| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,422,811 | C→T | 5.5% | intergenic (‑44/+106) | tesB ← / ← PP_4763 | acyl‑CoA thioesterase II/acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,422,811 | 0 | C | T | 5.5% | 441.2 / 10.1 | 145 | intergenic (‑44/+106) | tesB/PP_4763 | acyl‑CoA thioesterase II/acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (72/65); new base T (5/3); total (77/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.56e-01 | |||||||||||
Only 100 of 160 total aligned reads displayed.
CGTAAAGCTGGCGGAAGCCCAGGTCCTGGCTACGTCCACGGAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGG > NC_002947/5422662‑5422959 | tAAAGCTGGCGGAAGCCCAGGTCCTGGCTACGTCCACGGAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCg > 1:2026873/1‑150 (MQ=255) gCTGGCGGAAGCCCAGGTCCTGGCTACGTCCACGGAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAgcg > 2:264420/1‑150 (MQ=255) cTGGCGGAAGCCCAGGTCCTGGCTACGTCCACGGAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAgcgg > 2:2889622/1‑150 (MQ=255) cTGGCGGAAGCCCAGGTCCTGGCTACGTCCACGGAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAgcgg < 1:1373186/150‑1 (MQ=255) tGGCGGAAGCCCAGGTCCTGGCTACGTCCACGGAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAgcggc > 2:76026/1‑150 (MQ=255) cGGAAGCCCAGGTCCTGGCTACGTCCACGGAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCt > 1:1161836/1‑150 (MQ=255) gAAGCCCAGGTCCTGGCTACGTCCACGGAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAgcggc < 2:2354043/145‑1 (MQ=255) ggCTACGTCCACGGAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAg > 2:1633658/1‑127 (MQ=255) gCTACGTCCACGGAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTg > 1:1649335/1‑150 (MQ=255) aCGTCCACGGAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACATGCGCTGAAc < 1:1549339/150‑1 (MQ=255) cACGGAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGtt < 1:725467/150‑1 (MQ=255) cACGGAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGtt > 2:3016501/1‑150 (MQ=255) aCGGAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGA‑GCGCCGCTCGGGCGgcgcatcgc > 2:2477170/1‑122 (MQ=255) ggAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGACCGTGTTACg > 1:132422/1‑150 (MQ=255) gAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACgg < 2:2609205/150‑1 (MQ=255) gAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACgg < 2:1419768/150‑1 (MQ=255) cAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCa < 1:264420/150‑1 (MQ=255) aGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCaa < 1:146089/150‑1 (MQ=255) aGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACACGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCaa < 1:240436/150‑1 (MQ=255) gTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAgc > 1:52032/1‑150 (MQ=255) gTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCAAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAgc > 1:2365955/1‑150 (MQ=255) ctcGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTca > 2:197963/1‑117 (MQ=255) ctcGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTc > 2:928576/1‑150 (MQ=255) ctcGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTc > 1:621507/1‑150 (MQ=255) ctcGATGGATTCGAGGCTCAACAGGTCGACCAGCACGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGAGAGCCATGCACGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTc > 1:1023956/1‑150 (MQ=39) tcGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGAtt > 2:2651917/1‑113 (MQ=255) tGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAg < 1:620447/115‑1 (MQ=255) tGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAg > 2:620447/1‑115 (MQ=255) ggATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTa < 1:1918191/150‑1 (MQ=255) aTTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCCCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAgg < 1:1962157/150‑1 (MQ=255) ttCGAGGCTCAACGGGTCGCCCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGc < 1:1405770/150‑1 (MQ=255) gAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCtt < 1:2555193/137‑1 (MQ=255) gAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTc < 1:2472482/138‑1 (MQ=255) gAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTc > 2:2472482/1‑138 (MQ=255) tCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTa > 1:2856580/1‑139 (MQ=255) tCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATa < 2:621507/150‑1 (MQ=255) tCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATa > 1:935066/1‑150 (MQ=255) aGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAg < 1:1207223/98‑1 (MQ=255) aGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAg > 2:1207223/1‑98 (MQ=255) gTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTa < 2:828646/111‑1 (MQ=255) gTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTa < 1:2937903/132‑1 (MQ=255) gTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGtt < 2:2541289/150‑1 (MQ=255) gTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGtt > 1:496679/1‑150 (MQ=255) ccAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCa > 1:1530905/1‑150 (MQ=255) ccAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCa > 2:1457500/1‑150 (MQ=255) cAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCAt > 1:2341796/1‑150 (MQ=255) ggTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACgtgt > 2:1297118/1‑101 (MQ=255) ggTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACgtgt < 1:1297118/101‑1 (MQ=255) ggTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAAt > 2:301383/1‑131 (MQ=255) ggTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAAt < 1:301383/131‑1 (MQ=255) gtcCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCAc > 2:373107/1‑150 (MQ=255) gtcCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCAc > 2:1472549/1‑150 (MQ=255) gtcCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCAc < 1:76026/150‑1 (MQ=255) tctaaCACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCAcc > 2:1173754/4‑150 (MQ=255) tcCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCAcc > 1:437587/1‑150 (MQ=255) cAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACgg < 2:2861823/99‑1 (MQ=255) cAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACgg > 1:2861823/1‑99 (MQ=255) aaCACATGACTCATCGGCGGTTCCCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCggg > 1:95316/1‑150 (MQ=255) acaTGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCa > 1:2211941/1‑142 (MQ=255) acaTGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCAt < 2:2365955/150‑1 (MQ=255) aTGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGaa > 2:263914/1‑83 (MQ=255) aTGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGaa < 1:263914/83‑1 (MQ=255) aTGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATgg > 1:276253/1‑150 (MQ=255) tCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAg > 2:1330302/1‑107 (MQ=255) tCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAg < 1:1330302/107‑1 (MQ=255) tCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCAt > 1:889851/1‑150 (MQ=255) cggcggTTCTCCGTAGGAGCGAGCCTAGCTAGACCTTGATGTCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCAtt < 2:1023956/150‑1 (MQ=255) ggcggTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTc > 1:2703578/1‑150 (MQ=255) gTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGgc < 2:935066/150‑1 (MQ=255) tcCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGc < 2:2131187/128‑1 (MQ=255) tcCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGc > 1:2131187/1‑128 (MQ=255) cccGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGgcgcgc > 2:2108640/2‑150 (MQ=255) ccGTAGGATCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGGGTTACGGGCAAGCGCCTTCCAAGTAGGCAGCAAACTGGGCGTTTGTCATTCGCACCGGGCATGGCTGTGCAGTCGGgcgcgcg > 1:1724004/1‑149 (MQ=37) cGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAg > 2:309816/1‑150 (MQ=255) gTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAgg < 2:889851/150‑1 (MQ=255) aGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGt < 1:928576/150‑1 (MQ=255) gagcgagcCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTgc > 1:1824224/1‑150 (MQ=255) agcCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATgg > 1:1352447/1‑120 (MQ=255) ccTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCNTTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCa < 1:2016916/150‑1 (MQ=255) cTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAg > 2:1348284/1‑129 (MQ=255) tAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCAt < 1:2192542/101‑1 (MQ=255) tAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCAt > 2:2192542/1‑101 (MQ=255) tAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGt < 1:3016501/150‑1 (MQ=255) tAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGt > 2:2918829/1‑150 (MQ=255) cTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTgcg > 2:1613526/1‑150 (MQ=255) cgcgATGCGCCGCCCGAGCGGCGCTCGATTTCACCGGCGCTGAACGGGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATCATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGTATTCAGGCGCGCAGGGTGCGCTCCCAGTgcgcg > 2:1266215/1‑150 (MQ=255) gcgATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTgcgc > 2:503876/1‑148 (MQ=255) tcgagcgcCGCTCGGGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCtgt > 1:2335235/5‑113 (MQ=38) tcgagcgcCGCTCGGGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCtgt < 2:2335235/109‑1 (MQ=38) tGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTc < 2:1840856/150‑1 (MQ=255) agcgcCGCTCGGGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTTATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTc > 1:1621858/2‑150 (MQ=255) gccgccCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCtg < 2:1846593/106‑1 (MQ=255) gccgccCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCtg > 1:1846593/1‑106 (MQ=255) gccgccCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGgcg < 1:1461509/118‑1 (MQ=255) gccCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCg > 1:1762502/1‑150 (MQ=255) gccCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCg > 2:1239892/1‑150 (MQ=255) cccGAGCGTCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCtgt > 2:2059336/1‑103 (MQ=255) cccGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTACGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCgg < 1:1133827/150‑1 (MQ=255) ccGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCa < 2:78349/130‑1 (MQ=255) ccGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCa > 1:78349/1‑130 (MQ=255) | CGTAAAGCTGGCGGAAGCCCAGGTCCTGGCTACGTCCACGGAACAGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGG > NC_002947/5422662‑5422959 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |