| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_002947 | 6,098,944 | (CTTCAG)2→1 | coding (196‑201/867 nt) | PP_5350 ← | RpiR family transcriptional regulator |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 6098935 | 6098940 | 6 | 31 [0] | [0] 31 | PP_5350 | RpiR family transcriptional regulator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6098941 = | 0 (0.000) | 31 (1.070) | 29/268 | 0.2 | 100% | coding (204/867 nt) | PP_5350 | RpiR family transcriptional regulator |
| ? | NC_002947 | = 6098934 | 0 (0.000) | coding (211/867 nt) | PP_5350 | RpiR family transcriptional regulator | |||||
GAAAGTGGCCGACCACGTGCTGCTCGACCCGGCTGCCGTCATGCACAGCTCCATGGCCGATTTGGCGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6099088‑6098941‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgaagctgGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGACTACAGCCTGAAGATCTTCGACACCACCCTGCACACCCTGATGGAAGTGCGCGAGCACCTTGATCCGCAGGC < NC_002947/6098934‑6098795 GAAAGTGGCCGACCACGTGCTGCTCGACCCGGCTGCCGTCATGCACAGCTCCATGGCCGATTTGGCGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGC > 1:26503/1‑150 CACGTGCTGCTCGACCCGGCTGCCGTCATGCACAGCTCCATGGCCGATTTGGCGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCT > 2:165331/1‑150 CACGTGCTGCTCGACCCGGCTGCCGTCATGCACAGCTCCATGGCCGATTTGGCGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCT > 1:539018/1‑150 GCTGCTCGACCCGGCTGCCGTCATGCACAGCTCCATGGCCGATTTGGCGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGG < 2:342227/150‑1 CTGCTCGACCCGGCTGCCGTCATGCACAGCTCCATGGCCGATTTGGCGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGG < 2:646160/150‑1 cCGACCCGGCTGCCGTCATGCACAGCTCCATGGCCGATTTGGCGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCA < 2:548996/149‑1 CCGGCTGCCGTCATGCACAGCTCCATGGCCGATTTGGCGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTC > 2:680868/1‑150 TGCCGTCATGCACAGCTCCATGGCCGATTTGGCGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCA < 2:26503/150‑1 GTCATGCACAGCTCCATGGCCGATTTGGCGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTC > 1:236304/1‑150 TGCACAGCTCCATGGCCGATTTGGCGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCA > 2:422265/1‑150 CACAGCTCCATGGCCGATTTGGCGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATC > 2:10723/1‑150 CCATGGCCGATTTGGCGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTGGGGCTTCCAGGACCTGAAGCTGGAGCACAGCCTGGCTCCCGGGTGCAGCTTCGGCCAGTTCGCCATCCACGAAG > 1:263327/1‑150 CATGGCCGATTTGGCGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGA < 2:538868/150‑1 GCCGATTTGGCGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGAT < 1:165331/150‑1 CGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCc > 2:84639/1‑149 GCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGA < 2:539018/150‑1 GCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGA > 1:640393/1‑150 GTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGACTACAGC < 1:10723/150‑1 TGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGTTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGACTACAGCC > 2:300441/1‑150 AGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGACTACAGCCTGAAGATC > 2:668833/1‑150 GACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGACTACAGCCTGAAGATCTTCGACAC < 1:455634/150‑1 TCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGACTACAGCCTGAAGATCTTCGACACCACCC > 1:567742/1‑150 TTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGACGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGACTACAGCCTGAAGATCTTCGACACCACCCTGCACACC < 2:147189/150‑1 CGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGACTACAGCCTGAAGATCTTCGACACCACCCTGCACACCCTGATG < 1:545334/150‑1 CGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGACTACAGCCTGAAGATCTTCGACACCACCCTGCACACCCTGATG < 1:520956/150‑1 CATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGACTACAGCCTGAAGATCTTCGACACCACCCTGCACACCCTGATGGAAGT < 2:640393/150‑1 TTGGCTGCTCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGACTACAGCCTGAAGATCTTCGACACCACCCTGCACACCCTGATGGAAGTGC > 2:92117/1‑150 TCGGGCTTCCAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGACTACAGCCTGAAGATCTTCGACACCACCCTGCACACCCTGATGGAAGTGCGCGAGCAC < 1:300441/150‑1 CAGGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGACTACAGCCTGAAGATCTTCGACACCACCCTGCACACCCTGATGGAAGTGCGCGAGCACCTTGATCCG > 1:525726/1‑150 GGACCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGACTACAGCCTGAAGATCTTCGACACCACCCTGCACACCCTGATGGAAGTGCGCGAGCACCTTGAGCCGCA < 2:83981/150‑1 CCTGAAGCTGGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGACTACAGCCTGAAGATCTTCGACACCACCCTGCACACCCTGATGGAAGTGCGCGAGCACCTTGATCCGCAGGC > 1:157766/1‑150 GAAAGTGGCCGACCACGTGCTGCTCGACCCGGCTGCCGTCATGCACAGCTCCATGGCCGATTTGGCGCACAGCGTGGGTATCAGTGAGCCGACCATCGTGCGTTTCTGCCGGGCCATTGGCTGCTCGGGCTTCCAGGACCTGAAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6099088‑6098941‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgaagctgGCGCAAAGCCTGGCTGCCGGGGCCAGCTTCGGTCAGTTCGCCATCCACGAAGACGATTCGGTCGCCGACTACAGCCTGAAGATCTTCGACACCACCCTGCACACCCTGATGGAAGTGCGCGAGCACCTTGATCCGCAGGC < NC_002947/6098934‑6098795 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |