| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,826,912 | G→C | 5.1% | R1441R (CGC→CGG) | pvdL ← | non‑ribosomal peptide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,826,912 | 0 | G | C | 5.1% | 433.5 / 11.8 | 136 | R1441R (CGC→CGG) | pvdL | non‑ribosomal peptide synthetase |
| Reads supporting (aligned to +/- strand): ref base G (55/74); new base C (4/3); total (59/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.63e-01 | |||||||||||
Only 100 of 142 total aligned reads displayed.
GGGTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTC > NC_002947/4826765‑4827061 | gggTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAgcgggcg > 1:572223/1‑150 (MQ=255) cGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGa < 1:1033305/150‑1 (MQ=255) cGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGa > 2:3035610/1‑150 (MQ=255) gAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGAt > 2:641982/1‑150 (MQ=255) aGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATgg < 1:2497116/150‑1 (MQ=255) cgcTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGc < 1:101802/150‑1 (MQ=255) cgcTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGc < 2:123082/150‑1 (MQ=255) cTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGa < 2:1245673/150‑1 (MQ=255) tCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACTGGCCAGGCCCGCGCCACCGAGGTACACTTCGCCCGCCACACCGTGGGCGCTCAGTTCCAGCTCATCCTCCAGCACTCCGCAACCCGCATTGCCCAGCTGGCGGCCGCTggcctcc > 2:566183/1‑145 (MQ=255) tCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAg > 2:407668/1‑150 (MQ=255) cGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCTCTACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAgc < 1:971434/150‑1 (MQ=255) cGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATggg < 2:1779101/145‑1 (MQ=255) cGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATggg > 1:1779101/1‑145 (MQ=255) gCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAgcgc > 1:2451839/1‑150 (MQ=255) tGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGc < 1:499029/150‑1 (MQ=255) tGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGc > 1:1592712/1‑150 (MQ=255) aGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCg > 2:394363/1‑150 (MQ=255) aGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCg > 2:1932297/1‑150 (MQ=255) ccGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTcc > 2:145264/1‑150 (MQ=255) gcggcCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCcaccac < 1:407668/150‑1 (MQ=255) gcggcCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCcaccac < 1:3035610/150‑1 (MQ=255) gcCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCACCAAACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTg > 1:560956/1‑150 (MQ=255) cccAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCCGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCATCGGCCGCCCGCTggg < 2:38661/125‑1 (MQ=255) cccAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCCGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCATCGGCCGCCCGCTggg > 1:38661/1‑125 (MQ=255) ccAAGTAACCACGGGACAGGCCAGCCCCACTAAGGTACAGCTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGAc > 2:2339243/1‑150 (MQ=255) cAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACa < 2:2374023/150‑1 (MQ=255) aaGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCcaccac > 2:670411/1‑143 (MQ=255) tAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGc < 1:1626956/150‑1 (MQ=255) aCCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCa > 2:1639400/1‑150 (MQ=255) cACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGc < 2:1001222/116‑1 (MQ=255) cACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGc > 1:1001222/1‑116 (MQ=255) cACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCa > 2:1218375/1‑148 (MQ=255) cACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCa < 1:1218375/148‑1 (MQ=255) aCGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTg < 2:2578834/150‑1 (MQ=255) aCGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGGCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGa > 1:994726/1‑139 (MQ=255) cGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCCGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTgg < 2:670483/150‑1 (MQ=255) cGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTgg < 1:2183768/150‑1 (MQ=255) cGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTgg < 2:461917/150‑1 (MQ=255) gggCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTc > 1:2555668/1‑127 (MQ=255) gggCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTc < 2:2555668/127‑1 (MQ=255) gggCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTggg > 2:2780149/1‑150 (MQ=255) ccAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGa < 1:145264/150‑1 (MQ=255) ccAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATCGCCCATCGGCCGCCCGCTGGGcaat > 1:2394461/1‑110 (MQ=255) ccAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATCGCCCATCGGCCGCCCGCTGGGcaat < 2:2394461/113‑4 (MQ=255) gCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGtt < 1:394363/150‑1 (MQ=255) cccGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTg > 2:695503/1‑150 (MQ=255) cccGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTg > 1:1236272/1‑150 (MQ=255) cgcgCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACATCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGAt < 2:1077791/150‑1 (MQ=255) gcCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGANCGCTCGNCGTCCACCACCTNACAGTGCCAGTGGGTGACGTTGATGGc < 1:2455276/150‑1 (MQ=255) ccACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGACAAGCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCg < 1:675504/150‑1 (MQ=255) cACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCgg < 1:1447148/150‑1 (MQ=255) aCCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATgg < 1:2210748/95‑1 (MQ=255) cGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGttt < 1:254012/150‑1 (MQ=255) cGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGttt > 1:2400681/1‑150 (MQ=255) gAGGTACCGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGTGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTc < 2:2588422/150‑1 (MQ=255) ggTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAg < 1:316327/150‑1 (MQ=255) gTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGttt < 1:1717447/146‑1 (MQ=255) gTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGttt > 2:1717447/1‑146 (MQ=255) gTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGtt > 2:2224958/1‑145 (MQ=255) cAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGt < 1:647847/131‑1 (MQ=255) gTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCTTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGc < 1:2344414/150‑1 (MQ=255) ttCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGcc < 1:66750/150‑1 (MQ=255) cccGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATAc < 2:2451839/150‑1 (MQ=255) cccGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATAc < 2:1580007/150‑1 (MQ=255) ccGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGc < 2:75133/110‑1 (MQ=255) cGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCg < 2:1550781/150‑1 (MQ=255) acacCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTtg > 1:1771202/1‑150 (MQ=255) cacCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTtgt < 2:1455102/150‑1 (MQ=255) acCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTtgtg > 1:2138339/1‑150 (MQ=255) cGGGGGCGCTCAGTTCCAGCTCATCGTCCGGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCa > 2:574876/1‑150 (MQ=255) gggggCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGttt < 2:840349/125‑1 (MQ=255) gggggCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGttt > 1:840349/1‑125 (MQ=255) gggggCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAg < 1:1960447/150‑1 (MQ=255) gggCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACGGTGCCAGTGGGTGACTGGGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGtt < 2:107430/150‑1 (MQ=255) gggCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGtt < 1:1767044/150‑1 (MQ=255) gggCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGtt < 2:1603858/150‑1 (MQ=255) gatctcTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGtt < 1:675577/145‑1 (MQ=255) ggCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTGGGGCCATACAGATTGTGCTGTTg < 2:2421966/150‑1 (MQ=255) cTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCCGTTGCAcc > 2:1416572/1‑150 (MQ=255) tCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGGTGGCGGACTCTGGCGGGCCATACCCGTTGTGGCGTTGcggct > 1:2044261/1‑146 (MQ=255) tCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCgg > 1:648645/1‑114 (MQ=255) tCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCgg < 2:648645/114‑1 (MQ=255) aGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGc < 1:768958/150‑1 (MQ=255) ttCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGGGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCgg < 2:1731012/150‑1 (MQ=255) tCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGgc < 1:1298336/150‑1 (MQ=255) ccAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGgca > 2:2370191/1‑150 (MQ=255) cAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGgcag > 2:1309091/1‑150 (MQ=255) cTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCAc < 1:2780149/150‑1 (MQ=255) tCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTgc < 1:2339243/150‑1 (MQ=255) cgcgGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGt < 1:2731300/150‑1 (MQ=255) gcgGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTc > 1:2933258/1‑150 (MQ=255) agcacaTTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGc > 1:1673036/1‑150 (MQ=255) tcgCCCATCGGCCGCCCGCTGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGTGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCa > 1:260940/3‑142 (MQ=255) tcgCCCATCGGCCGCCCGCTGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGTGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCa < 2:260940/140‑1 (MQ=255) gCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGa < 2:1673036/150‑1 (MQ=255) ccATCGGCCGCCCGCTGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACa > 2:1276975/1‑150 (MQ=255) cAGCGGGCGGCCGATAGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACaa > 2:813132/1‑150 (MQ=255) gcggcCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTc > 1:2444271/1‑150 (MQ=255) gcggcCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTc < 1:574876/150‑1 (MQ=255) gcggcCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTc < 2:2933258/150‑1 (MQ=255) | GGGTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGGCCCGCGCCACCGAGGTACAGTTCGCCCGGCACACCGGGGGCGCTCAGTTCCAGCTCATCGTCCAGCACGCGGCACAGCACATTGCCCAGCGGGCGGCCGATGGGCGAGCGCTCGCCGTCCACCACCTGACAGTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTC > NC_002947/4826765‑4827061 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |