 1:2823440/1‑150 (MQ=255) cTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTACTGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCaga > 2:1271875/1‑150 (MQ=255) ttCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCagag > 2:1536962/1‑150 (MQ=255) cACCGACGAAGCCCCAGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGaa < 1:989255/150‑1 (MQ=255) aCCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGaa < 2:1553853/149‑1 (MQ=255) aCCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGaa > 1:1553853/1‑149 (MQ=255) ccGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGc > 2:2429315/1‑150 (MQ=255) gacgaAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTgccg < 1:210278/118‑1 (MQ=255) gacgaAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTgccg > 2:210278/1‑118 (MQ=255) gacgaAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCaa < 1:1298113/150‑1 (MQ=255) aaGCCCCCGCCCTCGCCACTTACTCGCTGCTACTGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAg < 1:1271875/150‑1 (MQ=255) aaGCCCCAGACCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATTGCTGTCGACCATCGAGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAg < 1:995310/150‑1 (MQ=255) ccccGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGCCATTTCCCTGGCTGGCCGTATCCTTgccgc < 2:1633769/111‑1 (MQ=255) ccccGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTgccgc > 1:1633769/1‑111 (MQ=255) cccGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGa < 1:2587455/80‑1 (MQ=255) cccGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGa > 2:2587455/1‑80 (MQ=255) cccGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGAt > 2:1688871/1‑150 (MQ=255) ccTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCt < 1:1688871/150‑1 (MQ=255) tCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTgg < 1:709470/150‑1 (MQ=255) tCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTgg > 2:709470/1‑150 (MQ=255) cGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTgac < 1:3056871/150‑3 (MQ=255) cGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGc > 1:3032410/1‑150 (MQ=255) cACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAg > 2:46046/1‑134 (MQ=255) aCTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGCGGAACTgg < 2:2379281/150‑1 (MQ=255) cTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTg > 2:2941002/1‑109 (MQ=255) tCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTg < 2:1028580/108‑1 (MQ=255) tCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTg > 1:1028580/1‑108 (MQ=255) tCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTg < 2:2696584/138‑1 (MQ=255) tCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTg > 1:2696584/1‑138 (MQ=255) gctgctGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCtt < 2:37472/93‑1 (MQ=255) gctgctGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCtt > 1:37472/1‑93 (MQ=255) gctgcCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGCGGAACTGGGCCAGCt < 1:1087752/150‑1 (MQ=255) tgcCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGCGGAACTGGGCCAGCTgg < 2:254648/150‑1 (MQ=255) tgcCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGCGGAACTGGGCCAGCTgg < 2:1016542/150‑1 (MQ=255) catcGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGCGGAACTGGGCCAGCTGGCTaccac < 2:1211598/150‑1 (MQ=255) atcGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGCGGAACTGGGCCAGCTGGCTaccacc > 2:283418/1‑150 (MQ=255) atcGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGCGGAACTGGGCCAGCTGGCTaccacc > 1:1937113/1‑150 (MQ=255) tcGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGCGGAACTGGGCCAGCTGGCTACCAccc > 2:1430914/1‑150 (MQ=255) gAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGCGGAACTgg < 1:1086849/130‑1 (MQ=255) gAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGCGGAACTgg > 2:1086849/1‑130 (MQ=255) gAAGCGTTCACCGCTTCGGATGACATCGCTGTCGAAAGTTGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGCGGAACTGGGCCAGCTGGCTACCACCCCt > 1:1605279/1‑150 (MQ=255) aaGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGCGGAACTGGGc > 1:364491/1‑131 (MQ=255) aaGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGCGGAACTGGGCCa > 2:2659216/1‑133 (MQ=255) gTTCACCGCTTCGGCTGACATCGCTGTCGCAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGCGGAACTGGGCCAGCTGGCTACCACCCCTGAAGc > 1:2385192/1‑150 (MQ=255) ttCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCCTgc < 2:564514/65‑1 (MQ=255) ttCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCCTgc > 1:564514/1‑65 (MQ=255) | CGCCTACCCTGCGCACCACGAGACTCGAGCACGCTCAGCACACAGAGAGTTAACCCGCATGCCCACCCGTTCCAAGATCATCTATACCTTCACCGACGAAGCCCCCGCCCTCGCCACTTACTCGCTGCTGCCGATCATCGAAGCGTTCACCGCTTCGGCTGACATCGCTGTCGAAACTCGCGACATTTCCCTGGCTGGCCGTATCCTTGCCGCCTTCCCGGAGCAACTGGGCGCAGAGAAGCAAGTAGGCGATCACCTGGCGGAACTGGGCCAGCTGGCTACCACCCCTGAAGC > NC_002947/4522138‑4522431 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |