| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,212,537 | C→G | 6.5% | intergenic (+53/+41) | PP_4593 → / ← PP_4594 | hypothetical protein/cystathionine gamma‑synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,212,537 | 0 | C | G | 6.5% | 430.3 / 18.7 | 138 | intergenic (+53/+41) | PP_4593/PP_4594 | hypothetical protein/cystathionine gamma‑synthase |
| Reads supporting (aligned to +/- strand): ref base C (66/63); new base G (5/4); total (71/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.98e-01 | |||||||||||
Only 100 of 145 total aligned reads displayed.
GGCACCAACGACGAAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGCTGATCCCCATCA > NC_002947/5212392‑5212684 | ggCACCAACGACGAAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACcgtcg < 1:414345/150‑1 (MQ=255) cACCAACGACGAAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTa < 1:931246/150‑1 (MQ=255) aCCAACGACGAAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAg < 2:3003742/150‑1 (MQ=255) acgaAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGACGGT‑GTAGGAGCggg < 2:1310614/150‑1 (MQ=255) gaAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCggg > 1:1940509/1‑148 (MQ=255) gaAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCggg < 2:1940509/148‑1 (MQ=255) gaAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGtt < 2:2918338/150‑1 (MQ=255) gCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTAc > 1:2774796/1‑150 (MQ=255) cGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTAccc < 1:2099693/150‑1 (MQ=255) gTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGCAGCGGGTTTAcccc > 1:2432042/1‑149 (MQ=255) ccGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGaaa < 1:1032777/150‑1 (MQ=255) cTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGc > 2:310620/1‑150 (MQ=255) tGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGcc > 2:1705413/1‑150 (MQ=255) aaGGAGAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAGTCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCgg < 1:2930143/150‑1 (MQ=255) aaGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCCCTCCTAC‑CCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCgg < 2:1203778/150‑1 (MQ=255) aaGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGACCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCgg > 2:1292750/1‑150 (MQ=255) aGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGc < 2:668681/150‑1 (MQ=255) ggAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGcc > 1:1385117/1‑150 (MQ=255) gAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGccc < 1:2659499/150‑1 (MQ=255) gAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGccc < 1:2659676/150‑1 (MQ=255) aaaGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCt > 2:2157476/1‑150 (MQ=255) aaaGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCt < 2:2790300/150‑1 (MQ=255) gTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTcaca < 1:232279/150‑1 (MQ=255) cTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACcgtc < 1:770805/104‑1 (MQ=255) cTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACcgtc > 2:770805/1‑104 (MQ=255) cTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGc < 1:2189213/150‑1 (MQ=255) tGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCg > 1:2026596/1‑150 (MQ=255) gATCAAGGACAAGATCGAACGGATCATTCATCCGCCTAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGa < 1:2892102/150‑1 (MQ=255) gATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGa > 1:717357/1‑150 (MQ=255) aGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAgc > 1:1357943/1‑150 (MQ=255) aGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAgc > 1:1284862/1‑150 (MQ=255) ggACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCT‑ACACAGCGACCAgcgc > 2:2769859/1‑150 (MQ=255) gACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAgcgc > 1:2549265/1‑150 (MQ=255) aaGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGACCGCTCCTAC‑ACCGTCGTAGGAGCgg > 1:688127/1‑102 (MQ=255) aGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGTCATCTATTGAATCCACCGGCCTCTTCGCGGGCACGCCCAATCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCCCACACCGCGACCAGCGCTTTc > 1:1023340/1‑150 (MQ=39) gATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCa > 1:85956/1‑150 (MQ=255) aTCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGACGGT‑GTAGGAGCgggc < 1:1626596/101‑2 (MQ=37) aTCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGACGGT‑GTAGGAGCgggc > 2:1626596/1‑100 (MQ=37) cGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGcccc < 1:152816/150‑1 (MQ=255) ggATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCa > 1:1082596/1‑150 (MQ=255) gATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCAt > 2:117863/1‑150 (MQ=255) gATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCAt > 1:487316/1‑150 (MQ=255) aTCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATc > 1:2244748/1‑150 (MQ=255) tcattcatCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACcgtcg > 1:3020468/1‑80 (MQ=255) attcatCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCtt > 2:15458/1‑134 (MQ=255) tcatCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGt < 2:1465679/150‑1 (MQ=255) atCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTcc < 1:1684529/150‑1 (MQ=255) tctgCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGACGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCt > 1:2124177/4‑150 (MQ=255) gCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAgc < 2:437219/122‑1 (MQ=255) ccAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGAcc > 1:409912/1‑150 (MQ=255) cAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGTAAACCCGCTCCTAC‑GACGGTGTAGGAGCGGGcttgc < 1:2185836/82‑3 (MQ=17) aaaTCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGc < 1:47731/93‑1 (MQ=255) aaaTCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGc > 2:47731/1‑93 (MQ=255) aTCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGt < 1:1763713/150‑1 (MQ=255) aTCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGt > 2:1510518/1‑150 (MQ=255) tCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTc > 2:2081198/1‑150 (MQ=255) ccTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCa < 1:117863/150‑1 (MQ=255) gACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACgg < 2:1357943/150‑1 (MQ=255) gACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACgg < 1:2081198/150‑1 (MQ=255) cATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATcc < 2:957902/150‑1 (MQ=255) aTCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCt < 1:998493/150‑1 (MQ=255) aTCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCt < 2:2244748/150‑1 (MQ=255) tATTGACCCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑GCCGTCGTAGGAGCGGGTCTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCACCGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGa < 2:2913776/150‑1 (MQ=255) aTTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGAt < 2:2026596/150‑1 (MQ=255) ttGAATCCACCGGCCTCTTCGCGGGCAAGCCAGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATc > 1:992174/1‑150 (MQ=255) aTCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTa < 2:717357/150‑1 (MQ=255) aCCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGTGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGAc > 2:634254/1‑120 (MQ=255) cGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCgg < 1:2748885/70‑1 (MQ=255) ggCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACaa > 1:211164/1‑150 (MQ=255) tctTCGCGGGCAAGCCCGCTCCTCC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATc < 2:2256162/101‑1 (MQ=255) tctTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGc < 1:316837/77‑1 (MQ=255) tctTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATc > 1:2256162/1‑101 (MQ=255) tctTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCgc < 1:1705413/150‑1 (MQ=255) ttCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCgcag < 1:310620/150‑1 (MQ=255) gcgGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGcagcag < 2:2426410/150‑1 (MQ=255) ggCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGtt > 2:3071455/1‑150 (MQ=255) gCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTtc < 2:2774796/150‑1 (MQ=255) cAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTCCCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTtct < 1:1527790/150‑1 (MQ=255) aaacccGCTCCTAC‑GACGGTGTAGGAGCGGGCTTGCCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTtctc > 1:2114323/4‑150 (MQ=38) aaGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTtctc > 1:654954/1‑150 (MQ=255) aacccGCTCCTACGACGGT‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGtt > 2:796690/3‑146 (MQ=39) cccGCTCCTACGACGGT‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGCt > 1:1772011/1‑150 (MQ=255) ccGCTCCTACGACGGT‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTc < 2:550134/95‑1 (MQ=38) ccGCTCCTACGACGGT‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTc > 1:550134/1‑95 (MQ=38) ccGCTCCTACGACGGT‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCa > 2:2604640/1‑100 (MQ=38) ccGCTCCTACGACGGT‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCa < 1:2604640/100‑1 (MQ=38) ccGCTCCTAC‑GACGGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACg > 1:1548069/1‑107 (MQ=38) ccGCTCCTAC‑GACGGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACg < 2:1548069/107‑1 (MQ=38) cTCCTAC‑GACGGTGTAGGAGCGGGCTTGCCCGCGAAAGGGCATGGGGCCCTGACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGATAATCCTCGATCCCTACCGACAACCGCAGCAGCTTCTCGCGGATc > 2:501802/1‑150 (MQ=37) cTCCTAC‑ACCGGCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGCTGATc < 2:372909/150‑1 (MQ=255) tCCTAC‑ACCGTCTTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGCTGATcc < 1:553845/150‑1 (MQ=255) cTAC‑ACCGTCGTAGGAGCGGGTTTACTCGCGAAAGGGCCTGCGGCCCTGACACAGCGACCAGCGCATTCAACGCCCCATCCAGAACCTCGACCAGGTCACGGTAATCCACGATCACTACCGACAACAGCAGCAGGTTCTCACTGATtccc > 2:2178082/1‑150 (MQ=255) cTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGCTGATcccc < 2:2929331/150‑1 (MQ=255) ac‑acCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTca > 1:1613819/1‑48 (MQ=255) c‑acCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATcc > 2:272797/1‑105 (MQ=255) c‑acCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATcc < 1:272797/105‑1 (MQ=255) c‑acCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGa < 2:2461758/109‑1 (MQ=255) acCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGc < 1:260153/138‑1 (MQ=255) acCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGCTGATCCCCATCa > 1:2871757/1‑150 (MQ=255) cgtcgtAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAgg > 1:776033/1‑78 (MQ=255) | GGCACCAACGACGAAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGCTGATCCCCATCA > NC_002947/5212392‑5212684 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |