| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,685,958 | G→C | 7.3% | P331A (CCC→GCC) ‡ | PP_4988 ← | signal transduction histidine kinase CheA/CheY‑like receiver |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,685,958 | 0 | G | C | 7.3% | 412.1 / 17.6 | 133 | P331A (CCC→GCC) ‡ | PP_4988 | signal transduction histidine kinase CheA/CheY‑like receiver |
| Reads supporting (aligned to +/- strand): ref base G (57/66); new base C (6/4); total (63/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 138 total aligned reads displayed.
GTGCGTCAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCT > NC_002947/5685809‑5686104 | gTGCGTCAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAggg < 2:2704564/150‑1 (MQ=255) tCAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCa < 2:445528/150‑1 (MQ=255) cAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAg > 2:818694/1‑150 (MQ=255) gCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACATCTCGGCCACGGCCGGCAGCATCAACATGGCCAATTCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGc < 2:1722252/150‑1 (MQ=255) gCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCGTTAACATGGGCCATGCCCCGCTTATCGGCGGCAACAGCCCCGGGAAGGGCTggcggg > 2:2337905/1‑145 (MQ=255) atcaATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTg > 1:493293/1‑150 (MQ=255) atcaATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAACGGGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTg > 1:216687/1‑150 (MQ=255) tcaATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAACGCCTGCAgcccttgc < 1:1255037/150‑8 (MQ=255) aTCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAACGCCTGCAGCCCTTGCCgg < 2:2195846/150‑1 (MQ=255) cggcggCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCgggg < 1:67400/150‑1 (MQ=255) cggcggCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCgggg < 1:2611087/150‑1 (MQ=255) cggcggCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCgggg < 2:3053774/150‑1 (MQ=255) ggcggcTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGc < 1:818694/150‑1 (MQ=255) ggcggcTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAACGCCTGCAGCCCTTGc < 2:2793784/144‑1 (MQ=255) gcggcTCTTCCTCCAGGTGCTGCAACCAAAGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGcc > 1:592536/1‑150 (MQ=255) ctctTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTc < 1:2948662/150‑1 (MQ=255) tctTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCg > 1:1678746/1‑150 (MQ=255) tctTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCg < 1:718439/150‑1 (MQ=255) ttCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGa > 1:340775/1‑150 (MQ=255) ttCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGa < 1:988081/150‑1 (MQ=255) tcctccAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑c > 2:2225309/1‑150 (MQ=255) ctccAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTc < 1:1510845/150‑1 (MQ=255) tccAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑Ctgc > 2:1174824/1‑148 (MQ=255) tccAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTcc < 2:1084359/150‑1 (MQ=255) cAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAg < 1:331133/150‑1 (MQ=255) cAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAg > 1:1678024/1‑150 (MQ=255) aGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAgg < 1:250976/150‑1 (MQ=255) aGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAgg < 2:2280097/150‑1 (MQ=255) ctgcAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGc > 1:2162820/1‑119 (MQ=255) ctgcAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGc < 2:2162820/119‑1 (MQ=255) ctgcAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATc < 2:2370910/150‑1 (MQ=255) ctgcAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATc > 1:2169450/1‑150 (MQ=255) tgcAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAACGCCTGCAGCCCTTGCCGGGGct > 2:616767/1‑129 (MQ=39) accaacGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGa < 2:340775/150‑1 (MQ=255) ccaacGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGAt > 1:2531572/1‑150 (MQ=255) caacGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATc > 1:2403848/1‑150 (MQ=255) caacGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGCAGACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATc < 1:2337905/150‑1 (MQ=255) aacGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCa < 1:1383391/150‑1 (MQ=255) tGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGc < 2:202496/99‑1 (MQ=255) tGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGc > 1:202496/1‑99 (MQ=255) acaTAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAg < 2:1238672/128‑1 (MQ=255) aTAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGc > 2:3017936/1‑150 (MQ=255) tGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCctgctg < 2:934053/150‑1 (MQ=255) aGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAaca < 2:2198331/150‑1 (MQ=255) gACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGtt < 2:560069/150‑1 (MQ=255) aCAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTc < 1:1154908/150‑1 (MQ=255) cAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCa > 2:414792/1‑150 (MQ=255) aaaCAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAg > 2:322302/1‑150 (MQ=255) aaaCAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAg > 1:1128342/1‑150 (MQ=255) aaCAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGc > 1:2812304/1‑150 (MQ=255) aGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCgggg < 2:1150347/89‑1 (MQ=255) aGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCgggg > 1:1150347/1‑89 (MQ=255) aGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGc > 1:2842721/1‑147 (MQ=255) aGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGat > 1:552384/1‑150 (MQ=255) cGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGattcat < 2:216687/150‑1 (MQ=255) gCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCa < 2:2814899/139‑1 (MQ=255) gCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCa > 1:2814899/1‑139 (MQ=255) gCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGattcattc > 2:2866408/1‑150 (MQ=255) gCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGattcattc < 2:1974301/150‑1 (MQ=255) gaccgccggcAGCATCAACGTGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAg < 2:493293/146‑1 (MQ=255) aCGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAggg > 1:878834/1‑62 (MQ=255) aCGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAggg < 2:878834/62‑1 (MQ=255) cggccggcAGCATCAACATGGCCAATTCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAg > 1:2622908/1‑94 (MQ=255) cggccggcAGCATCAACATGGCCAATTCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAg < 2:2622908/94‑1 (MQ=255) ccggcAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCa < 1:1087520/150‑1 (MQ=255) cATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGc > 2:768107/1‑64 (MQ=255) ggCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTaa < 2:1463064/79‑1 (MQ=255) ggCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTaa > 1:1463064/1‑79 (MQ=255) aaTGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGAt > 1:1963622/1‑83 (MQ=255) aaTGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAgg < 1:843193/150‑1 (MQ=255) gCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTcc < 2:2531572/150‑1 (MQ=255) ccccGCGCATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGCCACC‑GGGCTGGGGGCAGGTGGAATGTAGCTGCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCg < 1:361851/150‑1 (MQ=255) cccGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGTCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGGTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGa > 1:1616492/1‑150 (MQ=255) cccGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCctgctg < 1:3025667/96‑1 (MQ=255) cccGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCctgctg > 2:3025667/1‑96 (MQ=255) cgcgGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTc > 1:447403/1‑145 (MQ=255) tCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCTGGGCCAGTCGTA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACCTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCa < 1:1174824/150‑1 (MQ=255) gctgcAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCg > 1:1261467/1‑144 (MQ=255) gctgcAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCg < 2:1261467/144‑1 (MQ=255) gctgcAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGc > 2:1183797/1‑150 (MQ=255) tgcAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTg > 1:679771/1‑150 (MQ=255) cAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGcc > 2:2855074/1‑150 (MQ=255) aaCAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCt < 2:2812304/150‑1 (MQ=255) aaCAGCCACGGCAAGGCCTACAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCt > 2:2492334/1‑150 (MQ=255) cAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGattcatt < 1:395534/99‑1 (MQ=255) cAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGattcatt > 2:395534/1‑99 (MQ=255) cAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCCTg < 1:3063576/150‑1 (MQ=255) gCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGc < 2:1678746/150‑1 (MQ=255) gCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTAATTCAGCAACAGCTCGCGTATCTCGTCGATGTCCGAGCCCGGCAGGCTGCCTTgag > 2:2038558/1‑148 (MQ=255) ccccGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGcc < 2:2901604/70‑1 (MQ=255) ccccGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGcc > 1:2901604/1‑70 (MQ=255) ccccGGCAACGCCTGCAGCCCTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGACAGGTCGGAACCCGGCAGGCTGCCTTGGcc > 1:159771/1‑150 (MQ=255) ccccGGCAACGCCTGCAGCCCTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGAACCAGCTGGCGTATCTCGGCCAGGGCCGAGCCCGGCAAGCCGcagtgccc > 1:2867223/1‑143 (MQ=255) cccGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCg > 1:1806926/1‑150 (MQ=255) cccGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCg > 1:1380835/1‑150 (MQ=255) cccGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CACCAGGTAATCGCCGATCAGAACCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCAGGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCg > 1:1013333/1‑150 (MQ=255) ccGGCGACGCCTGCAGCCCTTGCCGGGGCTAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGt > 2:767345/1‑150 (MQ=255) ccGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTAGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGt > 1:2320788/1‑150 (MQ=255) cAAGTGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGAGCAGATCCTTGGCCTGTTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTtc < 2:592536/150‑1 (MQ=255) aGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTtcct < 2:509932/150‑1 (MQ=255) | GTGCGTCAGCTCATCAATCGGCGGCTCTTCCTCCAGGTGCTGCAACCAACGCTGCACATAGCTTGCGCAGCCGACAAACAGCTCGGCCACGGCCGGCAGCATCAACATGGCCAATGCCCCGCGGATCTGCTGCAACAGCCCCGGCAAGGGCTGCAGGCGTTGCCGGGGCCAGTCGGA‑CTCCAGGTAATCGCCGATCAGATCCTTGGCCTGCTGCAACACGTTCAGCGATTCATTCAGCACCAGCTGGCGTATCTCGGCCAGGTCCGAGCCCGGCAGGCTGCCTTGGCCGTTTTCCT > NC_002947/5685809‑5686104 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |