| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5201663 | 29 (0.690) | 7 (0.230) | 7/192 | 2.8 | 22.6% | intergenic (‑101/‑79) | PP_4582/PP_4583 | membrane protein/putative Peptidase |
| ? | NC_002947 | = 5201684 | 27 (0.890) | intergenic (‑122/‑58) | PP_4582/PP_4583 | membrane protein/putative Peptidase | |||||
AGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTA > NC_002947/5201541‑5201831 | aGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcg > 1:330663‑M2/1‑144 (MQ=255) agtgtaGTAGTTCTCGGTCCTGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTT‑CCCGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgg > 1:402079‑M2/2‑143 (MQ=255) gtgtAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCAGCTCCTACCTCGGTGCGATCCCTGTTggagcggg < 1:807721‑M2/150‑9 (MQ=255) acgTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACGCGCTCCTACCTCGCTTCGAACCCTGTTggagcggggttacc < 2:719699‑M2/149‑15 (MQ=255) ggTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggaacgggtttacccgcgtaga < 1:966388‑M2/150‑23 (MQ=255) ggttgtgcgtGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccg > 2:112765‑M2/4‑123 (MQ=255) tCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacag > 1:255606‑M2/1‑117 (MQ=255) gTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggc < 1:727943‑M2/150‑36 (MQ=255) gCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTTGCGGGTAAACCCGCTGCTACCGCGGTGCGATCGCTGTTggagggggtttgcgcgcgacgagggcggcccacgtc < 2:745482‑M2/150‑37 (MQ=255) gCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTgtagcgggtttacccgcgaagaggccggtacaggcaa < 1:747587‑M2/150‑38 (MQ=255) aGCCAGGCAAAGAGATGCCTATGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTc > 1:685987/1‑150 (MQ=255) aGGCAAAGAGATGCCTATGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcggg < 1:154970‑M2/114‑9 (MQ=255) aGGCAAAGAGATGCCTATGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcggg > 2:154970‑M2/1‑106 (MQ=255) ccTATGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCTTGTGCCGGCCTTCTCGCGGGTAACCCCGCTCCTACCTCGGTGCGATCACTGATGGCGCGGCGTGACCCGCGAAGAGGCCCGCACACGGATCTACAATCAAGAGACCATCa > 1:921963/1‑150 (MQ=255) tATGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGTGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAAt > 1:220433/1‑150 (MQ=255) tATGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCCGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGACGAGGCCGGCACAGGCAACTCCAATCAACAGACCTTCAAt > 1:768743/1‑150 (MQ=255) tGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGtt > 2:428112/1‑89 (MQ=255) tGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGtt < 1:428112/89‑1 (MQ=255) ttgt‑CCGGGCGGAGACAGAGTTTGCCTGTGCCGCTCTCTCCGCGGGTCACCCTTCTCCTCCCGTGGTGCGATGCCTGTGGGATCGGGTTGACAAGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGcc < 2:727943/147‑1 (MQ=255) gggCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAAcc > 1:837535/1‑150 (MQ=255) gcAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCg > 1:661846/1‑150 (MQ=255) aGACAGTGTTTGCCTGTGCCGGCCTCTTCTCGGGTAAACCCGCTGCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACCTCCAATCAACAGACCTTCACTGCCAACCAAGCCGCAACCCCCGAt > 1:224293/1‑150 (MQ=38) aGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATACCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGAt > 2:168905/1‑150 (MQ=255) aCAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaa < 2:603074‑M2/85‑21 (MQ=255) aCAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaa > 1:603074‑M2/1‑65 (MQ=255) ccTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGa < 2:661846/150‑1 (MQ=255) tgCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCCCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCAGAATGGCAAAGCCGActat > 2:324788/1‑147 (MQ=38) cGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGcc > 2:934278/1‑150 (MQ=255) tctTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGa > 2:840990/1‑150 (MQ=255) tctTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGa > 1:370494/1‑150 (MQ=255) tctTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGa > 1:795368/1‑150 (MQ=255) gggTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTAt > 2:48058/1‑150 (MQ=255) ggTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcctggcttgcacgaacaccatgaccgagaacga < 2:653741‑M2/150‑116 (MQ=255) aaCCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcctggcttgcacgaacaccatgaccgagaacgactac < 2:954965‑M2/150‑120 (MQ=255) aCCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCaa > 2:634127/1‑120 (MQ=255) aCCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCaa < 1:634127/120‑1 (MQ=255) cccGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcctggcttgcacgaacaccatgaccgagaacgactacac < 1:795556‑M2/150‑122 (MQ=255) gCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgc > 2:72379‑M2/1‑26 (MQ=255) gCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgc < 1:72379‑M2/109‑84 (MQ=255) gCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCa > 2:116431/1‑129 (MQ=255) gCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCa < 1:116431/129‑1 (MQ=255) cTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaa > 1:98740‑M2/1‑25 (MQ=255) cTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaa < 2:98740‑M2/45‑21 (MQ=255) tCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCaa < 1:324788/150‑1 (MQ=255) tACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAg > 1:719125/1‑150 (MQ=255) aCCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcctggcttgcacgaacaccatgaccgagaacgactacaccttcgcctg > 1:954965‑M2/1‑20 (MQ=255) tCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGAtt < 2:746245/101‑1 (MQ=255) tCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGAtt > 1:746245/1‑101 (MQ=255) gCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctgtgcgggccttgtacgaacaccatgaccgagaacgactacaccttcgcctggggcttgt > 1:653741‑M2/1‑12 (MQ=255) ctttttGGAGCGGGTTTGCCCGCGAAGAGGCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAg < 2:837535/146‑1 (MQ=255) tGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGt > 1:798509/1‑150 (MQ=255) gTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTa > 1:671164/1‑150 (MQ=255) | AGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTT‑CCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTA > NC_002947/5201541‑5201831 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |