Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,440,059 T→C 5.9% D272G (GAC→GGC)  amn ← AMP nucleosidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,440,0590TC 5.9% 440.6 / 10.4 154D272G (GAC→GGC) amnAMP nucleosidase
Reads supporting (aligned to +/- strand):  ref base T (74/69);  new base C (5/4);  total (80/74)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.20e-01

Only 100 of 155 total aligned reads displayed.

CGTAGTCGCCGATGGTCTGCGACTGCCGCAGGCCGCCGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGAAGCGCGGGTCGTCACGCAG  >  NC_002947/5439910‑5440207
                                                                                                                                                     |                                                                                                                                                     
cGTAGTCGCCGATGGTCTGCGACTGCCGCAGGCCGCCGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCAACCCAATGTTCACCAAGGTAACGCCATCGCCGt                                                                                                                                                       <  1:849081/150‑1 (MQ=255)
     tCGCCGATGGTCTGCGACTGCCGCAGCACACCGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTcggcg                                                                                                                                                  >  1:81212/1‑150 (MQ=255)
      cGCCGATGGTCTGCGACTGCCGCAGGCCGCCGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTcggcgg                                                                                                                                                 >  1:515427/1‑150 (MQ=255)
      cGCCGATGGTCTGCGACTGCCGCAGGCCGCCGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTcggcgg                                                                                                                                                 <  1:1583169/150‑1 (MQ=255)
        ccGATGGTCTGCGACTGCCGCAGGCCGCCGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGgcggcg                                                                                                                                               >  1:2857515/1‑150 (MQ=255)
              gTCTGCGACTGCCGCAGGCCGCCGCAGTGACCGAGCATCAGCCAGCAATGCGGGCGCAGCACGGGCAGGTGGTCGGTGATGTTATTGGCGTTGGATGGGTCCACACCAATGTTGACCAAGGTACCGCCATCGCCGTCGGCGGCGATCAgg                                                                                                                                        <  1:2716006/150‑1 (MQ=255)
                 tGCGACTGCCGCAGGCCGCCGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAggtgg                                                                                                                                     >  1:1514315/1‑150 (MQ=255)
                  gCGACTGCCGCAGGCCGCCGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAGTGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAggtggt                                                                                                                                    <  2:1231380/150‑1 (MQ=255)
                       tGCCGCAGGCCGCCGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGCTGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGcc                                                                                                                               >  1:1283828/1‑150 (MQ=255)
                       tGCCGCAGGCCGCCGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGcc                                                                                                                               <  2:430629/150‑1 (MQ=255)
                         ccGCAGGCCGCCGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCgg                                                                                                                             >  1:1090479/1‑150 (MQ=255)
                         ccGCAGGCCGCCGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGACCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCgg                                                                                                                             >  1:1615608/1‑150 (MQ=255)
                          cGCAGGCCGCCGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGCCGACGGCGAtg                                                                                                                                            >  2:1863854/1‑134 (MQ=255)
                          cGCAGGCCGCCGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGCCGACGGCGAtg                                                                                                                                            <  1:1863854/135‑2 (MQ=255)
                             aGGCCGCCGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATc                                                                                                                         <  2:1137033/150‑1 (MQ=255)
                               gccgccGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGTGGCGATCAGGTGGTAGGCCGGCATCTg                                                                                                                       <  1:2138662/150‑1 (MQ=255)
                               gccgccGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTg                                                                                                                       >  2:2920833/1‑150 (MQ=255)
                               gccgccGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTg                                                                                                                       <  2:2857515/150‑1 (MQ=255)
                                       aGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGt                                                                                                               >  1:743200/1‑150 (MQ=255)
                                       aGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTAGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGt                                                                                                               <  2:8359/150‑1 (MQ=255)
                                         tGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGc                                                                                                             <  2:1434915/150‑1 (MQ=255)
                                           aCCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCa                                                                                                           >  2:18331/1‑150 (MQ=255)
                                              gATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGAc                                                                                                        >  2:2880583/1‑150 (MQ=255)
                                                   tcaGCCAGCAATGCGGGCGCAGCACGGCCAGGTTGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTa                                                                                                                    >  2:1377792/1‑133 (MQ=255)
                                                   tcaGCCAGCAATGCGGGCGCAGCACGGCCAGGTTGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTa                                                                                                                    <  1:1377792/133‑1 (MQ=255)
                                                   tcaGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGc                                                                                                   >  1:451564/1‑150 (MQ=255)
                                                    cagccagcAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCt                                                                                                  <  1:2880583/150‑1 (MQ=255)
                                                       ccagcAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTg                                                                                                                       >  2:241050/1‑126 (MQ=255)
                                                       ccagcAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTg                                                                                                                       <  1:241050/126‑1 (MQ=255)
                                                         agcAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGcca                                                                                             >  1:23116/1‑150 (MQ=255)
                                                          gcAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTTACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGccac                                                                                            <  2:345227/150‑1 (MQ=255)
                                                           cAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGc                                                                                               <  1:243770/146‑1 (MQ=255)
                                                            aaTGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGccacca                                                                                          <  1:108755/150‑1 (MQ=255)
                                                                 gggCGAAGCACAGGTAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGcc                                                                                     <  2:1615608/150‑1 (MQ=255)
                                                                    cgcAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTgg                                                                                  <  1:2754670/150‑1 (MQ=255)
                                                                     gcagcaCGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCAGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGc                                                                                                             >  2:2765320/1‑122 (MQ=255)
                                                                     gcagcaCGGCCAGGTGGTCGGCGATGAACTTGGAGCTACATGACCCGACATCAATGTGGTCCAAAGAGACTCGATCGCCTTCGGCGGCGATCAGGGGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTggg                                                                                 >  2:2652566/1‑150 (MQ=255)
                                                                        gcaCGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGttt                                                                              >  2:955267/1‑150 (MQ=255)
                                                                        gcaCGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGttt                                                                              >  1:1251130/1‑150 (MQ=255)
                                                                          aCGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAgg                                                                                        <  2:1078600/138‑1 (MQ=255)
                                                                          aCGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCg                                                                            >  1:1319916/1‑150 (MQ=255)
                                                                             gCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCa                                                                         <  1:1095836/150‑1 (MQ=255)
                                                                                aGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATgg                                                                      <  2:743200/150‑1 (MQ=255)
                                                                                     gtCGGTGATGTTCTTGGCGTTGGTTGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAggtg                                                                                                                                      >  1:544634/1‑81 (MQ=255)
                                                                                     gtCGGTGATGTTCTTGGCGTTGGTTGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAggtg                                                                                                                                      <  2:544634/81‑1 (MQ=255)
                                                                                        ggTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCgg                                                                                                                >  2:1758393/1‑100 (MQ=255)
                                                                                        ggTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCgg                                                                                                                <  1:1758393/100‑1 (MQ=255)
                                                                                        ggTGATGTTCTTGGCGTTGGATGGGCACACACCAATGTTGGCCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGcc                                                              >  2:38716/1‑150 (MQ=255)
                                                                                         gTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTg                                                                                                 >  2:2953234/1‑114 (MQ=255)
                                                                                         gTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTg                                                                                                 <  1:2953234/114‑1 (MQ=255)
                                                                                              gTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTc                                                        >  2:1509151/1‑150 (MQ=255)
                                                                                                 catctcGTTGGCTGGCCCCACACCAATGTTGACCAAGGTAACGCCATCCATCTCTCAGTTGAACAACATCGCCGGGCTCATCTAGTACCGAGGCCAGACCACGCTGGCCACCAGGGCCCTTGTTTCGCCATGGTCCATGCCCTTTTCGAt                                                     <  1:1466717/145‑1 (MQ=255)
                                                                                                 cTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGAt                                                     <  2:507822/150‑1 (MQ=255)
                                                                                                  ttGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATc                                                    >  2:1119467/1‑150 (MQ=255)
                                                                                                   tGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCa                                                   <  1:2808680/150‑1 (MQ=255)
                                                                                                     gCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGGCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCt                                                                                    >  2:1026285/1‑115 (MQ=255)
                                                                                                     gCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCt                                                                                    <  1:1026285/115‑1 (MQ=255)
                                                                                                     gCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCacg                                                 <  1:1063503/150‑1 (MQ=255)
                                                                                                       gTTGGATGGGCCCACACCAATGTTGACCAGGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGCTCagatc                                               >  2:1466717/1‑146 (MQ=255)
                                                                                                       gTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCTATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTTGCCATGGTCCATGCCCTTTTCGa                                                      <  2:109461/143‑1 (MQ=255)
                                                                                                            aTGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATg                                                                       <  2:1495995/121‑1 (MQ=255)
                                                                                                               ggCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCg                                       >  2:1790783/1‑150 (MQ=255)
                                                                                                               ggCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCg                                       <  2:2088380/150‑1 (MQ=255)
                                                                                                                 cccACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGgc                                     >  2:1677083/1‑150 (MQ=255)
                                                                                                                  ccACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGc                                                                                                             >  2:153792/1‑77 (MQ=255)
                                                                                                                  ccACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGc                                                                                                             <  1:153792/77‑1 (MQ=255)
                                                                                                                   cacaCCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGtt                                            <  1:2071880/141‑1 (MQ=255)
                                                                                                                   cacaCCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGtt                                            >  2:2071880/1‑141 (MQ=255)
                                                                                                                   cacaCCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGgcag                                   >  2:1575256/1‑150 (MQ=255)
                                                                                                                    acacCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTc                                                                             <  1:1119512/107‑1 (MQ=255)
                                                                                                                       ccAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCAcc                               <  1:716450/150‑1 (MQ=255)
                                                                                                                        cAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCa                              >  1:786398/1‑150 (MQ=255)
                                                                                                                        cAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCa                              >  2:2618194/1‑150 (MQ=255)
                                                                                                                              tGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCCGTCCACCTCGCCGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCAtacgta                        <  1:968907/150‑1 (MQ=255)
                                                                                                                               gACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGc                                                                                                             >  1:2641627/1‑64 (MQ=255)
                                                                                                                               gACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGc                                                                                                             <  2:2641627/64‑1 (MQ=255)
                                                                                                                                 ccAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTg                                                                                   <  2:2312702/88‑1 (MQ=255)
                                                                                                                                 ccAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTg                                                                                   >  1:2312702/1‑88 (MQ=255)
                                                                                                                                 ccAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATc                                                    <  1:1672222/119‑1 (MQ=255)
                                                                                                                                 ccAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATc                                                    >  2:1672222/1‑119 (MQ=255)
                                                                                                                                  cAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCCCGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTCTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGaa                    >  2:542974/1‑150 (MQ=255)
                                                                                                                                  cAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGTGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGaa                    >  2:1126146/1‑150 (MQ=255)
                                                                                                                                  cAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCttt                                                          <  1:2685497/112‑1 (MQ=255)
                                                                                                                                  cAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCttt                                                          >  2:2685497/1‑112 (MQ=255)
                                                                                                                                  cAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGaa                    >  2:1605825/1‑150 (MQ=255)
                                                                                                                                   aaGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGAAg                   >  2:1946970/1‑150 (MQ=255)
                                                                                                                                      gTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGAAgcgc                <  2:23116/150‑1 (MQ=255)
                                                                                                                                      ctaccGCCATCACCGTGGGCGGCGCTCAGGTCGTAGTCCGCCATATGGTACCGGTCCGAGACGCCACTGGCCTCCAGTGCCTGGGTTTCGCCTTGGTCCATTCCCGTTTCGAGCACGACGTTGCCCGGCAGCACCATACGTACGACgcgc                <  2:1283828/146‑1 (MQ=255)
                                                                                                                                       tAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGAAGcgcg               <  1:1509151/150‑1 (MQ=255)
                                                                                                                                        cacctgaTCGCCGCCGACGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGAAGCGCgg              >  2:1555334/7‑150 (MQ=255)
                                                                                                                                        aaCGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGAAGCGCgg              >  2:2865486/1‑150 (MQ=255)
                                                                                                                                        aaCGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGAAGCGCgg              <  1:2618194/150‑1 (MQ=255)
                                                                                                                                        aaCGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGAAGCGCgg              <  1:38716/150‑1 (MQ=255)
                                                                                                                                           gCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGAAGCGCGGgtc           <  1:460912/150‑1 (MQ=255)
                                                                                                                                           ctgaTCGCCGCCGACGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGAAGCGCgg              >  2:1610090/4‑147 (MQ=255)
                                                                                                                                           ctgaTCGCCGCCGACGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGAAGCGCgg              <  1:1610090/144‑1 (MQ=255)
                                                                                                                                            ccATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGAAGCGCGGgtcg          >  2:47965/1‑150 (MQ=255)
                                                                                                                                             cATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGAAGCGCGGgtcgt         >  1:831252/1‑150 (MQ=255)
                                                                                                                                              aTCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGAAGCGCGGgtcgtc        <  1:1856705/150‑1 (MQ=255)
                                                                                                                                              aTCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGAAGCGCGGgtcgtc        <  1:18331/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CGTAGTCGCCGATGGTCTGCGACTGCCGCAGGCCGCCGCAGTGACCGATCATCAGCCAGCAATGCGGGCGCAGCACGGCCAGGTGGTCGGTGATGTTCTTGGCGTTGGATGGGCCCACACCAATGTTGACCAAGGTAACGCCATCGCCGTCGGCGGCGATCAGGTGGTAGGCCGGCATCTGGTAGCGGTGCCAGACCACGCTGGCCACCAGGGCCTGGGTTTCGCCATGGTCCATGCCCTTTTCGATCACGACGTTGCCCGGCAGCACCATACGTACGAAGCGCGGGTCGTCACGCAG  >  NC_002947/5439910‑5440207

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: