| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,740,530 | C→A | 11.4% | intergenic (+39/+32) | hutF → / ← PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,740,530 | 0 | C | A | 11.4% | 195.6 / 11.2 | 70 | intergenic (+39/+32) | hutF/PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Reads supporting (aligned to +/- strand): ref base C (29/33); new base A (2/6); total (31/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.35e-01 | |||||||||||
GATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAGTGTCGGT > NC_002947/5740387‑5740679 | gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGaa < 2:1480521/150‑1 (MQ=255)gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGaa < 1:179588/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CCGCCCTTCGCGTGCAAGCCCGTGAAg < 2:2493111/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAg < 1:2813918/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAACCCTTCGCGGGCTTGCACGCGAAg < 2:1509801/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAACCCTTCGCGGGCTTGCACGCGAAg < 2:2876804/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAACCCTTCGCGGGCTTGCACGCGAAg < 2:304628/150‑1 (MQ=39) tgtgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCATGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAACCCTTCGCGGGCTTGCACGCGAAgg < 2:2064245/150‑1 (MQ=38) gtgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAggg < 1:2331678/150‑1 (MQ=255) tgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGt < 1:1929157/150‑1 (MQ=255) gagggTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTC‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGtt < 2:738763/147‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACTGGGGTTGCGTTG‑CAACCCTTCGCGGGCTTGCACGCGAAgggct < 2:1212272/150‑3 (MQ=38) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGtt < 2:2324495/150‑1 (MQ=255) tGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTgc < 1:1526733/150‑1 (MQ=255) gTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTCCCCCAGTGTTGCTTCAGCTTTTTGGTTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTgcaa < 1:1909289/150‑1 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTgcaac < 1:1298111/150‑1 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGACGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTgcaac < 2:2863614/150‑1 (MQ=255) ggggCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAACAGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTgcaacgcaa < 1:2202213/149‑1 (MQ=255) gggCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTgcaacgc < 2:2377452/147‑1 (MQ=255) gggCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTgcaacgc > 1:2377452/1‑147 (MQ=255) gCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAg > 2:2885976/1‑134 (MQ=255) gCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAg < 1:2885976/134‑1 (MQ=255) gCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCACGCATTTGGGCTGAGCGTACCGAGGCCACGCTC‑TACCCCTTCGCTTGCAAGCCCGCGAAGGGTTGCAACGCAAccc > 1:1454125/1‑150 (MQ=255) gtgCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTg > 1:3417/1‑129 (MQ=255) gtgCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTg < 2:3417/129‑1 (MQ=255) tgCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCa < 1:2457003/150‑1 (MQ=255) ccAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGATGCGTTG‑GAGCCCTGCGCGTGCAAGCCCGCGGAGGGGTGCAACGCAACCCCAAAAAACTCAGTGc > 2:180403/1‑150 (MQ=255) gcATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTCCGCCCGCCTTTCGGCCGCGCGAACAGGTGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACt < 1:2360706/150‑1 (MQ=255) aTGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAAAACAAGTCATTTTTACTAt > 2:1329892/1‑150 (MQ=255) tGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAgg > 1:856660/1‑108 (MQ=255) tGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAgg < 2:856660/108‑1 (MQ=255) cccAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTg < 1:1809069/150‑1 (MQ=255) cccAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCACCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAg > 1:1405152/1‑105 (MQ=255) cccAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCACCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAg < 2:1405152/105‑1 (MQ=255) ccAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGGGCTTGCACGCGAAggg > 2:2241320/1‑106 (MQ=37) ccAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGGGCTTGCACGCGAAggg < 1:2241320/106‑1 (MQ=37) gAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTgcaa > 2:2082343/1‑108 (MQ=255) gAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTgcaa < 1:2082343/108‑1 (MQ=255) aTGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGa < 1:2152348/150‑1 (MQ=255) gggcgggcGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTgcaac < 2:549194/97‑1 (MQ=255) gggcgggcGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTgcaac > 1:549194/1‑97 (MQ=255) ccAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGATGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCt > 1:2220228/1‑150 (MQ=255) cAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAGCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTg > 2:358335/1‑150 (MQ=255) aGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGACAAGCGTT‑TCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGgt < 1:1723755/150‑1 (MQ=255) ccAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATAccc > 2:980566/1‑149 (MQ=255) ccAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATAccc < 1:980566/149‑1 (MQ=255) aGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCctg > 1:2272273/1‑150 (MQ=255) ttgtGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCctgctg > 1:3066832/4‑150 (MQ=255) tGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGccc > 2:2031927/1‑150 (MQ=255) cGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGa < 2:629541/150‑1 (MQ=255) cGTACCGGGGTTGCGTTG‑CAGCACTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGa < 2:2603372/150‑1 (MQ=255) tACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGACCGATCTGCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAca < 1:1329892/150‑1 (MQ=255) ccGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagc > 2:2271993/1‑150 (MQ=255) ccGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagc < 2:2272273/150‑1 (MQ=255) cGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagca < 2:3066832/150‑1 (MQ=255) ttg‑cAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTCGACAGCAGGTTCTCACg > 1:784022/1‑150 (MQ=255) aacccTTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc > 1:1415538/3‑150 (MQ=38) gCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTccc > 2:2514583/1‑150 (MQ=255) cccTTCGCGTGCAAGCCCGCGAAGGGATGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCa > 2:63770/1‑150 (MQ=255) ccTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAg > 1:1004541/1‑150 (MQ=255) ccTTCGCGTGCAAGCCCGCGAAGGGATGCAACGCAACCCCAAACAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCACCAGATCAAGCGGCTGGTGTCATACCCCAGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAg > 2:1365377/1‑150 (MQ=255) cTTCGCGTGCAAGCCCGCGAAGGGGTCCAACGCAACCCCAAAACACTCAGTGCACTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:237828/1‑150 (MQ=255) gTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCa > 1:1803373/1‑150 (MQ=255) caggCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAgtg > 1:3072026/4‑150 (MQ=255) cAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTAACGCTCACAGGCCGGCAgtg > 2:2022535/1‑150 (MQ=255) aaGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAc < 1:2997088/67‑1 (MQ=255) aaGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAc > 2:2997088/1‑67 (MQ=255) aGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAGTGTc > 1:1390690/1‑150 (MQ=255) gCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCt > 2:1222716/1‑112 (MQ=255) gCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCt < 1:1222716/112‑1 (MQ=255) ccGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCa < 1:380401/134‑1 (MQ=255) ccGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCa > 2:380401/1‑134 (MQ=255) ccGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAGTGTCg < 2:126681/148‑1 (MQ=255) ccGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAGTGTCg > 1:126681/1‑148 (MQ=255) ccGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAGTGTCGgt > 1:2857402/1‑150 (MQ=255) ccGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAGTGTCGgt < 2:2220228/150‑1 (MQ=255) | GATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTG‑CAGCCCTTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAGTGTCGGT > NC_002947/5740387‑5740679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |