| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,635,282 | G→A | 8.1% | L174F (CTC→TTC) | uvrY ← | BarA/UvrY two‑componenent system response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,635,282 | 0 | G | A | 8.1% | 276.6 / 11.6 | 99 | L174F (CTC→TTC) | uvrY | BarA/UvrY two‑componenent system response regulator |
| Reads supporting (aligned to +/- strand): ref base G (48/43); new base A (4/4); total (52/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.06e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
TGGCATCAAAGACTTGGGACATGAGGTTTTACAGGCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGAACGGTTTCAGCGCCAACTGCTGGGCGATCTGCGG > NC_002947/4635135‑4635423 | tGGCATCAAAGACTTGGGACATGAGGTTGTACAGGCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGACGCTGGTGACCGAGAGGTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGCggg > 2:203046/1‑149 (MQ=255) gCATCAAAGACTTGGGACATGAGGTTTTACAGGCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGcac < 1:2618828/150‑1 (MQ=255) tCAAAGACTTGGGACATGAGGTTTTACAGGCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGagag < 2:1778313/143‑1 (MQ=255) tCAAAGACTTGGGACATGAGGTTTTACAGGCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGagag > 1:1778313/1‑143 (MQ=255) aaaGACGTGGGACATGAGGTTTTACAGGCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACACCtt > 1:1792555/1‑150 (MQ=255) aaGACTTGGGACATGAGGTTTTACAGGCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTg > 2:2176452/1‑150 (MQ=255) aGACTTGGGACATGAGGTTTTACAGGCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGt > 1:1425987/1‑150 (MQ=255) gACTTGGGAAATGAGGTTTTACAGACTTGCGTCAACCAGACCGTGGCGAACGGCCAGCAAGGTCAGTTCGTCCTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTc < 1:531923/150‑1 (MQ=255) aCTTGGGACATGAGGTTTTACAGGCTTGCGTCAACCATACAGTGGCCAGCTGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGttg < 2:80990/150‑3 (MQ=255) cTTGGGACATGAGGTTTTACAGGCACGGCGCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTTgg > 1:80990/1‑150 (MQ=255) ttGGGACATGAGGTTTTACAGGCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGga > 1:15666/1‑150 (MQ=255) ttGGGACATGAGGTTTTACAGGCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCggg > 2:2030045/1‑149 (MQ=255) ttGGGACATGAGGTTTTACAGGCTTGCGTCAACCATACCGTGGCGAACGGCAAGGAAGGTGAGTTCGAGGTCGATGGTGACCGAGAGCTTTTCAAAGTTGCGATAACGGTAAGGATTGACGGTCTTGGGCGAGAGGCAAAACTTGTCGga > 1:1456090/1‑150 (MQ=255) ttGGAACATGAGGTTTTACAGGCTTGCGTCAACCCTAATGCGACAAACGGCTAGCAAGGTCAGTTCGACGTCGCCCATGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGga < 1:1452983/150‑1 (MQ=255) aTGAGGTTTTACAGGCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATc < 1:2580071/150‑1 (MQ=255) tGAGGTTTTACAGGCTTGCGTCAACCATACCGTGGCGACCCGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAAGCACAACTTGTCGGAGATGATCt < 1:1696795/150‑1 (MQ=255) gAGGTTTTACAGGCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTg > 2:2168159/1‑150 (MQ=255) ggTTTTACAGGCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCa < 2:1548994/150‑1 (MQ=255) aCAGGCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCt > 1:2542219/1‑150 (MQ=255) ggCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGc < 1:2428852/150‑1 (MQ=255) gCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCa > 2:683319/1‑150 (MQ=255) gCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCa > 2:2984997/1‑150 (MQ=255) ttGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGc > 1:2951491/1‑150 (MQ=255) cGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCg < 1:2998188/122‑1 (MQ=255) cGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCg > 2:2998188/1‑122 (MQ=255) cGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATTATCTGCACTTTCTGGCCGc < 2:1247590/147‑1 (MQ=255) cGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGc > 1:1247590/1‑147 (MQ=255) cGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCcga < 1:485783/150‑1 (MQ=255) cGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCcga < 1:2267013/150‑1 (MQ=255) gTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTc > 1:2507661/1‑120 (MQ=255) gTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTc < 2:2507661/120‑1 (MQ=255) tCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCcgacg > 1:2711510/1‑150 (MQ=255) tCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAAGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCcgacg > 2:2206135/1‑150 (MQ=255) aCCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGCCCGAGAGTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGatc < 1:2984997/150‑1 (MQ=255) aCCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAAc > 2:276733/1‑111 (MQ=255) aCCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAAc < 1:276733/111‑1 (MQ=255) aCCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGatc > 1:2962573/1‑150 (MQ=255) aTACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGCAAGAGCGTTTTTCAACGATCCGATAACGGTAAGTATTGACGGTCTTGGTCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGatcatc < 2:2648348/150‑1 (MQ=255) aTACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCa > 1:528277/1‑137 (MQ=255) aTACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCa < 2:528277/137‑1 (MQ=255) tACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGAtcatca < 1:1627032/150‑1 (MQ=255) cGTGGCGAACGGCAAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATACGTTCACCTTGGGTGTTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAggg < 1:2065557/150‑1 (MQ=255) gAACGGCCAGCACGGTCAGTTCGACGTCGCTTGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCt > 2:2654750/1‑150 (MQ=255) gAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAAGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCt > 2:116517/1‑150 (MQ=255) aaCGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAgg < 2:3024217/91‑1 (MQ=255) aaCGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAgg > 1:3024217/1‑91 (MQ=255) cAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAAGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTc < 1:116517/150‑1 (MQ=255) aGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTTTTTTTTTTTTTAACGGTAAGTATTGACGGTCTTGGGCGAGTGGCACAACTTGTCGGAGATGATCTCCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTcc > 2:604780/1‑150 (MQ=255) cAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCANAGATCCNATAACGGTAAGTATTGACGGTCTTGGGCGAGAAGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCg > 1:2449405/1‑150 (MQ=255) ttCGACGTCGCTTGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACaa < 1:2654750/150‑1 (MQ=255) ttCGACGTCGCTGGTGACCGAGAGATTTTTTTTTTTTTTTTAACGGTAAGTATTGACGGTCTTTGGCGAGTGGTACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGCCGCTCATCAGGTCAATCTGGATTTCCCGTTCGGTCaa > 2:373835/1‑150 (MQ=255) gACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAAGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAAcgc < 1:2206135/150‑1 (MQ=255) gACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAAcgc > 2:3041141/1‑150 (MQ=255) gACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCAAAACTTGACGCCGAGTATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAAcgc > 1:969140/1‑150 (MQ=255) gTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTc < 2:2542219/150‑1 (MQ=255) tGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGTTCTTGGGCGAGAGGCACAACTCGAAGGATATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATCTCCCGTTCGGACAACGCGTCGAACg < 1:203046/150‑1 (MQ=255) tGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTg < 1:1902276/121‑1 (MQ=255) tGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTg > 2:1902276/1‑121 (MQ=255) gTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGga < 2:2711510/150‑1 (MQ=255) aCCGAGAGTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTgg < 1:550199/90‑1 (MQ=255) aCCGAGAGTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTgg > 2:550199/1‑90 (MQ=255) cGAGAGTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGga > 1:1977079/1‑145 (MQ=255) cGAGAGTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGga < 2:1977079/145‑1 (MQ=255) gagaGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTc < 1:1066706/84‑1 (MQ=255) gagaGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTc > 2:1066706/1‑84 (MQ=255) gagaGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGtt < 2:1696967/124‑1 (MQ=255) gagaGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGtt > 1:1696967/1‑124 (MQ=255) gagaGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGAcccc > 1:1085359/1‑150 (MQ=255) gagaGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGAcccc > 2:2066986/1‑150 (MQ=255) agagTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCt > 2:1635505/1‑150 (MQ=255) gTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAggg < 2:698547/102‑1 (MQ=255) gTTTTTCAAAGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAggg > 1:698547/1‑102 (MQ=255) tttttCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTg > 2:2094502/1‑72 (MQ=255) tttttCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTg < 1:2094502/72‑1 (MQ=255) tttCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGcc < 2:1085359/150‑2 (MQ=255) tttCAAAGATCCGATAACGATAAGTATTGACGGTCTTGGCCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGGAATCTGGTTTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCt < 1:1473939/150‑1 (MQ=255) cAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGga > 2:566163/1‑134 (MQ=255) cAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGga < 1:566163/134‑1 (MQ=255) aaaGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGaa > 2:2290741/1‑150 (MQ=255) aaaGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGaa > 2:426877/1‑150 (MQ=255) aaGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGTCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGAAc > 2:2684598/1‑150 (MQ=255) aGATCCGATAACGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGAACg > 2:846704/1‑150 (MQ=255) gATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGAACGGTTTCa > 1:1006173/1‑150 (MQ=255) gATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGAAACGGCTTCGAACGGAGACCCCTGCGGCTGGAACGGTTTCa > 1:162484/1‑150 (MQ=255) tAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGAACGGTTTCAgc < 2:1390095/150‑1 (MQ=255) cGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGAACGGTTTCAGCGcc > 1:1623387/1‑150 (MQ=255) cGGTAAATATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGAACGGTTTCAGCGcc < 1:1635505/150‑1 (MQ=255) tATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGCCACCGCGTCGAACGGAGACCCCTGCGGCTGGAACGGTTTCAGCGCCAActgat > 1:968418/1‑148 (MQ=255) tATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGAACGGTTTCAGCGCCAActgct > 1:2978763/1‑150 (MQ=255) tATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGAACGGTTTCAGCGCCAActgct < 1:3041141/150‑1 (MQ=255) tATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCATTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGAACGGTTTCAGCGCCAActgct > 2:829980/1‑150 (MQ=255) aTTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGAACGGttt > 2:3018418/1‑135 (MQ=255) aTTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGAACGGttt < 1:3018418/135‑1 (MQ=255) aTTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGAACGGTTTCAGCGCCAActgctg < 2:1006173/150‑1 (MQ=255) ggTCTTGGGCGAGAAGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGAACGGTTTCAGCGCCAACTGCTGGGCGAt > 2:1868321/1‑150 (MQ=255) ttGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTcc > 1:1382108/1‑78 (MQ=255) ttGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTcc < 2:1382108/78‑1 (MQ=255) gggCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGAc < 2:2117334/103‑1 (MQ=255) gggCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGAc > 1:2117334/1‑103 (MQ=255) gggCGAGAAGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGAACGGTTTCAGCGCCAACTGCTGGGCGATCTGCgg < 2:2449405/150‑1 (MQ=255) | TGGCATCAAAGACTTGGGACATGAGGTTTTACAGGCTTGCGTCAACCATACCGTGGCGAACGGCCAGCAAGGTCAGTTCGACGTCGCTGGTGACCGAGAGTTTTTCAAAGATCCGATAACGGTAAGTATTGACGGTCTTGGGCGAGAGGCACAACTTGTCGGAGATGATCTGCACTTTCTGGCAGCCGACGATCATCAGGGCAATCTGGATTTCCCGTTCGGACAACGCGTCGAACGGAGACCCCTGCGGCTGGAACGGTTTCAGCGCCAACTGCTGGGCGATCTGCGG > NC_002947/4635135‑4635423 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |