| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 1,648,905 | (A)6→7 | intergenic (‑142/+154) | oprB‑II ← / ← PP_1446 | carbohydrate‑selective porin/TonB‑dependent receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,648,899 | 1 | . | A | 96.6% | 719.1 / 15.6 | 210 | intergenic (‑136/+160) | oprB‑II/PP_1446 | carbohydrate‑selective porin/TonB‑dependent receptor |
| Reads supporting (aligned to +/- strand): ref base . (2/5); new base A (84/117); total (86/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 238 total aligned reads displayed.
GCAGTTGGAACATGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑G‑AAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATCGTATTCGCGGGTGAACCCGTTCCTACACCGATC > NC_002947/1648751‑1649043 | cAGTTGGAACATGAGATATCGCTATCTTTTGTTTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAATCGTTTCAGCTTGCGGCGGGGAGGATTTAGGGGAAGTTATAA‑G‑aa < 2:4793213/150‑1 (MQ=255) aGTTGGAACATGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGTCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑G‑caa < 2:252756/150‑1 (MQ=255) aGTTGGAACATGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑G‑aaa < 2:1786272/150‑1 (MQ=255) gTTGGAACATGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑G‑aaa‑a > 1:4830198/1‑150 (MQ=255) tGGAACATGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCTAGCGCATCGAAGGGCGGGCCCCTCAAGGGATATGGCGACAATATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGTAGTTATAA‑G‑aaa‑aa‑a < 2:1658526/150‑1 (MQ=255) gtaaCATGATATATCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGATGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCTATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGTGGAAGTTATAA‑G‑aaa‑aa‑aa < 1:2696655/148‑2 (MQ=255) ggAACATGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑G‑aaa‑aa‑aa < 1:1165693/150‑2 (MQ=255) ggAACATGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑G‑aaa‑aa‑aa > 1:1300624/1‑149 (MQ=255) ggAACATGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑G‑aaa‑aa‑aa > 2:195963/1‑149 (MQ=255) ggAACATGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑G‑aaa‑aa‑aa < 1:2903070/150‑2 (MQ=255) ggAACATGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑G‑aaa‑aa‑aa < 1:2551522/150‑2 (MQ=255) gAACATGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑G‑aaa‑aa‑aag < 1:4027066/150‑3 (MQ=255) gAACATGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑G‑aaa‑aa‑aag < 1:2772451/150‑3 (MQ=255) aaCATGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑G‑aaa‑aa‑aaga < 2:1387269/150‑4 (MQ=255) cATGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑G‑aaa‑aa‑aagaca < 1:5635705/150‑6 (MQ=255) cATGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTAGCGGCGGGGAGGAGATAGGGGAAGTTATAA‑G‑aaa‑aa‑aagaca > 1:2072732/1‑145 (MQ=255) tGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACaaa < 2:4299409/150‑1 (MQ=255) gagaTAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGGTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑G‑AAATAA‑AGACAAAt > 1:1128688/1‑150 (MQ=255) agaTAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAAtt > 1:2227930/1‑150 (MQ=255) tAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTc < 2:120331/150‑1 (MQ=255) aGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCg < 2:5100239/150‑1 (MQ=255) cTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCaga < 2:2317158/150‑1 (MQ=255) cTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCaga < 2:2243258/150‑1 (MQ=255) cTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCaga < 2:2005021/150‑1 (MQ=255) cTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCaga > 2:590288/1‑150 (MQ=255) tATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCagag > 1:1254402/1‑150 (MQ=255) tATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCagag > 1:5170127/1‑150 (MQ=255) ttttGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGAtt > 1:3487384/1‑150 (MQ=255) ttttGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGAtt < 1:1788201/150‑1 (MQ=255) ttttGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGAtt < 1:5339567/150‑1 (MQ=255) tGATTATTGAAAAACACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGAttgtt < 2:5959111/150‑1 (MQ=255) tGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGAttgtt < 1:2258398/150‑1 (MQ=255) tGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGAttgtt < 1:5546529/150‑1 (MQ=255) tGATTAATGAAAAAAACGCCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGAttgtt < 2:2341732/150‑1 (MQ=255) attattGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGAGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGAttgttgt > 2:1801849/1‑150 (MQ=255) ttattGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGAttgttgtt < 1:887064/150‑1 (MQ=255) ttattGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGAttgttgtt < 2:1032232/150‑1 (MQ=255) ttattGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGAttgttgtt < 2:669455/150‑1 (MQ=255) ttattGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGAttgttgtt < 1:4977357/150‑1 (MQ=255) atattTAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGAttgttgtt < 1:4541895/149‑1 (MQ=255) atattGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTAAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTAGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGAttgttgtt < 2:5188232/149‑1 (MQ=255) ttGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGaa > 2:4653567/1‑150 (MQ=255) aaaaaaCGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACggg < 1:2504663/150‑1 (MQ=255) aaaaaCGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGc < 1:414187/150‑1 (MQ=255) aCGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACa < 2:5680551/150‑1 (MQ=255) ggCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAgt > 2:1667174/1‑150 (MQ=255) aaGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAgtcgt < 2:3486587/150‑1 (MQ=255) gcgcATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCa < 2:5730756/150‑1 (MQ=255) cgcATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCAt < 1:2186327/150‑1 (MQ=255) cgcATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGCGGAACTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCAt < 1:3105911/150‑1 (MQ=255) aaGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGa < 1:1022856/150‑1 (MQ=255) aaGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGa < 1:5426088/150‑1 (MQ=255) aaGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGa > 1:3665995/1‑150 (MQ=255) ggcCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGgt < 2:6003376/150‑1 (MQ=255) gcCCCTCAATGTATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGCGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGgtg < 2:4250833/150‑1 (MQ=255) ccTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAg < 2:4892692/150‑1 (MQ=255) cTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCa < 1:1661079/98‑1 (MQ=255) cTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAgt > 1:5972865/1‑149 (MQ=255) cTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAgg > 1:6025605/1‑150 (MQ=255) tCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGa < 1:4236909/150‑1 (MQ=255) tCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGa < 2:1013623/150‑1 (MQ=255) tGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCgg < 1:5470300/150‑1 (MQ=255) tGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCgg < 2:2744400/150‑1 (MQ=255) ggATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCggg < 2:1163140/150‑1 (MQ=255) atatGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGtt > 1:1822709/1‑150 (MQ=255) tGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAg > 2:2793228/1‑132 (MQ=255) tGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCAc < 2:5463182/150‑1 (MQ=255) ggCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCAcc < 2:3419449/150‑1 (MQ=255) ggCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCAcc > 1:3871379/1‑150 (MQ=255) gACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCcgc < 2:418163/150‑1 (MQ=255) cAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGa < 1:77401/150‑1 (MQ=255) ttCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCg > 1:2961084/1‑150 (MQ=255) gATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGtt > 2:3635338/1‑150 (MQ=255) gAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGcc < 2:3945950/150‑1 (MQ=255) aGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCAGCGAATGCGCCGGTTGCCCt > 1:939268/1‑150 (MQ=255) gCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTa > 2:3354618/1‑150 (MQ=255) tttCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCa > 2:380422/1‑150 (MQ=255) tCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATc < 2:787417/150‑1 (MQ=255) tCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATc < 2:1159806/150‑1 (MQ=255) tCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATc < 2:298549/150‑1 (MQ=255) cAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGGTAACCCCCGAATTCGCCGGTTGCCCGACCagag > 1:56178/1‑147 (MQ=255) aGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATCGt > 2:3325397/1‑150 (MQ=255) ttGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATCGTAtt > 1:3834477/1‑150 (MQ=255) ttGCGGCGGGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGGTGCCCTACCAACGTAtt > 1:5182207/1‑150 (MQ=255) cggcggGGAGGATATAGGGGAAGTTATAC‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATCGTATTcgc < 1:2664894/150‑1 (MQ=255) gcggGGAGGATCTAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATCGTATTCGCgg < 1:1539952/150‑1 (MQ=255) gcggGGAGGATATAGTGGAAGTTATAA‑G‑AAA‑AATATACAATTTGTCGCTTTTGATTGTTGTTGTACGGGCAACAGTCGTCATTAATCGAGTCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCAGGTTGCCCTACCATCGTATTCGCgg < 1:436198/150‑1 (MQ=255) gcggGGAGGATATAGGGGAAGTTATAC‑GCAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCgg < 2:5305738/150‑1 (MQ=25) gcggGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATCGTATTCGCgg < 2:3167670/150‑1 (MQ=255) gcggGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATCGTATTCGCgg < 1:980667/150‑1 (MQ=255) gcggGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATCGTATTCGCgg < 2:178913/150‑1 (MQ=255) gcggGGAGGATATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCgg < 2:1254402/150‑1 (MQ=21) gcggGGAGCATATAGCGGAAGTTATAACA‑AAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCgg < 1:3534410/150‑1 (MQ=21) gaggaTATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATCGTATTCGCGGGTGaa < 1:3073588/150‑1 (MQ=255) aggaTATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATCGTATTCGCGGGTGAAc < 1:3325397/150‑1 (MQ=255) ggaTATAGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATCGTATTCGCGGGTGAAcc < 2:5346807/150‑1 (MQ=255) ataGGGGAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATCGTATTCGCGGGTGAACCCGtt < 1:2000147/150‑1 (MQ=255) ataGGCGAAGTTATAATA‑AAA‑AA‑AGACAACTTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATACGTTGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCgct < 1:537535/150‑3 (MQ=18) gggAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATCGTATTCGTGGGTGAACCCGTTCCTa > 2:2833621/1‑150 (MQ=255) gggAAGTTATAA‑GAAAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATCGTATTCGCGGGTGAACCCGTTCCTa > 1:5990383/1‑150 (MQ=255) | GCAGTTGGAACATGAGATAGCGCTATCTTTTGATTATTGAAAAAAACGGCAAGCGCATCGAAGGGCGGGCCCCTCAATGGATATGGCGACAAGATTGTTCGATGAAGCGTTTCAGCTTGCGGCGGGGAGGATATAGGGGAAGTTATAA‑G‑AAA‑AA‑AGACAAATTGTCGCAGAGGATTGTTGTTGAACGGGCAACAGTCGTCATTAATCGAGGCAGGTGTAGGAGCGGGTTCACCCGCGAATGCGCCGGTTGCCCTACCATCGTATTCGCGGGTGAACCCGTTCCTACACCGATC > NC_002947/1648751‑1649043 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |