| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 35,012 | C→T | 9.7% | intergenic (+30/+28) | czrSA → / ← PP_0031 | metal‑sensor histidine kinase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 35,012 | 0 | C | T | 9.7% | 387.9 / 25.4 | 144 | intergenic (+30/+28) | czrSA/PP_0031 | metal‑sensor histidine kinase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (65/64); new base T (7/7); total (72/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.11e-01 | |||||||||||
Only 100 of 146 total aligned reads displayed.
TCGATCATGAGTCTGCACCAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGAAGTACTGAGCATTCACTTTCTCTT > NC_002947/34863‑35161 | tCGATCATGAGTCTGCACCAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATc < 2:2320618/150‑1 (MQ=255) aTCATGAGTCTGCACCAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGAc < 1:1137721/150‑1 (MQ=255) aTCATGAGACTGCACCAGGGATCGGCGAGCGTGGAGGTAACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGCAAGCCCAGCAAATTCAGCCGGCAATGACCGCCGCTTAACTTGCGCAGACACGATTAGGCCCGTCAATCGAc < 1:1461071/150‑1 (MQ=255) cATGAGTCTGCACCAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACgg < 2:449810/150‑1 (MQ=255) tGAGTCTGCACCAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCGATTGACGGGc < 1:800316/150‑1 (MQ=255) tGAGTCTGCACCAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCGATTGACGGGc < 1:1503541/150‑1 (MQ=255) gAGTCTGCACCAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGcc < 1:1557039/150‑1 (MQ=255) tCTGCACCAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGAc < 2:1802696/142‑1 (MQ=255) tCTGCACCAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGAc > 1:1802696/1‑142 (MQ=255) tCTGCACCAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCttt > 2:1981616/1‑150 (MQ=255) tCTGCACCAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCttt > 2:1237955/1‑150 (MQ=255) gCACCAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCGATTGACGGGCCtaatc > 1:1550362/1‑145 (MQ=255) cACCAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTtttgtt < 2:67492/150‑1 (MQ=255) ccAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTtttgtt > 2:205366/1‑148 (MQ=255) ccAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTtttgtt < 1:205366/148‑1 (MQ=255) cAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGc > 1:543497/1‑150 (MQ=255) cAGGGATCGGCGAGCGTGGAGGCGACCGAAGAAAACTTCACCTGGTGCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGc < 1:2437697/150‑1 (MQ=255) aGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGcc > 2:2982527/1‑150 (MQ=255) cGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCAt < 2:365724/150‑1 (MQ=255) cGAGCGTGGAGGTGACAGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCACAATGCAt < 2:2238467/150‑1 (MQ=255) cGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGt < 1:248731/150‑1 (MQ=255) tGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGc < 1:1482742/150‑1 (MQ=255) tGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGc < 1:2791864/150‑1 (MQ=255) ggAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGcc > 1:1005175/1‑150 (MQ=255) aCCGAAGAAAACTTCACCTGGTTCCACGTGCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCGTCAGTGCCGAAGGAc > 1:1620709/1‑150 (MQ=255) aCCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCGCGTCAAGCGGCGGGCCTGTGTGGTGCCTCAATGCATCAGTGACGAAGGaa > 2:2806519/1‑149 (MQ=255) cGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACca > 2:1704582/1‑150 (MQ=255) cGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACca > 1:2671234/1‑150 (MQ=255) gaagaaAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGt < 1:1857129/137‑1 (MQ=255) gaagaaAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGt > 2:1857129/1‑137 (MQ=255) aaaCTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGc > 2:820868/1‑107 (MQ=255) cTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCa < 1:704147/150‑1 (MQ=255) aCCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATggg > 2:2839415/1‑150 (MQ=255) ccTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGc > 2:2165813/1‑150 (MQ=255) cTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCGATTGACGGGc < 1:2841587/98‑1 (MQ=255) cTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCGATTGACGGGc > 2:2841587/1‑98 (MQ=255) cTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGAc > 1:2812138/1‑94 (MQ=255) gTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGAcc > 2:2456271/1‑150 (MQ=255) ccACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCa > 2:1515761/1‑150 (MQ=255) aCCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATgg > 1:846552/1‑139 (MQ=255) cTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTtttgt > 2:924481/1‑95 (MQ=255) cTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTtttgt < 1:924481/95‑1 (MQ=255) cTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAAt > 2:2081772/1‑150 (MQ=255) aCTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCAt > 1:1938910/1‑105 (MQ=255) tttCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGa > 1:136084/1‑150 (MQ=255) tCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAg > 2:1849440/1‑120 (MQ=255) ggAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTtaa > 2:1404955/1‑150 (MQ=255) ccAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCAc > 1:2524235/1‑136 (MQ=255) aGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATgg > 1:1611794/1‑118 (MQ=255) aGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATgg < 2:1611794/118‑1 (MQ=255) aGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAAtcttc < 2:612043/150‑1 (MQ=255) gCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATgg < 1:1519581/117‑1 (MQ=255) gCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATgg > 2:1519581/1‑117 (MQ=255) gCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAAtcttct < 2:1005175/150‑1 (MQ=255) aaaTGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGt < 1:1237955/150‑1 (MQ=255) aaTGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGtt < 1:2608344/150‑1 (MQ=255) aTGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTc > 2:2355059/1‑150 (MQ=255) aTGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGAACGCAGAATCACCGACTTAATAATCTTCTGTTc < 2:543497/150‑1 (MQ=255) gCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCAGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGt > 2:1634924/1‑150 (MQ=255) aGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCGTCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCa < 2:1620709/150‑1 (MQ=255) aGCCGGAAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCa > 1:865728/1‑150 (MQ=255) gCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTACGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAg < 1:2806519/150‑1 (MQ=255) gCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGAtt < 2:1045221/150‑1 (MQ=255) aaTGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTgg > 2:2800391/1‑150 (MQ=255) tGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCg < 1:2165813/150‑1 (MQ=255) tGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCg > 1:855481/1‑150 (MQ=255) cgccgcTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGt < 1:2403525/72‑1 (MQ=255) cgccgcTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGt > 2:2403525/1‑72 (MQ=255) cgccgcTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGtttt < 2:843039/150‑1 (MQ=255) ccgcTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGGGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTc > 1:2516970/1‑150 (MQ=255) gcTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCca < 1:2355059/150‑1 (MQ=255) ttAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGATCAAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCcaca > 1:2336029/1‑150 (MQ=255) ttAAATGGCGCAGACACGATTAGGCACCACAATCGACGGGCCTTGTGGATGCCGCAATTCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCcaca > 1:385985/1‑150 (MQ=255) tAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAg < 2:855481/150‑1 (MQ=255) aaTTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGgt < 2:865728/150‑1 (MQ=255) cAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCACCAAGGCATCAGGGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGaa < 1:2982527/150‑1 (MQ=255) cAGACACGATTAGGCAAGTCACTAGAAGGGAATTTAGGTGAACTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGaa < 2:2336029/150‑1 (MQ=255) acacGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGCCTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGAAGTa < 2:2563579/150‑1 (MQ=255) acacGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAAtctt < 1:119037/108‑1 (MQ=255) acacGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAAtctt > 2:119037/1‑108 (MQ=255) acacGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGAAGTa > 1:2602720/1‑150 (MQ=255) acacGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGAAGTa > 1:72660/1‑150 (MQ=255) acacGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGAAGTa > 1:1308223/1‑150 (MQ=255) acacGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCGCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGCGCTACCGCAGAATCACCGACTTAATAACCTTATGTTCGTCAGCAACTTCTTTTTTCCACAGGTGTGAGAAGTa > 1:1451336/1‑150 (MQ=255) acGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAAtc < 2:780465/104‑1 (MQ=255) acGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAAtc > 1:780465/1‑104 (MQ=255) gATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAgg > 1:2198680/1‑116 (MQ=255) gATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGAAGTACTGa < 2:136084/150‑1 (MQ=255) aTTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCATTGCCGAAGGACCACAGGGTTCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGAAGTACTGAg < 1:1160506/150‑1 (MQ=255) aTTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGAAGTACTGAg < 2:2516970/150‑1 (MQ=255) ttAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGAAGTACTGAGc > 1:2044809/1‑150 (MQ=255) aaGGCCCGTCGATTGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATgg > 2:936145/2‑70 (MQ=38) aaGGCCCGTCGATTGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATgg < 1:936145/69‑1 (MQ=38) aaGGCCCGTCGATTGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCa < 1:290166/84‑1 (MQ=39) ggCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGAAGTACTGAGCAtt > 1:37263/1‑150 (MQ=255) ccGTCGATTGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGAAGTACTGAGCATTCAc > 2:2657522/1‑150 (MQ=255) aaTCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGAAGTACTGAGCATTCACTTtct > 2:2661891/1‑150 (MQ=255) aaTCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGAAGTACTGAGCATTCACTTtct > 1:597425/1‑150 (MQ=255) aTCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGaa < 1:1811702/129‑1 (MQ=255) cGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGAAGTACTGAGCATTCACTTTCTCtt < 2:2602720/150‑1 (MQ=255) | TCGATCATGAGTCTGCACCAGGGATCGGCGAGCGTGGAGGTGACCGAAGAAAACTTCACCTGGTTCCACCTTCACTTTCCGGAAGCCCAGCAAATGCAGCCGGCAATGACCGCCGCTTAAATTGCGCAGACACGATTAGGCCCGTCAATCGACGGGCCTTTTGTTTGCCTCAATGCATCAGTGCCGAAGGACCACAGGGTCCATGGGCGACCGCAGAATCACCGACTTAATAATCTTCTGTTCGTCAGGATTGGCGTTTTTCCACAGGTGTGAGAAGTACTGAGCATTCACTTTCTCTT > NC_002947/34863‑35161 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |