| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 407,666 | A→C | 6.8% | A114A (GCT→GCG) | aceF ← | AceF‑S‑acetyldihydrolipoate |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 407,666 | 0 | A | C | 6.8% | 370.6 / 16.6 | 131 | A114A (GCT→GCG) | aceF | AceF‑S‑acetyldihydrolipoate |
| Reads supporting (aligned to +/- strand): ref base A (60/62); new base C (4/5); total (64/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.16e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
GACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAG > NC_002947/407517‑407815 | gACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGgca < 2:920695/150‑1 (MQ=255)gACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGgca < 1:1238253/150‑1 (MQ=255) cGGTATTTCCATGGAGGCCTTGTCGGGCTACAGGATACGTGTGAACTTGTCGTCTTCGACGGTGTCGCCGAGTGGTTCCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGgcagc < 1:2214515/150‑1 (MQ=255) gggATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGgcagca > 2:1908874/1‑150 (MQ=255) ggATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGcagcag > 2:1849092/1‑150 (MQ=255) aTTTCCATGGAGGCCTTGTCGGACTCCAGTGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGcc > 1:1639863/1‑150 (MQ=255) ttCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCCGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCgg < 2:738600/150‑1 (MQ=255) ttCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCCGCAGcccc < 1:559902/150‑3 (MQ=255) ccATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCgggg < 2:1750779/150‑1 (MQ=255) ccATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCgggg < 1:1132379/150‑1 (MQ=255) aTGGAGGCCTGGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCt < 1:2161566/150‑1 (MQ=255) aGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGgca < 2:209125/134‑1 (MQ=255) aGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGgca > 1:209125/1‑134 (MQ=255) aGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCgg < 1:2752906/150‑1 (MQ=255) ggCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGc > 1:1074539/1‑150 (MQ=255) gCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGcc > 1:1065208/1‑150 (MQ=255) ccTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCg < 1:1477364/150‑1 (MQ=255) cTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCgg > 2:1987791/1‑150 (MQ=255) cTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCgg < 1:2342142/150‑1 (MQ=255) tCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCgg > 2:2531775/1‑134 (MQ=255) tCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCgg > 2:2529988/1‑134 (MQ=255) tCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCgg < 1:2531775/134‑1 (MQ=255) tCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCGGACTTTTACCAGAACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGa > 2:2891967/1‑150 (MQ=255) tCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGag > 1:2603380/1‑142 (MQ=255) tCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGa > 2:1877732/1‑141 (MQ=255) tCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGa < 1:1877732/141‑1 (MQ=255) tCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGACGTCCCGCACGTGGAGGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGa < 2:418510/150‑1 (MQ=255) cAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGgca > 1:1318847/1‑118 (MQ=255) cAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGc < 2:125688/150‑1 (MQ=255) cAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGc > 2:1173876/1‑150 (MQ=255) cAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGc > 2:454309/1‑150 (MQ=255) aGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGTACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCg > 2:803982/1‑150 (MQ=255) ggTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCCGCAGCCCCGGCTGctgc > 2:2135952/1‑129 (MQ=255) ggTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGc > 1:1086907/1‑150 (MQ=255) ggTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGc > 1:1508554/1‑150 (MQ=255) gACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGgct < 1:1745336/150‑1 (MQ=255) gTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGgctggcgc > 2:2329808/1‑150 (MQ=255) cGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGgctggccggc < 1:2891967/150‑5 (MQ=255) gCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGgctggcgctggc > 2:2711481/1‑150 (MQ=255) cTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGctggcgctggcg > 1:2501715/1‑150 (MQ=255) ttCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCtggcgctggcgc < 1:2033560/150‑1 (MQ=255) ttCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGAGCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCtggcgctggcgc > 1:184717/1‑150 (MQ=255) gACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGc > 1:1834946/1‑126 (MQ=255) gtCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCgg > 1:317235/1‑150 (MQ=255) tCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGa < 1:2711481/150‑1 (MQ=255) tCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGa < 2:1065208/150‑1 (MQ=255) gCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCCGCAGCCCCGGCTGCTGcca < 2:2996656/101‑2 (MQ=255) gCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGc < 2:1641392/99‑1 (MQ=255) gCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGc > 1:1641392/1‑99 (MQ=255) gCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGagc > 1:2388818/1‑150 (MQ=255) gCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGagc > 2:2132435/1‑150 (MQ=255) tttGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGgc > 1:683731/1‑150 (MQ=255) ttGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGgca < 1:2329808/150‑1 (MQ=255) aCCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGgcagca < 2:2501715/150‑1 (MQ=255) cAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCagcagc > 2:2194938/1‑150 (MQ=255) aCTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCAAGTGGATGACGTTCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGgc > 1:2066942/1‑150 (MQ=255) ttCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCCGCAGCCCCGGCTGCTGcca < 2:1104080/83‑2 (MQ=38) ttCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCgg < 1:2921926/72‑1 (MQ=255) ttCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGcc > 1:2514730/1‑82 (MQ=255) ttCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGgcgc > 2:2041703/1‑150 (MQ=255) ttCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGgcgc < 1:813963/150‑1 (MQ=255) atgatCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCa > 1:2885449/1‑150 (MQ=255) tgatCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAg < 1:2132435/150‑1 (MQ=255) tacctcggCCTTGCCCGACGCACCGGTGTCCCCCACGTCGATGTCCTGCACGCTGGTATTAGCCGGGGCCGCGGCCCGATCAGCACTACCCTCTTCGGCGGCTGCCGCTCGCGCCCCAGGCGGAGCAGCGCCAGCAGCCGGCGCCTCAgg < 2:63563/144‑1 (MQ=255) cTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑Gc > 1:2006129/1‑150 (MQ=255) tGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGgcgc < 2:2048411/139‑1 (MQ=255) tGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGgcgc > 1:2048411/1‑139 (MQ=255) ccTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGCGCGGCTTCAGCgg > 1:1727684/1‑93 (MQ=255) ccTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCgg < 2:1727684/93‑1 (MQ=255) ccTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCgcag < 1:1157134/150‑1 (MQ=255) gCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCagcagc > 2:2715491/1‑150 (MQ=255) gCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCagcagc > 2:2160733/1‑150 (MQ=255) cccaccgaACCGATGTCCGGCACGTGGATGTCCTGTACTCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGCGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAgcg < 1:939218/145‑1 (MQ=255) cccGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGc < 1:676865/80‑1 (MQ=255) cgacgaACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCCGCAGcccc > 2:947001/1‑49 (MQ=255) acgaACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGgcgc < 2:317235/150‑1 (MQ=255) aaCCGATGTCCGGCACGTGGAAGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGCGCCGCTGCTGCGGcccct < 2:1579445/150‑2 (MQ=255) aCCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTc < 2:1086907/150‑1 (MQ=255) cGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCTGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCgg > 2:655178/1‑150 (MQ=255) cGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCgg > 2:1670199/1‑78 (MQ=255) tGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCtt > 2:1505011/1‑150 (MQ=255) tCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTcc < 2:2388818/150‑1 (MQ=255) cGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCa < 1:310763/67‑1 (MQ=255) cGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCa > 2:310763/1‑67 (MQ=255) aCGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGAcc > 2:2505014/1‑150 (MQ=255) gTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGagc > 2:2073090/1‑90 (MQ=255) gTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACcag < 1:1919331/150‑1 (MQ=255) tGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACcagc > 2:1903843/1‑150 (MQ=255) ccTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGAc > 2:2472135/1‑139 (MQ=255) ccTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGAc < 1:2472135/139‑1 (MQ=255) cTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCg > 2:1850647/1‑46 (MQ=255) cTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCg < 1:1850647/46‑1 (MQ=255) cTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTtcgtc > 2:2169512/1‑150 (MQ=255) gCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGc < 2:683731/150‑1 (MQ=255) gCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCcttc > 2:685621/1‑150 (MQ=255) tGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCcttctt < 2:1893206/150‑1 (MQ=255) tGGCAGCAACCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCgg < 1:471098/88‑1 (MQ=255) gcagcaGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGgctggcgctggc < 2:2984684/57‑1 (MQ=255) gcagcaGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGgctggcgctggc > 1:2984684/1‑57 (MQ=255) agcagcCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAg > 1:2862659/1‑150 (MQ=255) | GACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAG > NC_002947/407517‑407815 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |