| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,812,228 | C→T | 5.9% | intergenic (+103/‑290) | PP_4238 → / → PP_5665 | hypothetical protein/McbA family microcin B17‑like processing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,812,228 | 0 | C | T | 5.9% | 352.7 / 8.2 | 118 | intergenic (+103/‑290) | PP_4238/PP_5665 | hypothetical protein/McbA family microcin B17‑like processing protein |
| Reads supporting (aligned to +/- strand): ref base C (53/58); new base T (4/3); total (57/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.83e-01 | |||||||||||
Only 100 of 118 total aligned reads displayed.
GACACATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCATTATCA > NC_002947/4812081‑4812376 | gaCACATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCaa > 2:2623127/1‑150 (MQ=255) ccacaTTGGTGATTGGACGCAGGCCGTTCTTTAGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGCTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCaaa > 1:675497/2‑150 (MQ=255) acaTTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACa > 2:2003036/1‑150 (MQ=255) aTTGGTGATTGGACGCAGGTCGTTCTTTCGCAAGCAGTAAATCTCCCGATATCAATCTCACGACCAGGGAAATCTATCCCCCCGCAGGTCTTAC‑CCTGCACCTCGAAATTTCTACAAACTGTTCTTCGTTGCATGTTTAGGTCAAACATc < 2:31892/150‑1 (MQ=255) aTTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATc > 2:2430855/1‑150 (MQ=255) aTTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATc < 1:2393362/150‑1 (MQ=255) ggTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTAACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGc < 1:353328/150‑1 (MQ=255) tGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCTCTACGACCGCCAGGCAACTG‑GGGAAAGAACAACTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCAt > 1:1896478/1‑150 (MQ=255) ttGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCt > 1:2936221/1‑150 (MQ=255) gCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGcc > 1:1720241/1‑150 (MQ=255) tttCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTaaaa < 1:2430855/150‑1 (MQ=255) tttCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTaaaa < 2:518091/150‑1 (MQ=255) tttCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTaaaa > 1:2210481/1‑150 (MQ=255) cAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTca < 2:703715/150‑1 (MQ=255) cAAGCAGTAAATCTCCAGAAATCAATCTCACGACCCGGCAAATCTAGCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGTAGCATGCGGATCGCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTca > 2:673834/1‑150 (MQ=255) aaGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTcac > 1:960396/1‑150 (MQ=255) aGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCa > 2:2978663/1‑116 (MQ=255) aGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACcg > 1:2280382/1‑150 (MQ=255) gTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACcgc < 1:530724/150‑1 (MQ=255) gTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACcgc > 2:800099/1‑150 (MQ=255) aTCTCCCTAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCAt > 2:425663/1‑150 (MQ=255) tctcCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGc > 2:2187994/1‑112 (MQ=255) tctcCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGc < 1:2187994/112‑1 (MQ=255) cGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACaaa < 1:786562/150‑1 (MQ=255) cGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACaaa < 1:673834/150‑1 (MQ=255) cGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACaaa < 2:1842715/150‑1 (MQ=255) aaaTCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTaaaa < 1:2988982/127‑1 (MQ=255) aatcaatcTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGaa > 1:1478116/1‑150 (MQ=255) aatcaatcTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGaa < 1:2824014/150‑1 (MQ=255) aatcaatcCCATGTCCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGaa < 1:2434834/150‑1 (MQ=255) atcaatcTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAac < 2:1720241/150‑1 (MQ=255) tcaatcTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAaca > 1:2612646/1‑150 (MQ=255) tcaatcTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAaca < 2:1533394/150‑1 (MQ=255) caatcTCACGACCCGGCAAATCTATCCCCACTCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAacac < 2:1478116/150‑1 (MQ=255) aatcTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACt < 1:2731511/150‑1 (MQ=255) tctcACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTca > 2:2531563/1‑150 (MQ=255) tcACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTcaca > 1:1834180/1‑150 (MQ=255) cACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCacac < 2:2751372/150‑1 (MQ=255) aCGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCacacc > 2:1432973/1‑149 (MQ=255) ggCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTcacca > 1:3011779/1‑150 (MQ=255) cAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACcaca < 2:2936221/150‑1 (MQ=255) cAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACcaca < 2:1896478/150‑1 (MQ=255) cAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGAATAACAAAGAACACTCACACGCTCACcaca < 2:480625/150‑1 (MQ=255) aaaTCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATa < 2:24831/122‑1 (MQ=255) aaaTCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATa > 1:24831/1‑122 (MQ=255) aaaTCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACag > 1:435218/1‑150 (MQ=255) tCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACcgc > 2:1345744/1‑114 (MQ=255) tCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACcgc < 1:1345744/114‑1 (MQ=255) cTATCCCCACGCAGGTCTAAC‑CATGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCt > 2:2152306/1‑150 (MQ=255) tATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCtt < 1:2531563/150‑1 (MQ=255) aTCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCtat < 2:1532017/150‑3 (MQ=255) tCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTc < 2:2582685/150‑1 (MQ=255) ccccACGCAGGTCTAAC‑CATGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCg < 1:2152306/150‑1 (MQ=255) cccACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGc > 1:1056990/1‑150 (MQ=255) cACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTca > 1:811747/1‑100 (MQ=255) cACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTca < 2:811747/100‑1 (MQ=255) cACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTcacca > 1:1065282/1‑136 (MQ=255) cACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTcacca < 2:1065282/136‑1 (MQ=255) cGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGc > 2:936667/1‑150 (MQ=255) cGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGc < 2:2321808/150‑1 (MQ=255) cAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACAGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCa < 1:487875/150‑1 (MQ=255) gTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACcgc > 1:652208/1‑99 (MQ=255) gTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACcgc < 2:652208/99‑1 (MQ=255) aaC‑CCTGCAACTCAAAAGATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGAACACCACATAGCTTGCTCACGCCAGAATCAg > 2:1568133/1‑150 (MQ=255) gCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGctt < 2:435218/150‑1 (MQ=255) gCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGctt < 2:2829122/150‑1 (MQ=255) aCTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGcttctt < 1:1832175/150‑1 (MQ=255) aCTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGcttctt < 1:425663/150‑1 (MQ=255) tCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAAAGCTTTCGCACGCCAGAATCAGAAGCTTCTTAc < 1:279619/150‑1 (MQ=255) aaaaTATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACaga < 1:75011/116‑1 (MQ=255) aaaaTATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACaga > 2:75011/1‑116 (MQ=255) aaTATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACt > 1:2725782/1‑97 (MQ=255) tatCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATc > 1:1819760/1‑131 (MQ=255) tatCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATc < 2:1819760/131‑1 (MQ=255) atCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAata < 2:1056990/150‑1 (MQ=255) tAGAAACCATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCCCACCGCGCATAACAAAGAACACTCACACGCTCACCTCAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaa < 1:2353205/150‑1 (MQ=255) aGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaag > 1:2612153/1‑150 (MQ=255) aaaCAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAg < 1:1762621/82‑1 (MQ=255) aaaCAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaagaa > 2:2441123/1‑150 (MQ=255) cAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACCCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCa < 2:2210481/150‑1 (MQ=255) aaTTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCAc < 1:2441123/150‑1 (MQ=255) aaTTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCAc > 2:405045/1‑150 (MQ=255) aTTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACt > 1:1218156/1‑150 (MQ=255) ggAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCttatt > 2:829323/1‑44 (MQ=255) ggAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCttatt < 1:829323/44‑1 (MQ=255) gAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAaca > 1:2891235/1‑73 (MQ=255) gAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAaca < 2:2891235/73‑1 (MQ=255) gAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaagaag > 1:2579201/1‑138 (MQ=255) gAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaagaag < 2:2579201/138‑1 (MQ=255) cATGCTGATGTTTGACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTaaa < 1:1937696/149‑1 (MQ=255) cATGCTGATGTTTGACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTaaa > 2:1937696/1‑149 (MQ=255) aTGCTGATGTTTGACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAacac < 1:1542425/70‑1 (MQ=37) aTGCTGATGTTTGACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAacac > 2:1542425/1‑70 (MQ=37) aTGCTGATGTTTGACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTaaaaa > 2:1648502/1‑150 (MQ=255) gCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATGGCAAGCACTGAAAACTAAAAAcc < 1:870632/150‑1 (MQ=255) gCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAAcc > 2:870632/1‑150 (MQ=255) gTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCATTATc > 1:197703/1‑150 (MQ=255) gTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCATTATc > 2:2861351/1‑150 (MQ=255) tCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTaaa > 2:560964/1‑139 (MQ=255) tCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTaaa < 1:560964/139‑1 (MQ=255) | GACACATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAAC‑CCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCATTATCA > NC_002947/4812081‑4812376 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |