BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	4,340,120	0	G	C	39.6%	118.3 / 130.7	106	intergenic (+61/‑270)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
Reads supporting (aligned to +/- strand): ref base G (24/40); new base C (18/24); total (42/64)
Fisher's exact test for biased strand distribution p-value = 6.85e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 115 total aligned reads displayed.

GGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCA  >  NC_002947/4339972‑4340269

ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAgg                                                                                                                                                      <  2:4327451/150‑1 (MQ=255)

ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAgg                                                                                                                                                      <  1:3746095/150‑1 (MQ=255)

ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAgg                                                                                                                                                      <  1:3070928/150‑1 (MQ=255)

ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAgg                                                                                                                                                      <  1:1983457/150‑1 (MQ=255)

ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAgg                                                                                                                                                      <  2:464459/150‑1 (MQ=255)

ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAgg                                                                                                                                                      <  2:5726859/150‑1 (MQ=255)

ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAgg                                                                                                                                                      <  2:2951045/150‑1 (MQ=255)

  ggCCGCCGCTGACATCCGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGt                                                                                                                                                    <  2:3072552/150‑1 (MQ=255)

  ggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGt                                                                                                                                                    <  2:308809/150‑1 (MQ=255)

   gccgccGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTg                                                                                                                                                   <  1:1502925/150‑1 (MQ=255)

    ccgccgCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGa                                                                                                                                                  <  2:1319336/150‑1 (MQ=255)

    ccgccgCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGa                                                                                                                                                  <  1:5285223/150‑1 (MQ=255)

    ccgccgCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGa                                                                                                                                                  <  1:1097760/150‑1 (MQ=255)

    ccgccgCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTGAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGa                                                                                                                                                  <  2:5745815/150‑1 (MQ=255)

     cgccgcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGac                                                                                                                                                 <  1:2838299/150‑1 (MQ=255)

        cgcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGAcacc                                                                                                                                              <  2:710629/150‑1 (MQ=255)

          cTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGAcaccac                                                                                                                                            <  2:836457/150‑1 (MQ=255)

          cTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGAcaccac                                                                                                                                            <  1:2199368/150‑1 (MQ=255)

           tGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACaccacc                                                                                                                                           <  1:5526380/150‑1 (MQ=255)

                   gcgGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCCCGCATGCGAGGGTGTCACCACCGACGCagt                                                                                                                                   >  2:3981308/1‑148 (MQ=255)

                   gcgGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGGTTACCCGCGAATGCGAGGGTGACACCACCGACGCAtt                                                                                                                                   >  2:3981661/1‑150 (MQ=255)

                      gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                <  1:4897911/150‑1 (MQ=25)

                      gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                <  1:6023036/150‑1 (MQ=25)

                      gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                <  1:798558/150‑1 (MQ=25)

                      gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                <  1:2874857/150‑1 (MQ=25)

                      gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                <  2:1167770/150‑1 (MQ=25)

                      gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                <  2:1638148/150‑1 (MQ=25)

                      gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                <  2:332714/150‑1 (MQ=25)

                      gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc                                                                                                                                <  1:642617/150‑1 (MQ=255)

                      gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc                                                                                                                                <  2:1195635/150‑1 (MQ=255)

                      gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc                                                                                                                                <  1:4998402/150‑1 (MQ=255)

                      gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTAATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                <  2:786280/150‑1 (MQ=25)

                      gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTAATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                <  2:786289/150‑1 (MQ=25)

                       ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgcg                                                                                                                               <  2:2318163/150‑1 (MQ=25)

                        gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                              <  2:5701952/150‑1 (MQ=25)

                        gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                              <  2:3619162/150‑1 (MQ=25)

                        gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                              <  2:3778302/150‑1 (MQ=25)

                        gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                              <  1:4591818/150‑1 (MQ=25)

                        gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                              <  1:1168596/150‑1 (MQ=255)

                        gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                              <  2:1637360/150‑1 (MQ=255)

                        gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                              <  1:2077493/150‑1 (MQ=255)

                        gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                              <  1:1888959/150‑1 (MQ=255)

                        gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                              <  1:2077502/150‑1 (MQ=255)

                        gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                              <  1:1197414/150‑1 (MQ=255)

                        gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                              <  1:338848/150‑1 (MQ=255)

                        gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                              <  1:3531904/150‑1 (MQ=255)

                        gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                              <  2:4495474/150‑1 (MQ=255)

                        gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                              <  2:40501/150‑1 (MQ=255)

                        gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCAGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                              <  1:3627432/150‑1 (MQ=25)

                        gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCAGCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                              <  2:5044165/150‑1 (MQ=25)

                         cTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGTACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCggg                                                                                                                             <  2:5434318/150‑1 (MQ=255)

                         cTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCggg                                                                                                                             <  2:3483219/150‑1 (MQ=25)

                           ggCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTa                                                                                                                           <  2:1381406/150‑1 (MQ=255)

                              gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAAc                                                                                                                        <  2:3199961/150‑1 (MQ=25)

                              gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAAc                                                                                                                        <  1:2511719/150‑1 (MQ=25)

                              gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAAc                                                                                                                        <  2:136685/150‑1 (MQ=255)

                               ggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAAcc                                                                                                                       <  2:692916/150‑1 (MQ=255)

                                   aTGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCt                                                                                                                   <  2:4468055/150‑1 (MQ=255)

                                        cTGGAGGTGGGGCAGAGCA‑CCCGTGTCGCCCCGGGGTGGGATGGCTGCGAACACAAACGCACTTGATTTCGGGGGGCCGTGTTGGCGCGGGTTTACCGGCCAATGCGCGGGTGAAACCACCGACGAATGCGCGGGTAAACCCGCTCCTAc                                                                                                              <  2:1418485/150‑1 (MQ=19)

                                                  tgCAGAGCATCCCGT‑CCGCCCGGGGGATGGTTGGCTGCCAACACAAAAGCATTTTATTTCGGGGGGCCGTTTCGGCGGGGTTTTCCCCGCTATGGCGCGGGTGACACCCCCGCCGATTTGGGGGGTAAACCCGCTCCTACAGGGCCCTTg                                                                                                    <  2:5268374/150‑1 (MQ=255)

                                                         cATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                              >  2:2278559/1‑117 (MQ=18)

                                                              cGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgcg                                                                                                                               <  1:5736697/111‑1 (MQ=18)

                                                              cGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgcg                                                                                                                               >  2:5736697/1‑111 (MQ=18)

                                                                                                                            ggAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCAAACCTCTTGCCAAAATCTTGGAATACCATAATATg                           >  2:5532949/1‑150 (MQ=255)

                                                                                                                                 gggTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATc                      >  1:5478382/1‑150 (MQ=25)

                                                                                                                                   gTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATccc                    >  2:1469280/1‑150 (MQ=25)

                                                                                                                                   gTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTg                                          >  2:1062335/1‑128 (MQ=255)

                                                                                                                                   gTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTg                                          <  1:1062335/128‑1 (MQ=255)

                                                                                                                                   gTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATccc                    >  1:185095/1‑150 (MQ=255)

                                                                                                                                      tccccGCGATTGCGGGGTTTACACCACCGCCGATTTGGGGGTTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTa                 <  1:3981661/148‑1 (MQ=255)

                                                                                                                                        cccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGa               >  2:3844228/1‑150 (MQ=255)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGACTCCCATAATATGATATCCCGTAGAc              >  2:5557308/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  2:45375/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  2:5187633/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:1091859/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:2654874/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  2:1670124/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:4877158/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:497122/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  2:342325/1‑150 (MQ=25)

                                                                                                                                         ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  2:2545446/1‑150 (MQ=255)

                                                                                                                                         ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  2:130222/1‑150 (MQ=255)

                                                                                                                                         ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  2:130195/1‑150 (MQ=255)

                                                                                                                                         ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:473799/1‑150 (MQ=255)

                                                                                                                                         ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:5074839/1‑150 (MQ=255)

                                                                                                                                         ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:510846/1‑150 (MQ=255)

                                                                                                                                          cgcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc             >  1:1260374/1‑150 (MQ=255)

                                                                                                                                           gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAATCCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCGCCATACCTGTTGCCAAAATCTTGGAATTGCATAATATGTTATCCCGTTGAcgt            >  2:5282493/1‑148 (MQ=21)

                                                                                                                                           gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTg                                          >  1:5204302/1‑120 (MQ=21)

                                                                                                                                           gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTg                                          <  2:5204302/120‑1 (MQ=21)

                                                                                                                                           gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt            >  1:796132/1‑150 (MQ=25)

                                                                                                                                           gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt            >  2:898460/1‑150 (MQ=25)

                                                                                                                                              aaTGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGa         >  2:5305831/1‑150 (MQ=255)

                                                                                                                                                gtcGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGt       >  2:222652/3‑150 (MQ=255)

                                                                                                                                                 gCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTc      >  2:5409460/1‑150 (MQ=255)

                                                                                                                                                 gCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTc      >  1:4384122/1‑150 (MQ=255)

                                                                                                                                                 gCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTc      >  1:1886679/1‑150 (MQ=255)

                                                                                                                                                  cGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCt     >  1:2332192/1‑150 (MQ=255)

                                                                                                                                                   gAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTg    >  1:4850243/1‑150 (MQ=255)

                                                                                                                                                     gggTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCa  >  2:4587166/1‑150 (MQ=255)

GGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGT‑TCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCA  >  NC_002947/4339972‑4340269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`