| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,354,706 | T→C | 7.8% | G11G (GGA→GGG) noncoding (17/97 nt) |
rpsO ← PP_mr54 ← |
30S ribosomal protein S15 S15 regulatory region |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,354,706 | 0 | T | C | 7.8% | 331.0 / 13.0 | 117 | G11G (GGA→GGG) noncoding (17/97 nt) | rpsO PP_mr54 | 30S ribosomal protein S15 S15 regulatory region |
| Reads supporting (aligned to +/- strand): ref base T (59/48); new base C (3/6); total (62/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.24e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
GGCCTTGCAGCTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCG > NC_002947/5354561‑5354852 | cTTGCAGCTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTCTTCCGTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCAt > 1:1722028/1‑150 (MQ=255) cTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCggg < 1:651473/148‑1 (MQ=255) cTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCggg > 2:651473/1‑148 (MQ=255) ttgttgATGTTTGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTTAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTc < 2:2929993/150‑1 (MQ=255) ttgttgATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTc > 1:121526/1‑150 (MQ=255) tgttgATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGACCCCGCATGCGGGATcc < 2:1845433/150‑1 (MQ=255) gttgATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGACCCCGCATGCGGGATccg < 2:1373494/150‑2 (MQ=255) tgATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAAt > 2:2358150/1‑150 (MQ=255) gATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCgggg < 2:1251604/143‑1 (MQ=255) gATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCgggg > 1:1251604/1‑143 (MQ=255) gATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATa > 2:1534125/1‑150 (MQ=255) aTGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAg < 2:2681471/150‑1 (MQ=255) aTGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCAGCATGAGGGGTCCAATAg < 2:2349402/150‑1 (MQ=255) aTGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGACCCCGCATGCGGGATcc < 2:440999/145‑1 (MQ=255) tGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGGTCCCGCATGCGGGGTCCAATAgg < 2:2788145/150‑1 (MQ=255) gTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGACCCCGCATGCGGGATccgttatca < 2:2500521/150‑8 (MQ=255) tGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCa < 2:1261207/150‑1 (MQ=255) tGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCa < 1:2358150/150‑1 (MQ=255) ggTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGa < 2:2417635/150‑1 (MQ=255) agcagAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGTGTCCAATAGGCCAGGGACaca > 1:198177/1‑148 (MQ=255) agcagAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACaaa > 1:1980178/1‑150 (MQ=255) agcagAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACaaa < 2:2562522/150‑1 (MQ=255) agagCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATcc < 2:887103/150‑1 (MQ=255) gagCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATccc > 1:2902295/1‑150 (MQ=255) agCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCt > 1:1653803/1‑150 (MQ=255) cAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGt > 2:847781/1‑150 (MQ=255) cAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGACCCCGCATGCGGGATccgtt < 1:935449/129‑4 (MQ=255) aCCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTAt < 2:2517045/150‑1 (MQ=255) cTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGa > 1:271692/1‑135 (MQ=255) gggCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCggg > 1:2899625/1‑108 (MQ=255) gggCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCggg < 2:2899625/108‑1 (MQ=255) ggCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGgt < 2:2265215/150‑1 (MQ=255) ggCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGgt < 2:699695/150‑1 (MQ=255) tACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGtgtg > 2:2761688/1‑150 (MQ=255) tACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGtgtg > 2:433552/1‑150 (MQ=255) tACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGACCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAAt > 1:108035/1‑126 (MQ=255) aCCGGTATCGCCGGCGGCTTGCTGATATTCGGCAAAGATCTGAGCTTTTTATTCAACGCTGAGAACCATCTGGCTTCTCCTGATAATTTATCGTGTATGCGGGGTCCAATAGGCCAGGTACAAATCCCTGTATTAATAAAAAAGGTGTGa < 2:1120753/150‑1 (MQ=255) ccGGTATCGCCGGCGGCTTGCTGATATTCAGCAACGAAACGTGGACTTAGTCCAACGCTGAGGGCCCTGTGTGGTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCATGGACAAAGCCCGGTATTAATAAAAAAGGTGTGAc > 1:534984/1‑150 (MQ=255) cGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGAcc < 2:826219/150‑1 (MQ=255) gTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGt < 2:1381065/150‑1 (MQ=255) aTCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGc < 1:2761688/150‑1 (MQ=255) ccGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCGTGATAACGGAAACCAAATCCAGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCtgc < 2:1285367/150‑3 (MQ=255) ccGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTAc < 1:433552/150‑1 (MQ=255) cggcggCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACt > 1:2218835/1‑150 (MQ=255) ttGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGACCCCGCATGCGGGATcc > 1:3031560/1‑89 (MQ=255) ttGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGACCCCGCATGCGGGATcc < 2:3031560/89‑1 (MQ=255) cTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCAcc > 2:1308892/1‑150 (MQ=255) cTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCAcc > 2:3030222/1‑150 (MQ=255) tGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCAccc > 2:1844225/1‑150 (MQ=255) tGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCAccc > 2:1158580/1‑150 (MQ=255) gATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTcc < 2:1701441/84‑1 (MQ=255) gATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTcc > 1:1701441/1‑84 (MQ=255) gATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGAc < 2:1963696/98‑1 (MQ=255) gATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGAc > 1:1963696/1‑98 (MQ=255) gATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATtaat < 2:1707276/114‑1 (MQ=255) gATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGAACGTGCCTACTGACAGCCGCCCt < 2:1653803/150‑1 (MQ=255) atTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGa > 1:2791947/1‑150 (MQ=255) gCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCg > 2:2269480/1‑150 (MQ=255) cAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGt < 2:1482263/150‑1 (MQ=255) tGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCg > 2:2444314/1‑150 (MQ=255) gAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGTATGCGGGGTCCAATAg > 1:527076/1‑71 (MQ=255) gAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGTATGCGGGGTCCAATAg < 2:527076/71‑1 (MQ=255) gAGCTTTTTCTTCAACGCTGAGGGCAATGTTGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGCggggtcagg > 1:83887/1‑145 (MQ=255) tttCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTg > 2:1730291/1‑150 (MQ=255) ttcttcAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGc < 1:1844225/150‑1 (MQ=255) cttcAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCt < 1:1158580/150‑1 (MQ=255) ttcAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTg > 1:840013/1‑150 (MQ=255) ttcAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTg > 1:2486595/1‑150 (MQ=255) tcAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGt < 2:501904/130‑1 (MQ=255) tcAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGt > 1:501904/1‑130 (MQ=255) tcAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGa > 2:2065083/1‑150 (MQ=255) tcAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCGACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGa > 1:958089/1‑150 (MQ=255) aaCGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGt > 2:2135364/1‑100 (MQ=255) aaCGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGt < 1:2135364/100‑1 (MQ=255) aCGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGAccc > 1:766444/1‑150 (MQ=255) gAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCgg < 2:840013/150‑1 (MQ=255) ggCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGttt < 1:2444314/150‑1 (MQ=255) cATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCgg < 1:1534125/150‑1 (MQ=255) aTGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACACTCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGt < 1:858054/150‑1 (MQ=255) gCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGt > 1:1121357/1‑82 (MQ=255) gCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGt < 2:1121357/82‑1 (MQ=255) gCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTc < 1:1308892/150‑1 (MQ=255) cTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATtaataa < 1:2407957/60‑1 (MQ=255) cTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCACAGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTccgaccga > 1:2858442/1‑150 (MQ=255) tGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCg > 1:496805/1‑135 (MQ=255) tGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCg < 2:496805/135‑1 (MQ=255) tGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGaa > 1:244501/1‑150 (MQ=255) tGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCCGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCg < 1:2406593/135‑1 (MQ=255) tGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCCGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCg > 2:2406593/1‑135 (MQ=255) tGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGAAAAATCACTGTATGAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGaa > 1:536861/1‑150 (MQ=255) aTAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATc > 1:2084529/1‑150 (MQ=255) tAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCa < 2:2084529/150‑1 (MQ=255) aaCGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAg < 1:1730291/150‑1 (MQ=255) aCGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACCCCCACGAGGACATGATGCCGGGGGGCGTGGGAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGc > 1:1594201/1‑150 (MQ=255) cGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGcc > 2:2223577/1‑150 (MQ=255) ggATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGAc < 1:1602882/116‑1 (MQ=255) ggATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGAc > 2:1602882/1‑116 (MQ=255) ggATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCgg > 1:1612652/1‑129 (MQ=255) ggATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCgg < 2:1612652/129‑1 (MQ=255) ggATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCg > 1:2848883/1‑150 (MQ=255) | GGCCTTGCAGCTTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTCCTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCG > NC_002947/5354561‑5354852 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |