| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,162,702 | A→G | 5.7% | intergenic (+177/+24) | PP_4544 → / ← PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,162,702 | 0 | A | G | 5.7% | 321.3 / 6.1 | 105 | intergenic (+177/+24) | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase |
| Reads supporting (aligned to +/- strand): ref base A (51/48); new base G (4/2); total (55/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.30e-01 | |||||||||||
Only 100 of 105 total aligned reads displayed.
GCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCACCGACCCCGC > NC_002947/5162562‑5162845 | cccGACCCCATCCGGCGCTTAAAGCTACTTTTTATCTGTGTCAATTTCCCCGGCCCCTTCGCGGCCTTGCCCTCTCCCACAGTATCACCACAGACCTTGAGAACTTTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAAc < 2:1695397/149‑1 (MQ=25) ttGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGaa < 1:293331/150‑1 (MQ=255) CCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTc < 1:139889‑M1/150‑1 (MQ=255) ccgctcccacaggtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagGGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCATACTACCAATCGAATACCCCGCACCAAACGAGCTCa > 1:344565‑M2/71‑150 (MQ=255) ccgctcccacaggtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCa > 2:2922248‑M2/71‑150 (MQ=255) CCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGgcgc < 2:3042866‑M1/86‑1 (MQ=255) CCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGgcgc > 1:3042866‑M1/1‑86 (MQ=255) CCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCa < 2:2523472‑M1/150‑1 (MQ=255) CCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCa < 1:2043130‑M1/150‑1 (MQ=255) CCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCa < 2:346135‑M1/150‑1 (MQ=255) gctcccacaggtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATc > 2:867464‑M2/69‑123 (MQ=255) gctcccacaggtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATc < 1:867464‑M2/55‑1 (MQ=255) GCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAac < 2:1891809‑M1/150‑1 (MQ=255) tTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCGGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAAGCACACTACCAATCGAATACTCCGCACCAAACGAGCTCAaca < 2:2101969‑M1/149‑1 (MQ=255) tcccacaggtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGaa < 1:1691912‑M2/58‑1 (MQ=255) ccacaggtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagAGGCCGTAACa > 1:3002778‑M2/65‑75 (MQ=255) ccacaggtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagAGGCCGTAACa < 2:3002778‑M2/11‑1 (MQ=255) ccacaggtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCtga > 2:379820‑M2/65‑84 (MQ=255) ccacaggtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCtga < 1:379820‑M2/20‑1 (MQ=255) CCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCGCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATa < 2:1989263‑M1/124‑1 (MQ=255) CCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATcaca < 1:518187‑M1/110‑1 (MQ=255) CCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATcaca > 2:518187‑M1/1‑110 (MQ=255) CCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATc < 1:2478798‑M1/119‑1 (MQ=255) CCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATc > 2:2478798‑M1/1‑119 (MQ=255) CCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATa > 1:1989263‑M1/1‑124 (MQ=255) cacaggtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTAc > 2:1996592‑M2/64‑113 (MQ=255) cacaggtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTAc < 1:1996592‑M2/50‑1 (MQ=255) cacaggtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGcc > 2:1399670‑M2/64‑150 (MQ=255) CACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATc > 2:2909169‑M1/1‑89 (MQ=255) CACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATc < 1:2909169‑M1/89‑1 (MQ=255) CACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTAc < 2:1811310‑M1/113‑1 (MQ=255) CACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTAc > 1:1811310‑M1/1‑113 (MQ=255) CACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCaaa > 2:1681287‑M1/1‑135 (MQ=255) CACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCaaa < 1:1681287‑M1/135‑1 (MQ=255) acaggtacagcacagttctcaaggtctgtggtgatactgtggaagcgggcaagcccgcgaagAGGACGTAACAGACGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGccc > 2:1628655‑M2/63‑150 (MQ=255) ACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTTATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGccc < 2:884561‑M1/150‑1 (MQ=255) ACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGccc < 2:2043437‑M1/150‑1 (MQ=255) ACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGccc < 2:1349279‑M1/150‑1 (MQ=255) tgtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagGGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAAt > 2:2818561‑M2/60‑118 (MQ=255) ggtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagGGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAAt < 1:2818561‑M2/59‑1 (MQ=255) gtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACg > 1:2502676‑M2/59‑150 (MQ=255) tCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAg > 2:1759800/1‑150 (MQ=255) tCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAg > 2:1759526/1‑150 (MQ=255) tCACCACAGACCTTGAGAACTGTGCTGTACCGGGGGGAGCGGGCAAGCCCGCGAAGAGGCCGTACCAGGCGCCTGATGCATTAGAGATGG‑AATAGAATCGCGCGTATAAACAAAGACACGACACCAAACGAGCTCAACACGCCCAACGAg > 2:2201762/1‑150 (MQ=255) acagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAg < 2:2502676‑M2/94‑1 (MQ=255) ccacAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACt > 1:778135/1‑101 (MQ=255) ccacAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACt < 2:778135/101‑1 (MQ=255) cacagttctcaaggtctgtggggatactgtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCtt > 1:1795058‑M2/53‑150 (MQ=255) cacaGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACGGGCGCCTGATGAATCAGCGCTTg > 1:149295/1‑86 (MQ=255) cacaGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACGGGCGCCTGATGAATCAGCGCTTg < 2:149295/86‑1 (MQ=255) cacaGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGaa < 2:437402/93‑1 (MQ=255) cacaGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGaa > 1:437402/1‑93 (MQ=255) acaGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCttt < 2:139889/150‑1 (MQ=255) cagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagGGGCCGTAACAGGCGCCTGATGAATCAGCGCTTg‑cg > 1:601918‑M2/51‑86 (MQ=255) cagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagGGGCCGTAACAGGCGCCTGATGAATCAGCGCTTg‑cg < 2:601918‑M2/36‑1 (MQ=255) agttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTgg < 1:2610829‑M2/101‑1 (MQ=255) aCCTTGAGAACTGCGCTGTACCTGTGGGAGCGGGCAAGCCCGCGACGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGTAGAATCACACTACCAATCGAATACCCTGCACCAAACGAGCTAACCACGCCCAACGAGCCTTTGGcc > 2:139207/1‑150 (MQ=39) cgtGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAg > 1:2124919/3‑150 (MQ=255) cTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGa > 2:2795269/1‑102 (MQ=255) cTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGa < 1:2795269/102‑1 (MQ=255) cTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAg > 2:2429445/1‑150 (MQ=255) ttGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCGAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAgg > 1:2691432/1‑150 (MQ=255) aaCTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATc < 1:2523472/150‑1 (MQ=255) cTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCCATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCt > 2:1188803/1‑150 (MQ=255) tgtgCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGa > 2:1406865/1‑111 (MQ=255) tgtgCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGa < 1:1406865/111‑1 (MQ=255) tgtgCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTg > 2:2814339/1‑150 (MQ=255) tgCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGt > 1:1818608/1‑150 (MQ=255) ggtgatactgtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCTAGGTCATCCTGGTa < 1:2922248‑M2/117‑1 (MQ=255) cTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATcc > 2:2857568/1‑144 (MQ=255) cTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATcc < 1:2857568/144‑1 (MQ=255) tGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACGCTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACa > 1:2683233/1‑150 (MQ=255) tGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACa > 2:1999181/1‑150 (MQ=255) tACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAgg > 2:1911809/1‑150 (MQ=255) ccTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACCGGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTg > 1:2970148/1‑150 (MQ=255) gtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATa < 2:1225578‑M2/60‑1 (MQ=255) gtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATa > 1:1225578‑M2/25‑84 (MQ=255) gtgggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGaa > 2:2658216‑M2/25‑150 (MQ=255) ggggAGCGGCACACCCCGTGAAGAGGCCGTAACAGGCGCCTGATGAATCAGAGCTCGCCGCCG‑GTGATCTGATCAAGCGCATACCCCGCACCAACCGCGCTCAACACGCCAAATGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAg < 1:2995008/149‑1 (MQ=255) gggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAgg < 1:2201762‑M2/128‑1 (MQ=255) gggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAgg < 2:1795058‑M2/128‑1 (MQ=255) gggagcgggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAgg < 1:2814339‑M2/128‑1 (MQ=255) gggagcgggcaagcccgcgaagAGGCCGTAACAGCCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCTAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAgg < 1:139207‑M2/128‑1 (MQ=255) ttcgcgggcttgcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGc > 2:2111896‑M2/22‑150 (MQ=255) gcgggcaagcccgcgaagGGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAAt > 1:1901197‑M2/19‑150 (MQ=255) gggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTAACAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCa > 2:1297320‑M2/17‑150 (MQ=255) ggcaagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCAc < 2:1818608‑M2/135‑1 (MQ=255) aagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCGAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCACCGa < 2:2691432‑M2/138‑1 (MQ=255) aagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAacac > 1:962826‑M2/13‑96 (MQ=255) aagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCACCGa > 2:955222‑M2/13‑150 (MQ=255) aagcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCACCGa < 2:2043130‑M2/138‑1 (MQ=255) gcccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCACCGAcc < 1:2111896‑M2/140‑1 (MQ=255) ccgcgaagAGGCCGTAACAGGCGCCTGATTAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCACCGAcccc > 1:2862385‑M2/9‑150 (MQ=255) ccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATc < 2:1484800‑M2/111‑1 (MQ=255) ccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATc > 1:1484800‑M2/9‑119 (MQ=255) ccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCACCGAcccc > 1:2240592‑M2/9‑150 (MQ=255) ccgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCACCGAcccc > 1:1245492‑M2/9‑150 (MQ=255) cgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAg < 2:2738244‑M2/105‑1 (MQ=255) cgcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAg > 1:2738244‑M2/8‑112 (MQ=255) gcgaagAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCACCGACCccgc > 2:1132576‑M2/7‑150 (MQ=255) | GCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTG‑CGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCACCGACCCCGC > NC_002947/5162562‑5162845 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |