New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5681397 =	50 (1.060)	9 (0.230)	9/228	3.1	16.3%	intergenic (‑63/+145)	PP_4986/PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
	?	NC_002947	5681512 =	51 (1.300)					intergenic (‑178/+30)	PP_4986/PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCGGATCTGCAACCTGACCTTGGTTAGGATGTGAGGCGCAGGGCCTGGTGGTCTGGAGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5681568‑5681397 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgacacaaggccgctcccacTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCC  >  NC_002947/5681512‑5681655                                                                                                                                                                                                                                                                                                                              GCGGATCTGCAACCTGACCTTGGTTAGGATGTGAGGCGCAGGGCCTGGTGGTCTGGAGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTT                                                                                                                                                                        >  1:664565/1‑150            ACCTGACCTTGGTTAGGATGTGAGGCGCAGGGCCTGGTGGTCTGGAGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAG                                                                                                                                                             >  2:672116/1‑150               TGACCTTGGTTAGGATGTGAGGCGCAGGGCCTGGTGGTCTGGAGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCC                                                                                                                                                          >  1:147120/1‑150               TGACCTTGGTTAGGATGTGAGGCGCAGGGCCTGGTGGTCCGGAGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCC                                                                                                                                                          >  1:855625/1‑150                        TTAGGATGTGAGGCGCAGGGCCTGGTGGTCTGGAGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGC                                                                                                                                                           >  2:624500/1‑140                        TTAGGATGTGAGGCGCAGGGCCTGGTGGTCTGGAGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGC                                                                                                                                                           <  1:624500/140‑1                        TTAGGATGTGAGGCGCAGGGCCTGGTGGTCTGGAGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGA                                                                                                                                                                   >  2:975454/1‑132                        TTAGGATGTGAGGCGCAGGGCCTGGTGGTCTGGAGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGA                                                                                                                                                                   <  1:975454/132‑1                                                      TGGAGTGGGAGCGGACTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCG                                                                                                                                                         <  1:1141463/112‑1                                                      TGGAGTGGGAGCGGACTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCG                                                                                                                                                         >  2:1141463/1‑112                                                                         TGTCGCGATAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCA                                                                                                >  1:1105445/1‑150                                                                          GTCGCGATAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAG                                                                                               >  2:1024915/1‑150                                                                             GCGATAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTCAGCGAGGTCTGGGGTCAGATC                                                                                            >  2:881907/1‑150                                                                              CGATAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCC                                                                                           >  1:670560/1‑150                                                                                 TAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACTCCAGAC                                                                                                                                           <  1:807112/99‑1                                                                                 TAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACTCCAGAC                                                                                                                                           >  2:807112/1‑99                                                                                                                         TGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAG                                                                                                           >  1:1073042/1‑91                                                                                                                         TGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAG                                                                                                           <  2:1073042/91‑1                                                                                                                                   GGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGACCCGCGTCACGCCCCCGCCCTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTG                                      <  2:1105445/150‑1                                                                                                                                                      TCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGCCACGCACCAGCCTTTCGAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCCCCGCT                   <  1:881907/150‑1                                                                                                                                                         CGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCC                >  2:654186/1‑150                                                                                                                                                         CGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCC                <  1:654186/150‑1                                                                                                                                                           aaACAAGGCCGCTCCCACTCCAGACCACCAGGCGCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCCCCGCTGCCAG              <  2:477953/148‑1                                                                                                                                                            CACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGC             <  2:479257/150‑1                                                                                                                                                            CACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGC             >  1:119236/1‑150                                                                                                                                                                  GCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAAC       >  1:518485/1‑150                                                                                                                                                                      CTCCCACTCCAGACCACCAGGCCCTGCTCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGC   >  1:376813/1‑150                                                                                                                                                                       TCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCC  >  1:343511/1‑150                                                                                                                                                                       TCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCCCTGCCAGCTCCAACCGGCC  >  2:206601/1‑150                                                                                                                                                                         CCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCC  >  1:498301/1‑148                                                                                                                                                                         CCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCC  <  2:498301/148‑1                                                                                                                                                                                                                                                                                                                              GCGGATCTGCAACCTGACCTTGGTTAGGATGTGAGGCGCAGGGCCTGGTGGTCTGGAGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCGGCGGTTCATGCAGTGGCAATGAAAGCCTGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5681568‑5681397 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgacacaaggccgctcccacTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCC  >  NC_002947/5681512‑5681655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.