Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,743,446 G→A 15.1% intergenic (‑223/+24) fbp ← / ← glgP class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,743,4460GA15.1% 323.8 / 41.6 138intergenic (‑223/+24)fbp/glgPclass 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
Reads supporting (aligned to +/- strand):  ref base G (63/54);  new base A (11/10);  total (74/64)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 148 total aligned reads displayed.

TGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATC  >  NC_002947/5743297‑5743595
                                                                                                                                                       |                                                                                                                                                     
tgaGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCgg                                                                                                                                                       <  1:2784692/150‑1 (MQ=255)
        gCCACGGCTCTCAGACGGCACAATCGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTgccc                                                                                                                                               <  1:1387240‑M2/150‑5 (MQ=255)
        gCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTgccc                                                                                                                                               >  2:2517917‑M2/1‑146 (MQ=255)
          cACGGCTCTCAGACGGCGCAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAATCTTGCGAGACACCTGTGGGAGCGGGCGTgcccgc                                                                                                                                             <  2:1574421‑M2/150‑7 (MQ=255)
              gCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGTCCGCGAAc                                                                                                                                         >  1:398230/1‑150 (MQ=255)
                 ctcAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGAAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGc                                                                                                                                      <  1:2455991/150‑1 (MQ=255)
                     gACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGcctca                                                                                                                                  >  1:886634/1‑150 (MQ=255)
                      aCGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGcctcac                                                                                                                                 >  1:1757508/1‑150 (MQ=255)
                           acaATGGGTGGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCaa                                                                                                                            >  2:2294155/1‑150 (MQ=255)
                           acaATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCgg                                                                                                                                                       >  2:527973/1‑123 (MQ=255)
                                 ggTCGGTAGTTCCGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGGGTGCGCGCGCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAAt                                                                                                                      <  1:2970957/150‑1 (MQ=255)
                                  gTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATg                                                                                                                     >  1:2555066/1‑150 (MQ=255)
                                            cAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAATCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGAt                                                                                                           <  2:2142093/150‑1 (MQ=255)
                                             aGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAAt                                                                                                                      >  2:2526666/1‑138 (MQ=255)
                                              gCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGAtct                                                                                                         >  2:1527275/1‑150 (MQ=255)
                                                cTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTgcccgcgaatggac                                                                                                                                     >  2:2977246‑M2/1‑106 (MQ=255)
                                                cTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTgcccgcgaatggac                                                                                                                                     <  1:2977246‑M2/120‑15 (MQ=255)
                                                cTTCGCCAGGCAGGGGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCg                                                                                                       <  2:475962/150‑1 (MQ=255)
                                                    gCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAAc                                                                                                                                         <  1:790591/112‑1 (MQ=255)
                                                    gCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAAc                                                                                                                                         >  2:790591/1‑112 (MQ=255)
                                                     ccAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGc                                                                                                  >  1:1031908/1‑150 (MQ=255)
                                                              tggtCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCCTGCTCCGAAATACCGGTCGCTAGCTACCTTACCTGAATCCAATTCCTTCCAGATCTCGGTGGCATATTcgcg                                                                                         >  1:1594402/1‑150 (MQ=255)
                                                                ttggattgaggtgaggccgttcgcgggcacgcccgctcccacaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgg                                                                                                                                                       <  1:1883249‑M2/1‑1 (MQ=255)
                                                                ttggattgaggtgaggccgttcgcgggcacgcccgctcccacaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgg                                                                                                                                                       >  2:1883249‑M2/88‑88 (MQ=255)
                                                                gtCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGAtct                                                                                                         <  1:1742672/132‑1 (MQ=255)
                                                                gtCGGGTTGTGTGTCCATTCGCGGCCGCGCTCCCTCCCACAGGTACAGCGCAAGCCTTGAACCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGaa                                                                                       <  2:1387240/150‑1 (MQ=255)
                                                                     gTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTg                                                                                  <  1:1488175/150‑1 (MQ=255)
                                                                     gTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTg                                                                                  <  2:1757508/150‑1 (MQ=255)
                                                                     gTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTg                                                                                  >  1:2479059/1‑150 (MQ=255)
                                                                     gTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTg                                                                                  >  2:1432876/1‑150 (MQ=255)
                                                                     gTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTAACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTg                                                                                  >  1:2688795/1‑150 (MQ=255)
                                                                     gTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGAGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTg                                                                                  >  2:1901665/1‑150 (MQ=255)
                                                                      cagtctgtCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAAAGGCCTAACCTCAAGCCAATGCCTTCCAGGTCTCGTTGGCATTGTCGCGAATGGTGc                                                                                 >  1:2410746/6‑150 (MQ=37)
                                                                       tgtgtgTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCg                                                                                <  1:2294155/150‑1 (MQ=255)
                                                                        aggtgaggccgttcgcgggcacgcccgctcccacaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgAGTGCGCCCGCGAATGGACACACCTCAATCCAATGCCTTCCAGATCTCgg                                                                                                      >  2:2545282‑M2/80‑129 (MQ=255)
                                                                        aggtgaggccgttcgcgggcacgcccgctcccacaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgAGTGCGCCCGCGAATGGACACACCTCAATCCAATGCCTTCCAGATCTCgg                                                                                                      <  1:2545282‑M2/50‑1 (MQ=255)
                                                                                aTTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTgccaagatagggacacacaaccagaccaccggcctggcgaaggctgaactaccgacctattgtgccgtctgagagc                                                                       <  1:2204837‑M2/150‑77 (MQ=255)
                                                                                aTTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGGGGCATATTCGCGAATGGTGCGGTCcgacga                                                                       >  2:1308197/1‑150 (MQ=255)
                                                                                    gcgGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAAc                                                                   <  1:2226147/150‑1 (MQ=255)
                                                                                        gcgcgcTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCacc                                                               >  2:775946/1‑148 (MQ=255)
                                                                                        gcgcgcTCGCCCCCACAGGTACAGCGCAAGCCTGAAAGCAAGCTAGACACCTGTGGGCTCGGGCGTGCTCGCGAACGGCCTCACCTCAATCCAATGCTTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGc                                                               <  1:1105970/150‑1 (MQ=255)
                                                                                          gcggggGCTCCCACAGGCACAGCGCAAGTGTTGTAGCTTGCGGGACACTTGTGGGCGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGccc                                                             >  2:686294‑M1/7‑150 (MQ=255)
                                                                                            gctcgctcCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGcctcac                                                                                                                                 <  2:1732422/80‑1 (MQ=255)
                                                                                            gctcgctcCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCAt                                                           >  1:986262/1‑150 (MQ=255)
                                                                                             ctcgctcCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTgcccgcgaacggacacacaaccagaccaccggcctggcgaaggctgaactaccgacctattgtgcc                                                                                 >  2:176055‑M2/1‑61 (MQ=255)
                                                                                              tcgctcCCACAGGTACAGCGCACGCGTTGAAGCTTTCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATcc                                                         <  2:2688795/150‑1 (MQ=255)
                                                                                              tcgctcCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATGCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATcc                                                         >  1:1697161/1‑150 (MQ=255)
                                                                                              cCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCaa                                                                                                                       >  2:1883249‑M1/2‑88 (MQ=255)
                                                                                              cCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCaa                                                                                                                       <  1:1883249‑M1/87‑1 (MQ=255)
                                                                                               cccgctcccacaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAAt                                                                                                                           <  2:2854660‑M2/29‑1 (MQ=255)
                                                                                               cccgctcccacaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAAt                                                                                                                           >  1:2854660‑M2/57‑85 (MQ=255)
                                                                                                  tcCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGAGCGCgcccgcgaatggacacacaaccagaccaccggcctggcgaaggctgaactaccgacctattgtgccgtctgagagccgtggcgagtctcatcac                                                     <  1:2538813‑M2/150‑95 (MQ=255)
                                                                                                  TCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATccgtgc                                                     <  1:589329‑M1/150‑1 (MQ=255)
                                                                                                    tcccacaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgAGCGCGCCCGCGAATGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGc                                                                                                  >  1:1663821‑M2/52‑105 (MQ=255)
                                                                                                    tcccacaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgAGCGCGCCCGCGAATGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGc                                                                                                  <  2:1663821‑M2/54‑1 (MQ=255)
                                                                                                    ccACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTgcccgcgaacggcctcacaaccagaccaccggcctggcgaaggctgaactaccgacctattgtgccgtctgagagccgtggcgagtctcatcactc                                                   <  1:2694446‑M2/150‑97 (MQ=255)
                                                                                                    CCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATccgtgccg                                                   <  1:2106932‑M1/150‑1 (MQ=255)
                                                                                                    CCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGAGCGCGCCCGCGAATGGcctcac                                                                                                                                 <  2:2780454‑M1/72‑1 (MQ=255)
                                                                                                    CCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGAGCGCGCCCGCGAATGGcctcac                                                                                                                                 >  1:2780454‑M1/1‑72 (MQ=255)
                                                                                                     CACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGATCGGCCTCACCTCAATCCAATACCTTCCAGATCTCGGTGGCATATTCGCGCATGGTGCGGTCCGGCGAGAACCAGCCCATccgtgccgt                                                  <  1:549189‑M1/150‑1 (MQ=255)
                                                                                                      ccacaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgGGCGTGCCCGCGAACgg                                                                                                                                       >  1:858124‑M2/50‑66 (MQ=255)
                                                                                                      ccacaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgGGCGTGCCCGCGAACgg                                                                                                                                       <  2:858124‑M2/17‑1 (MQ=255)
                                                                                                      ccacaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgAGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGTAAGGAAAGCGGGCCGACGAGAACCAGCCCATccgtgccg                                                   >  2:2547727‑M2/50‑150 (MQ=255)
                                                                                                      ccacaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgAGCGCGCCCGCGAATGGACACACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATccgtgccg                                                   >  2:1101647‑M2/50‑150 (MQ=255)
                                                                                                      acaGGTACAGCGCAAGCCTTGAAGCTTGCGCTGTACCTGTGGGAGCGAGCGCgcccgcgaatggacacacaaccagaccaccggcctggcgaaggctgaactaccgacctattgtgccgtctgagagccgtggcgagtctc                                                          <  1:2013156‑M2/141‑90 (MQ=255)
                                                                                                      acaGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGAGCGCgcccgcgaatgga                                                                                                                                      <  2:1598440‑M2/65‑14 (MQ=255)
                                                                                                      acaGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGAGCGCgcccgcgaatgga                                                                                                                                      >  1:1598440‑M2/1‑52 (MQ=255)
                                                                                                        acaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgAGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATccgtgccgtg                                                 >  1:1168619‑M2/48‑150 (MQ=255)
                                                                                                        aGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTgcccgcgaatggacacacaaccagaccaccggcctggcgaaggctgaactaccgacctattgtgccgtctgagagccgtggcgagtctcatcactcgcta                                               <  2:446706‑M2/150‑101 (MQ=255)
                                                                                                        AGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGtt                                               >  2:886634‑M1/1‑150 (MQ=255)
                                                                                                         ggTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGagcgagcgc                                                                                                                                                   <  1:2926539/49‑2 (MQ=38)
                                                                                                         ggTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGagcgagcgc                                                                                                                                                   >  2:2926539/1‑48 (MQ=255)
                                                                                                         caggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGaa                                                                                       >  1:1398614‑M2/47‑111 (MQ=255)
                                                                                                          gTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTgcccgcgaatggacacacaaccagaccaccggcctggcgaaggctgaactaccgacctattgtgccgtctgagagccgtg                                                                   <  2:615282‑M2/128‑81 (MQ=255)
                                                                                                          gTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTgcccgcgaatggacacacaaccagaccaccggcctggcgaaggctgaactaccgacctattgtgccgtctgagagccgtg                                                                   >  1:615282‑M2/1‑48 (MQ=255)
                                                                                                           TACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCaa                                            <  1:2533337‑M1/150‑1 (MQ=255)
                                                                                                            aCAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGAGCGCgcccgcgaatggacacacaaccagaccaccggcctggcgaaggctgaactaccgacctattgtgccgtctgagagccgtggcgagtctcatcactcgctagccc                                           >  2:2538813‑M2/1‑46 (MQ=255)
                                                                                                             cAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGACTCACCTCAATCCAAGACCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATa                                          >  1:1456428/1‑150 (MQ=255)
                                                                                                               tctcgcaagcttcaaggcttgcgctgtacctgtgggagcgAGCGCGCCCGCGAATGGACACACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATa                                          <  1:1101647‑M2/110‑1 (MQ=255)
                                                                                                               gcgcAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATAcc                                        >  1:2502632/1‑150 (MQ=255)
                                                                                                                cgcAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTgcccgcaaatggacacacaaccagaccaccggcctggcgaagactgaactaccgacctattgtgccgtctgagagccgtggcgagtctcatcacccgctagcccgtca                                       >  2:2204837‑M2/1‑42 (MQ=255)
                                                                                                                   aaGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCTGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCt                                    >  2:2819860/1‑150 (MQ=255)
                                                                                                                   aaGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGAACAACGATATCTTGCCCATCCGTGCCGTGTTCAATACCGCCt                                    >  2:245467/1‑150 (MQ=255)
                                                                                                                       cTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTgcg                                >  1:1060056/1‑150 (MQ=255)
                                                                                                                       cTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTgcg                                >  2:46943/1‑150 (MQ=255)
                                                                                                                       cTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTgcc                                >  2:1408003/1‑149 (MQ=255)
                                                                                                                        ttGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCcgac                                                                         <  2:2438019/108‑1 (MQ=255)
                                                                                                                          gAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGcca                             >  1:537205/1‑150 (MQ=255)
                                                                                                                           aaGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGccac                            <  1:1527275/150‑1 (MQ=255)
                                                                                                                             gCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCcgac                                                                         >  2:2279430/1‑103 (MQ=255)
                                                                                                                                   gagaCACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTg                    <  2:32529/150‑1 (MQ=255)
                                                                                                                                     gaCACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCg                  <  1:1574421/150‑1 (MQ=255)
                                                                                                                                       tgtacctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATccgtgccgt                                                  >  2:2623062‑M2/17‑118 (MQ=255)
                                                                                                                                          acctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGgtg               >  2:1903028‑M2/14‑150 (MQ=255)
                                                                                                                                            ctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGgtgtg             >  2:2977647‑M2/12‑150 (MQ=255)
                                                                                                                                            ctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGgtgtg             <  1:775946‑M2/139‑1 (MQ=255)
                                                                                                                                                gggAGCGGGCGTgcccgcgaatggacacacaaccagaccaccggcctggcgaaggctgaactaccgacctattgtgccgtctgagagccgtggcgagtctcatcactcgctagcccgtcactctccctgtaaactgcgtgggtttttcat         >  1:446706‑M2/1‑12 (MQ=255)
                                                                                                                                                 ggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCca        >  2:1620504‑M2/7‑150 (MQ=255)
                                                                                                                                                   agcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCcaca      <  2:537205‑M2/146‑1 (MQ=255)
                                                                                                                                                       ggCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATc  <  2:1104033/150‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                     
TGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATC  >  NC_002947/5743297‑5743595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: