| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,427,551 | C→T | 6.0% | A200A (GCG→GCA) | rhlE‑I ← | ATP‑dependent RNA helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,427,551 | 0 | C | T | 6.0% | 398.8 / 10.5 | 134 | A200A (GCG→GCA) | rhlE‑I | ATP‑dependent RNA helicase |
| Reads supporting (aligned to +/- strand): ref base C (65/61); new base T (4/4); total (69/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.56e-01 | |||||||||||
Only 100 of 137 total aligned reads displayed.
AACACCAGCACCTGCTTCCAGCGCTGCTTGCGCAGCAGGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGG > NC_002947/5427402‑5427699 | aaCACCAGCACCTGCTTCCAGCGCTGCTTGCGCAGCAGGTGGCAGACCAGATCAGCTAAGCGCTTGTGGCCGACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAgc < 1:1136997/150‑1 (MQ=255)aaCACCAGCACCTGCTTCCAGCGCTGCTTGCGCAGCAGGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAgc < 2:46166/150‑1 (MQ=255) cAGCACCTGCTTCCAGCGCTGCTTGCGCAGCAGGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTTCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAg > 2:2094519/1‑150 (MQ=255) cAGCACCTGCTTCCAGCGCTGCTTGCGCAGCAGGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAg > 2:2483223/1‑150 (MQ=255) aCCTGCTTCCAGCGCTGCTTGCGCAGCAGGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGcccc > 2:2988227/1‑150 (MQ=255) cTGCTTCCAGCGCTGCTTGCGCAGCAGGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTAGCGCGGGCTCACTGCGATACGTAGGGGGTCATTCAGCGCCAGCCCCGc > 2:503371/1‑150 (MQ=255) ttCCAGCGCTGCTTGCGCAGCAGGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGc > 2:846579/1‑150 (MQ=255) cgcTGCTTGCGCAGCAGGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGa < 2:2029847/150‑1 (MQ=255) ctgctTGCGCAGCAGGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAAt < 1:914115/150‑1 (MQ=255) tgctTGCGCAGCAGGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATc < 2:3033851/150‑1 (MQ=255) ttGCGCAGCAGGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGa < 1:2988227/150‑1 (MQ=255) ttGCGCAGCAGGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGa > 2:2932840/1‑150 (MQ=255) ttGCGCAGCAGGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACCGGGAGACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGa < 1:1329613/150‑1 (MQ=255) ttGCGCAGCAGGTGGCAGAACAGGTCAGCCTCACCCGTTTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGa > 1:1492605/1‑150 (MQ=255) tGCGCAGCAGGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGAt > 1:1708470/1‑150 (MQ=255) gcagcaGGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCgg > 1:2614985/1‑150 (MQ=255) cagGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGAATGCGAATCTGATCGGAGaa < 2:2347645/150‑1 (MQ=255) agGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAg < 1:2209629/150‑1 (MQ=255) cAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGaaaa < 1:1272423/150‑1 (MQ=255) cAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGaaaa < 1:2094519/150‑1 (MQ=255) ggTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAAca < 1:1037905/150‑1 (MQ=255) gTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAAcag > 1:2868002/1‑150 (MQ=255) gCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACagcagc < 1:183086/150‑1 (MQ=255) gcgcTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTg < 2:2614985/150‑1 (MQ=255) gcTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATCATGGGGGGGTCATTCAGCGCCAGCTCCGCGAATATGCGTATCGCATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGgc > 1:688853/1‑150 (MQ=255) gcTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGcc > 1:438188/1‑101 (MQ=255) ttcttGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGa < 2:50897/131‑1 (MQ=255) ttcttGTCCACAGGCACCAGCCACTGCTTGAAGCTGGCGGTCGTTGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGAGAATCTGATCGGAGAAGGTGGCGGCAAACAGAAGCGTCTGgcgg > 2:913206/1‑149 (MQ=255) tcttGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTgg > 2:2830535/1‑126 (MQ=255) tcttGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTgg < 1:2830535/126‑1 (MQ=255) ttGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTg > 2:1127565/1‑150 (MQ=255) ttGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTg > 1:356511/1‑150 (MQ=255) tGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTgc < 2:2195621/150‑1 (MQ=255) cacaGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGTGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCtt < 1:1012685/144‑1 (MQ=255) cacaGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGTGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCtt > 2:1012660/1‑144 (MQ=255) cacaGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGTGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCtt < 1:1012660/144‑1 (MQ=255) cacaGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGTGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCgg > 2:2921126/1‑150 (MQ=255) cacaGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGTGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCgg > 2:2920983/1‑150 (MQ=255) cacaGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCgg > 2:176203/1‑150 (MQ=255) cacaGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCgg > 1:826681/1‑150 (MQ=255) acaGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAAcagcag < 2:1752326/131‑1 (MQ=255) acaGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGc > 1:2654493/1‑150 (MQ=255) caGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCa < 2:1181143/150‑1 (MQ=255) ggCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGc < 2:2633880/116‑1 (MQ=255) gCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTg < 1:845133/150‑1 (MQ=255) cAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCcgc < 1:2483223/150‑1 (MQ=255) aGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCcgcg < 1:292293/150‑1 (MQ=255) gCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGTGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCAGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGt < 1:2920983/150‑1 (MQ=255) gCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAAcag < 1:816250/118‑1 (MQ=255) gCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAAcag > 2:816250/1‑118 (MQ=255) ccACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTa > 1:1736139/1‑150 (MQ=255) cACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCACTGCcgcgcaa < 1:2932840/150‑4 (MQ=255) aCTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAAc < 1:1306164/113‑1 (MQ=255) aCTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAAc > 2:1306164/1‑113 (MQ=255) aCTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCcg < 1:198759/144‑1 (MQ=255) aCTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCcg > 2:198759/1‑144 (MQ=255) tGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGTGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACAcc > 2:1958898/1‑150 (MQ=255) tGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAAAATCGTCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACAcc > 1:162240/1‑150 (MQ=255) cTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTTATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGa < 1:1329087/150‑1 (MQ=255) cGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCa < 2:2220895/150‑1 (MQ=255) gcggcCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGctct < 1:503371/150‑1 (MQ=255) gcggcCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGctct > 1:499966/1‑150 (MQ=255) gcggcCGTGGCGTTGCGCGGGCTCACTTCGACACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACAACGACTGAAGctct < 2:1082388/150‑1 (MQ=255) gcCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCg < 1:2015898/150‑1 (MQ=255) cGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGc < 2:908876/150‑1 (MQ=255) gTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCa > 2:1004297/1‑150 (MQ=255) cGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGTAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGc > 1:1741565/1‑150 (MQ=255) gTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGcc > 2:2925449/1‑150 (MQ=255) ttGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGccc < 1:2510482/150‑1 (MQ=255) tGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCa < 1:176203/150‑1 (MQ=255) gcgcGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAg < 2:826681/150‑1 (MQ=255) gcgcGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAg < 2:410883/150‑1 (MQ=255) gcgGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGt > 2:262573/1‑150 (MQ=255) cagggCTCACTTCAATAGTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGt < 2:1708470/148‑1 (MQ=255) cgGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTc > 1:2451953/1‑150 (MQ=255) gCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAg > 2:1422870/1‑150 (MQ=255) aCTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACagcagc < 1:2881118/81‑1 (MQ=255) aCTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACagcagc > 2:2881118/1‑81 (MQ=255) aCTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATg > 1:2656750/1‑150 (MQ=255) aCTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATg < 1:262573/150‑1 (MQ=255) ttCGATACTGAGGGGGTCATTCAGCGCCAGCACCGACAACATCAGTATTAAATAGGATAAGGTGTCGGAAAACATCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCg > 1:1597678/1‑150 (MQ=255) aTACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCg < 2:1434403/150‑1 (MQ=255) tACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGctc > 2:1174970/1‑118 (MQ=255) tACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGctc < 1:1174970/118‑1 (MQ=255) tGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTg < 1:1109671/93‑1 (MQ=255) aGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCa < 2:2290279/88‑1 (MQ=255) aGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCa > 1:2290279/1‑88 (MQ=255) aGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCa < 1:86054/150‑1 (MQ=255) ggggTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCaaa < 1:664983/120‑1 (MQ=255) ggggTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATc < 2:2451953/150‑1 (MQ=255) ggTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCa > 1:946710/1‑150 (MQ=255) gTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAg > 1:878404/1‑150 (MQ=255) aTTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCAc > 2:1255344/1‑150 (MQ=255) ttCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCa < 2:1087637/100‑1 (MQ=255) ttCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCAcc > 1:2147247/1‑150 (MQ=255) ttCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCAcc > 2:2754730/1‑150 (MQ=255) tCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTacac < 1:3003484/91‑1 (MQ=255) aGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCcgcg > 1:1295553/1‑84 (MQ=255) aGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCcgcg < 2:1295553/84‑1 (MQ=255) gcgcCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAggg > 2:1848485/1‑150 (MQ=255) | AACACCAGCACCTGCTTCCAGCGCTGCTTGCGCAGCAGGTGGCAGAACAGGTCAGCCTTGCGCTTCTTGTCCACAGGCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGG > NC_002947/5427402‑5427699 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |