| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,858,564 | A→C | 5.3% | intergenic (‑25/+200) | PP_mr50 ← / ← ligA | Bacteria_large_SRP ncRNA/DNA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,858,564 | 0 | A | C | 5.3% | 259.0 / 5.0 | 96 | intergenic (‑25/+200) | PP_mr50/ligA | Bacteria_large_SRP ncRNA/DNA ligase |
| Reads supporting (aligned to +/- strand): ref base A (47/43); new base C (2/3); total (49/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.69e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
GGTTTTCCGACCCCAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGC > NC_002947/4858415‑4858710 | ggTTTTCCGACCCCAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGa > 1:1101255/1‑150 (MQ=255) gTTTTCCGACCCCAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGag > 2:2527384/1‑150 (MQ=255) gTTTTCCGACCCCAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGag > 2:3000503/1‑150 (MQ=255) ttttCCGACCCCAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGagc > 2:629808/1‑150 (MQ=255) tCCGACCCCAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGagcagc < 2:1500296/150‑1 (MQ=255) gACCCCAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAg < 2:2978557/150‑1 (MQ=255) cccAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACTGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTgg > 2:2267776/1‑150 (MQ=255) ccAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGCTCAGCGAgacat < 1:1758541/150‑5 (MQ=255) cAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGgcg > 2:888365/1‑150 (MQ=255) cAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGgcg > 1:1218996/1‑150 (MQ=255) cAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGgcg > 2:623168/1‑150 (MQ=255) aGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGgcgc > 1:1837475/1‑150 (MQ=255) aTGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCAtt > 1:1482828/1‑150 (MQ=255) gAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTa < 2:1837475/150‑1 (MQ=255) aGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTAc < 1:1266367/150‑1 (MQ=255) gcggcCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCg > 1:961800/1‑150 (MQ=255) cccACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTGCCTTCCGGGCCTCACCAGGTTACCGGGTAATCAATGCGGGGGGACCGATGGGGAAACCACTACATGCCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCtt > 1:24660/1‑150 (MQ=255) tcacccGCCACGCCCCGGCACTCGATGTTCCCTGTATGGCTGCTCCCTTCCGTGCCTGACCAGGTTAACGGGTAATCTGTGCTGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCttt < 2:1319576/149‑1 (MQ=255) caccaGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTg < 2:215954/150‑1 (MQ=255) caccaGCCACACCCAGGCGCTAGATAGCCCCCCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAACGCGGGGTGACCGATGGATCGACTTCGACATCTCTCGCTGTGCAGCGAGTAGCCCCAGTTTACTGGTCttgg < 2:429203/150‑3 (MQ=255) accaGCCACACCCCGGCACTCGATGTTCNCGCTATGGNTGCTCCCTTNCGGGGCTGACCAGGTTAACGGGTAATCAATGCGGGGGGGCCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGAGGCGCCATTGTACCGGGCTTTga > 1:1319576/1‑149 (MQ=255) caGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAg > 1:2970646/1‑150 (MQ=255) ccACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAg < 1:2015875/150‑1 (MQ=255) cacaCCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGa < 2:1593607/150‑1 (MQ=255) cacaCCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGa < 2:371030/150‑1 (MQ=255) acacCCCGGCGCTGGATGTTCCCGCTATGGCTGCTCCCGTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGAt < 2:1693556/150‑1 (MQ=255) acacCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCGGAACAGGTTAACGGGTAATCAATGCACCCGGCACGCACGGCCCACCACGACATGTCTCTCTGAGCAGCGAGTGGCGCCATTGTACAGGCCTGTGGGGCAGag > 1:1464921/1‑149 (MQ=255) cacCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATa > 1:1144535/1‑150 (MQ=255) cccccGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATAc < 2:1587680/149‑1 (MQ=255) cccGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACaa > 1:1432136/1‑150 (MQ=255) ccGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAAc > 2:2721696/1‑150 (MQ=255) tCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCg > 2:2242502/1‑150 (MQ=255) cGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCgg < 1:629808/150‑1 (MQ=255) aTGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCa < 2:1218996/150‑1 (MQ=255) ccGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGaaaaa > 2:1669201/1‑150 (MQ=255) ccGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGaaaaa > 1:10068/1‑150 (MQ=255) ccGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGaaaaa < 1:2527384/150‑1 (MQ=255) cGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAg > 1:2115632/1‑150 (MQ=255) gCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAga > 1:1894721/1‑149 (MQ=255) aTGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGtcat < 1:623168/150‑1 (MQ=255) gctgctCCCTTCCGGGCCTGACCAGGTTAAAGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTcatcat > 1:2148655/1‑150 (MQ=255) tgctCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCCCCATGGTACCGGTCTTTGGAGCAGATACAACCACTGCGGAAGAAAACGTCATCGttt < 2:765375/150‑1 (MQ=255) tCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTcatcat < 2:384906/145‑1 (MQ=255) tCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTcatcat > 1:384906/1‑145 (MQ=255) tCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTtctc > 1:1318142/1‑150 (MQ=255) cccTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCCGCGAGTGGCGCCATTGTACCGTTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCa < 1:1152253/150‑1 (MQ=255) cccTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCa > 2:1170154/1‑150 (MQ=255) cTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAAt < 2:961800/150‑1 (MQ=255) gggCCTGCCCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACtt < 1:1669201/150‑1 (MQ=255) gggCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAAc < 1:1387369/113‑1 (MQ=255) gggCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAAc > 2:1387369/1‑113 (MQ=255) cTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCa > 1:1046306/1‑150 (MQ=255) cTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCa < 2:2180095/150‑1 (MQ=255) aCCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAggg < 2:1482828/150‑1 (MQ=255) aCCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAggg > 2:62726/1‑150 (MQ=255) ccAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGt > 2:2809113/1‑150 (MQ=255) tAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGAt < 2:493977/150‑1 (MQ=255) aaCGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATg > 2:1841785/1‑150 (MQ=255) aCGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATgg < 2:1318142/150‑1 (MQ=255) gggTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGcc > 1:2139991/1‑150 (MQ=255) gggTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTA‑CGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCt > 1:2515717/1‑150 (MQ=255) cggcaaTCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGcc > 1:107574/5‑150 (MQ=255) cAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACgg < 1:2267776/150‑1 (MQ=255) aTGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGc > 2:923145/1‑150 (MQ=255) aTGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGc < 2:1432136/150‑1 (MQ=255) aTGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGc < 1:2242502/150‑1 (MQ=255) ggggggACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATAc < 2:1151695/79‑1 (MQ=255) ggggggACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATAc > 1:1151695/1‑79 (MQ=255) gcccGATGGTGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATGGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCTTGGACGCGCCTCTTcccg > 2:1528403/3‑150 (MQ=255) gACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTcgcg < 2:10068/150‑1 (MQ=255) cccGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCgg < 1:2053141/149‑1 (MQ=255) aCCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCgg < 1:3000503/150‑1 (MQ=255) aCCGATGGGGCCACCACCACATGTCTCGCTGAGCCGCGAGTGGCGCCATTGTACCGGTCTTTGACGCACATCAAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCgg < 1:371755/150‑1 (MQ=255) tGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTaaa < 2:2115632/150‑1 (MQ=255) ggggCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAgg > 1:2305356/1‑113 (MQ=255) ggggCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAgg < 2:2305356/113‑1 (MQ=255) gCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCg > 2:2208284/1‑150 (MQ=255) ctaccacTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACGGCTCTATACAGCATCTACATCCACTGCGGCCGCTCTAGTCATCATTTGTCAACGTTTATTCAAGCTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGc < 1:1596102/148‑1 (MQ=255) caccacTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCgg > 1:97847/1‑73 (MQ=255) accacTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTc > 2:419885/1‑150 (MQ=255) ccacTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCtag > 2:1596102/1‑148 (MQ=255) tACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACggg > 2:65041/1‑122 (MQ=255) tACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACggg < 1:65041/122‑1 (MQ=255) tACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACg > 1:1278209/1‑150 (MQ=255) cATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAgg > 1:1893113/1‑100 (MQ=255) cATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAgg < 2:1893113/100‑1 (MQ=255) aTGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGc < 2:1852201/150‑1 (MQ=255) ccactcGCTGCTCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGc < 1:647324/116‑1 (MQ=255) ccactcGCTGCTCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGc > 2:647324/4‑119 (MQ=255) gTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTg < 1:1408115/111‑1 (MQ=255) gTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTg > 2:1408115/1‑111 (MQ=255) cactcGCTGCTCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTcgcg > 2:2587967/3‑127 (MQ=255) cactcGCTGCTCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTcgcg < 1:2587967/125‑1 (MQ=255) tctcGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGAc > 2:2316195/1‑150 (MQ=255) gCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACggg > 2:2531306/1‑142 (MQ=255) gCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACggg < 1:2531306/142‑1 (MQ=255) gCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACcgcg > 1:2359156/1‑150 (MQ=255) cTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACgg > 1:193558/1‑140 (MQ=255) cTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACgg < 2:193558/140‑1 (MQ=255) cTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCgcgc < 1:2208284/150‑1 (MQ=255) | GGTTTTCCGACCCCAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGC > NC_002947/4858415‑4858710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |