| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,013,335 | G→C | 5.1% | L36L (CTG→CTC) | PP_5678 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,013,335 | 0 | G | C | 5.1% | 406.7 / 10.0 | 127 | L36L (CTG→CTC) | PP_5678 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (60/60); new base C (3/4); total (63/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.70e-01 | |||||||||||
Only 100 of 127 total aligned reads displayed.
ACCCGAGCAGTGCAACAAGCCTCAGACTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGATGTTCTCTGAGGAAGCTGACTCCTTACTCT > NC_002947/5013187‑5013483 | aCCCGAGCAGTGCAACAAGCCTCAGACTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGa > 2:2125333/1‑150 (MQ=255)aCCCGAGCAGTGCAACAAGCCTCAGACTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGa > 1:615617/1‑150 (MQ=255)aCCCGAGCAGTGCAACAAGCCTCAGACTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGa > 1:1652023/1‑150 (MQ=255)aCCCGAGCAGTGCAACAAGCCTCAGACTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGa > 1:1333363/1‑150 (MQ=255) ccGAGCAGTGCAACAAGCCTCAGACTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAgc > 2:197059/1‑150 (MQ=255) gCAGTGCAACAAGCCTCAGACTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGAGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTGTGATGATGGTGTACGAC‑AGCACGCCGTGCTGAGCgcgg > 1:778778/1‑150 (MQ=255) cAGTGCAACAAGCCTCAGACTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCgcggc < 2:1228321/150‑1 (MQ=255) aacaaGCCTCTGACTGAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGaa > 2:2422895/1‑150 (MQ=255) aacaaGCCTCAGACTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGcgcg < 1:1832096/142‑1 (MQ=255) acaaGCCTCAGACTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGaaa < 1:266430/150‑1 (MQ=255) caaGCCTCAGACTTAGGGGAGAGCCAATGAGGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTgcattc < 1:1643159/150‑6 (MQ=255) aaGCCTCAGACTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATc > 2:36498/1‑150 (MQ=255) aaGCCTCAGACTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATc > 2:116231/1‑150 (MQ=255) aaGCCTCAGACTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATc < 1:2026431/150‑1 (MQ=255) aGCCTCAGACTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCa < 1:116231/150‑1 (MQ=255) aCTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCgca < 2:3031528/150‑1 (MQ=255) cTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCgcag < 1:197059/150‑1 (MQ=255) ttAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAAt < 2:746302/138‑1 (MQ=255) ttAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAAt > 1:746302/1‑138 (MQ=255) gggAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCaaaa > 2:1565617/1‑150 (MQ=255) agCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCg > 1:2189932/1‑150 (MQ=255) gCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGa > 1:2872513/1‑150 (MQ=255) ccAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑CGTAAGGCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGaa < 2:431203/150‑1 (MQ=255) ccAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAg > 1:642855/1‑113 (MQ=255) aaTGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGc > 2:814501/1‑150 (MQ=255) tgatgaTCAAAGAGTTGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCt < 2:2818381/150‑1 (MQ=255) atCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCt < 2:1566083/145‑1 (MQ=255) atCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCt > 1:1566083/1‑145 (MQ=255) atCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGaa > 2:1811590/1‑150 (MQ=255) cAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACt > 1:1684371/1‑150 (MQ=255) aaGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTcc > 2:381105/1‑150 (MQ=255) gTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGGCGTTCTGATGATGGCC‑CCCACAAGCACGCCGTGCTCGGTAATTCGTTGAAGTCGATCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCt < 1:2363321/150‑1 (MQ=255) cGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCttt < 2:829076/150‑1 (MQ=255) gACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGaa > 2:636059/1‑130 (MQ=255) aCCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGc < 2:1684371/150‑1 (MQ=255) aCCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGc < 2:876571/150‑1 (MQ=255) cccTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTgg < 1:921663/101‑1 (MQ=255) cccTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTgg > 2:921663/1‑101 (MQ=255) cccTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCg > 1:1037509/1‑150 (MQ=255) ccTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCga > 2:7084/1‑150 (MQ=255) ccTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCga > 1:1162710/1‑150 (MQ=255) cTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCgag > 1:248481/1‑150 (MQ=255) tCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCgaga > 1:662775/1‑150 (MQ=255) tCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCgaga < 1:2125333/150‑1 (MQ=255) gCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAgctgc < 2:1515843/150‑1 (MQ=255) gCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAgctgc < 1:814501/150‑1 (MQ=255) cGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGctt < 1:1113704/150‑1 (MQ=255) gTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGcttc < 1:508065/150‑1 (MQ=255) gCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCttt < 1:2059921/150‑1 (MQ=255) ggTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGc < 2:1333363/150‑1 (MQ=255) gCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCCCGc > 2:2635510/1‑150 (MQ=255) gCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGc > 2:2154638/1‑150 (MQ=255) gTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAgctgc < 2:2270119/135‑1 (MQ=255) tAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCttt < 1:2320455/150‑1 (MQ=255) tttGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGa < 2:77958/63‑1 (MQ=255) tttGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGa > 1:77958/1‑63 (MQ=255) tttGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCaa > 2:579601/1‑150 (MQ=255) gTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGc < 2:549244/150‑1 (MQ=255) ttGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCgaga > 1:413247/1‑116 (MQ=255) ttGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCgaga < 2:413247/116‑1 (MQ=255) gCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTg < 1:2635510/150‑1 (MQ=255) gtccATACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGaa < 2:778778/148‑1 (MQ=255) gCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAAc > 2:2966619/1‑150 (MQ=255) aCTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATc > 2:312062/1‑97 (MQ=255) aCTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATc < 1:312062/97‑1 (MQ=255) ttGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGc < 2:845371/117‑1 (MQ=255) tCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTa > 2:1173700/1‑81 (MQ=255) tCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCa > 1:2724235/1‑150 (MQ=255) tCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCa > 1:276368/1‑150 (MQ=255) cTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGc < 1:946490/140‑1 (MQ=255) cTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGc > 2:946490/1‑140 (MQ=255) ttCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGc < 2:1972437/55‑1 (MQ=255) ttCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGc > 1:1972437/1‑55 (MQ=255) ttCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAAtt > 2:1254106/1‑150 (MQ=255) tgatgaCGGCCATCCAC‑AGCACGCCGTGCTGGGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGAt > 2:1885607/1‑150 (MQ=255) tgatgaCGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGAt < 1:2966619/150‑1 (MQ=255) gatgaCGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGt < 1:988476/40‑1 (MQ=255) atgaCGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGc > 1:2839717/1‑89 (MQ=255) atgaCGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGc < 2:2839717/89‑1 (MQ=255) atgaCGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGc > 2:1506810/1‑89 (MQ=255) atgaCGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGc < 1:1506810/89‑1 (MQ=255) ggCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAGGCGTGAACGCTGGGCCCAATTGATGTTctct < 2:2872513/150‑1 (MQ=255) ggCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGATGTTctct > 1:463538/1‑150 (MQ=255) ggCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGATGTTctct < 2:2915978/150‑1 (MQ=255) ggCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGATGTTctct < 1:2154638/150‑1 (MQ=255) ggCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGATGTTctct > 2:1264678/1‑150 (MQ=255) cATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGATGTTCTCTGAg < 1:1565617/150‑1 (MQ=255) acagaccGCCGTGCTGAGCGCGGCGTGGCAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGATGTTCTCTGAGGAAGc < 1:1411449/144‑1 (MQ=255) gCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGATGTTCTCTGAGGAAGCTGa < 2:194783/150‑1 (MQ=255) cACGCCGCGCTCAGCACGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAAtt > 2:2516583/1‑128 (MQ=255) aCGCCGCGCTCAGCACGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCttt < 2:977456/86‑1 (MQ=255) aCGCCGCGCTCAGCACGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCttt > 1:977456/1‑86 (MQ=255) aCGCCGCGCTCAGCACGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGATGTTCTCTGAGGAAGCTGACt > 1:1444240/1‑150 (MQ=255) cGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGATGTTCTCTGAGGAAGCTGACTc < 1:1811590/150‑1 (MQ=255) cGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGATGTTCTCTGAGGAAGCTGACTCCtt < 2:1162710/150‑1 (MQ=255) gTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCCAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGATGTTCTCTGAGGAAGCTGACTCCTTa < 1:659776/150‑1 (MQ=255) tGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGATGTTCTCTGAGGAAGCTGACTCCTTa > 2:2266872/1‑149 (MQ=255) tGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGATGTTCTCTGAGGAAGCTGACTCCTTa < 1:2266872/149‑1 (MQ=255) tGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCaa > 2:1660297/1‑116 (MQ=255) tGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGATGTTCTCTGAGGAAGCTGACTCCTTActct < 2:2724235/150‑1 (MQ=255) | ACCCGAGCAGTGCAACAAGCCTCAGACTTAGGGGAGAGCCAATGATGATCAAAGAGTCGACCCTCGCAGCCGTTGCGGTCAGCGTAGTTTGCGACCGTTGCGGCCAGACTTGTCCTTCTGATGACGGCCATCCAC‑AGCACGCCGTGCTGAGCGCGGCGTGGAAATCAGGCTCGCAGCAAAACCCCGAAGCCTATGAACTCCATCTTTGCGAGAGCTGCTTCTTTGCCACGCTTTCAACGATAAAGCGTGAACGCTGGGCCCAATTGATGTTCTCTGAGGAAGCTGACTCCTTACTCT > NC_002947/5013187‑5013483 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |