| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 343,612 | T→A | 5.1% | intergenic (‑165/‑75) | PP_5439 ← / → PP_5440 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 343,612 | 0 | T | A | 5.1% | 427.0 / 9.0 | 137 | intergenic (‑165/‑75) | PP_5439/PP_5440 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (66/62); new base A (3/4); total (70/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
TGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCGGTTTCGCC > NC_002947/343463‑343761 | tGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGt < 2:866323/150‑1 (MQ=255)tGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGt < 2:2359847/150‑1 (MQ=255)tGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGt < 1:2429575/150‑1 (MQ=255) aGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtg < 1:753129/150‑1 (MQ=255) gTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtgg < 2:1894109/150‑1 (MQ=255) gTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtgg < 2:1929253/150‑1 (MQ=255) gTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAG‑TGATCTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtgg < 1:219595/150‑1 (MQ=255) tCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtggc > 2:2171154/1‑150 (MQ=255) tCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGCGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtggc < 1:2805432/150‑1 (MQ=255) tGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtggctg > 1:1376019/1‑150 (MQ=255) aaaGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtggctggc > 1:1087534/1‑150 (MQ=255) tGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCGGCTGCCAGCCAACATGGCTGGCAGca < 1:553244/150‑2 (MQ=255) gcgcGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCt < 2:360753/150‑1 (MQ=255) gcgTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGt > 1:2240106/1‑135 (MQ=255) gcgTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtg < 2:1431699/137‑1 (MQ=255) gTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCa < 2:1376019/150‑1 (MQ=255) tATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCAc < 1:2702920/150‑1 (MQ=255) tGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCGGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGc < 2:1606647/150‑1 (MQ=255) gCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCg < 1:1430915/150‑1 (MQ=255) cccGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGt > 2:826289/1‑150 (MQ=255) ccGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGc > 2:930630/1‑147 (MQ=255) ccGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGc < 1:930630/147‑1 (MQ=255) ccGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTc > 2:2993350/1‑150 (MQ=255) cGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTcc > 1:2148420/1‑150 (MQ=255) aaaCCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCGGCTGCCAGCCATGCTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtga < 1:1131575/150‑1 (MQ=255) cccAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTTGCTGGCAGCCTGTCCCTGTGCCAATTCGGCGTCCgtgagtt > 1:1385753/1‑149 (MQ=255) cccAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTcc < 1:449284/143‑1 (MQ=255) cccAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTcc > 2:449284/1‑143 (MQ=255) ccAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCGGCTGCCAGCCAACATGGCTGGCAGca < 2:1107035/118‑2 (MQ=255) ccAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCGGCTGCCAGCCAACATGGCTGGCAGca > 1:1107035/1‑117 (MQ=255) ccAAGCGGCGCGCCCGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgagtga > 2:472560/1‑150 (MQ=255) cAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGAt > 1:2723872/1‑150 (MQ=255) gcgcgcCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTGTTGCCGTCTGCGAGCCAGGTTGTCTTGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCAc > 1:1594015/1‑150 (MQ=255) cTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCg > 1:1852577/1‑123 (MQ=255) cTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTgc < 2:2767579/150‑1 (MQ=255) cTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTgc > 1:2500122/1‑150 (MQ=255) cTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGttt > 2:2705945/1‑141 (MQ=255) tGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGttt > 1:2916482/1‑140 (MQ=255) aGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAagga < 2:2148420/150‑1 (MQ=255) gCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAaggag > 2:1839781/1‑150 (MQ=255) gCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCATGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAaggag > 1:629098/1‑150 (MQ=255) ttGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgagtga < 1:1801998/123‑1 (MQ=255) ttGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgagtga > 2:1801998/1‑123 (MQ=255) ttGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAggagga > 2:2873937/1‑150 (MQ=255) ttGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAggagga > 1:2566576/1‑150 (MQ=255) ttGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAggagga > 1:2712576/1‑150 (MQ=255) tGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGgaggag < 2:1758790/150‑1 (MQ=255) tGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACCTTTGCGCTACAAAGgaggag < 1:1611481/150‑1 (MQ=255) tGAGATGTATGTTTGATACATATCCAGATTAT‑TCGTACCGTGGGCCCTGCGTAATTTCTGTCTTGCCCTCTGCGTTGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGgaggag < 1:996441/150‑1 (MQ=255) agaTGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTc < 2:2500122/150‑1 (MQ=255) agaTGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTc < 1:425778/150‑1 (MQ=255) aTGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGcc > 1:2829970/1‑86 (MQ=255) aTGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGcc < 2:2829970/86‑1 (MQ=255) gTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtggct > 1:1463226/1‑77 (MQ=255) gTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtggct < 2:1463226/77‑1 (MQ=255) tCTGTGGGATGCATATCCAGATTAT‑GCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGATGCCAGCCATGTTGGCGGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGGGATGAGCACGTTTGCGCTACAAAGGAGGAGTCATGaa < 2:553753/150‑1 (MQ=255) tCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGtt < 1:664374/72‑1 (MQ=255) tgtgGGCTACCCATCCAGACGAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGc > 2:2431937/1‑150 (MQ=255) tgtgGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAagga > 2:2107397/1‑137 (MQ=255) gtgATACATCTCCAGTTTAT‑TCGGACCGTCGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACt < 2:1385753/148‑1 (MQ=255) ggATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgagt > 1:122887/1‑107 (MQ=255) ggATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgagt < 2:122887/107‑1 (MQ=255) tatCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTg < 1:2808315/150‑1 (MQ=255) atCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTgg < 1:826289/150‑1 (MQ=255) tCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGt > 2:2448810/1‑150 (MQ=255) ccAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTc < 1:2141870/150‑1 (MQ=255) ccAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTc < 1:2431937/150‑1 (MQ=255) aGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgag > 1:682953/1‑94 (MQ=255) aGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgag < 2:682953/94‑1 (MQ=255) aGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtga < 2:2645863/93‑1 (MQ=255) aGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtga > 1:2645863/1‑93 (MQ=255) aGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCAc > 2:167105/1‑150 (MQ=255) cGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACg > 2:2263346/1‑150 (MQ=255) ccGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGGTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTa > 1:2924854/1‑150 (MQ=255) gTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTaca > 2:2302945/1‑150 (MQ=255) gCCCGGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGa < 2:70613/150‑1 (MQ=255) cTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGa < 1:2993350/150‑1 (MQ=255) tGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGAt > 1:17336/1‑150 (MQ=255) gTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTAt > 2:2900981/1‑117 (MQ=255) gTAGCTTCTCTCCTGCTGCCAGCCATGTTGCCTGGCCGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGAGCACGTTTGCGCTACAAAGAAGGAAGCATGAAGCACGTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGc > 2:345755/1‑150 (MQ=255) ttCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACg < 1:3007815/136‑1 (MQ=255) ttCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACg > 2:3007815/1‑136 (MQ=255) ttCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGt > 2:2524537/1‑150 (MQ=255) ttCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGt < 1:2302945/150‑1 (MQ=255) tctcCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTa < 1:1839781/150‑1 (MQ=255) tctcCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTa < 2:1087534/150‑1 (MQ=255) tcCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACt > 2:2219102/1‑150 (MQ=255) ctgctgCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTa < 2:2773474/146‑1 (MQ=255) ctgctgCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTa > 1:2773474/1‑146 (MQ=255) ctgctgCCAGCCATGTTGGCTGGCAGCCTGGCACTGCGCCAATTCGGCGTCCGTGAGTGATGAGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCCCCCTGTACGGCTACACGGACGATGGCAGGGTTGACTAt > 2:618705/1‑150 (MQ=255) ggctgcCAGCCAACATGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATc > 2:991340/2‑150 (MQ=255) gctgcCAGCCAACATGGCTGGCAGCCTGTCACTGCGCCAATTGGGGGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATcc > 1:2167501/1‑150 (MQ=255) tgcCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAggagga > 1:1977744/1‑83 (MQ=255) tgcCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCaa > 2:2096536/1‑150 (MQ=255) gccagccaACATGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAAc < 1:991340/150‑1 (MQ=255) tGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCGGTTTCg > 1:2459817/1‑150 (MQ=255) gTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCGGTTTCGc < 1:2219102/150‑1 (MQ=255) ttGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCaa > 2:2623805/1‑139 (MQ=255) ttGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCaa < 1:2623805/139‑1 (MQ=255) ttGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCGGTTTCGcc < 1:2873937/150‑1 (MQ=255) | TGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTAT‑TCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCGGTTTCGCC > NC_002947/343463‑343761 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |