New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5984491	45 (1.070)	13 (0.370)	10/220	2.4	23.6%	intergenic (+31/+58)	PP_5242/ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
	?	NC_002947	= 5984511	47 (1.350)					intergenic (+51/+38)	PP_5242/ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase

TTCGGTGGCTCAGGCCCACGGCGGGCAGCTGCAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGATGTCGTTGCGCCAGTCGCGGTG  >  NC_002947/5984364‑5984656                                                                                                                                                    |                                                                                                                                                   ttCGGTGGCTCAGGCCCACGGCGGGCAGCTGCAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGgc                                                                                                                                                  >  1:936477‑M2/1‑148 (MQ=255)         cTCAGGCCCACGGCGGGCAGCTGCAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGgcgggtttac                                                                                                                                          >  1:215542‑M2/1‑140 (MQ=255)         cTCAGGCCCACGGCGGGCAGCTGCAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCCCCTACAGCCGACCGTAGGAgcgggtttac                                                                                                                                          >  1:514055‑M2/1‑140 (MQ=255)          tCAGGCCCACGGCGGGCAGCTGCAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGgcgggtttacc                                                                                                                                         >  2:299631‑M2/1‑139 (MQ=255)          tCAGGCCCACGGCGGGCAGCTGCAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCCCCTACAGCCGACCGTAGGAgcgg                                                                                                                                                <  2:493478‑M2/143‑5 (MQ=255)           cAGGCCCACGGCGGGCAGCTGCAGGCGTTGGTGTCGCTGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGgcgggtttaccc                                                                                                                                        >  1:220490‑M2/1‑138 (MQ=255)            aGGCCCACGGCGGGCAGCTGCAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGgcgggtttacccg                                                                                                                                       <  2:985261‑M2/150‑14 (MQ=255)                ccACGGCGGGCAGCTGCAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaa                                                                                                                                   <  1:892439‑M2/150‑18 (MQ=255)                ccACGGCGGGCAGCTGCAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaa                                                                                                                                   <  1:788966‑M2/150‑18 (MQ=255)                   cggcggGCAGCTGCAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaagag                                                                                                                                >  1:968867‑M2/1‑130 (MQ=255)                   cggcggGCAGCTGCAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaagag                                                                                                                                >  2:892439‑M2/1‑130 (MQ=255)                     gcggGCAGCTGCAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaagaggc                                                                                                                              >  1:985261‑M2/1‑128 (MQ=255)                       gggCAGCTGCAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGACTATCGCCTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCa                                                                                                                           <  2:349690/150‑1 (MQ=38)                              tGCAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAgg                                                                                                                    <  2:788966/150‑1 (MQ=255)                              tGCAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACACGCTCCTACGGTCGGCTGTAGCGGCGGGGTTA‑CCCGCGTAGAGGCCCGTACAgg                                                                                                                    >  1:899306/1‑150 (MQ=39)                                cAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGTATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGtt                                                                                                                  <  1:596816/150‑1 (MQ=255)                                  ggCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTAAGTGCGGGTAAATCCGCTTCTGCTGTCGGCTGTAGAGGCGGGTTTA‑ACCGCGAAGAGGCCAGTACAGGTTTa                                                                                                                <  1:918537/150‑1 (MQ=255)                                             cGCAGTTGCGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACGGGTTTACATCAGCGCGa                                                                                                     <  1:395509/150‑1 (MQ=255)                                                    gggTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTCCAGGTTTACATCAGCGCGAGGCCAgc                                                                                              >  2:957446/1‑150 (MQ=255)                                                           tGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAgcgctggcctc                                                                                                >  2:573957/1‑134 (MQ=255)                                                           tGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAgcgctggcctc                                                                                                <  1:573957/141‑8 (MQ=255)                                                            gctggATTCGTCTCAATCTGCCTTTGACTCACGCATAGCGTTTTCCAGCCTCTTCTCGGGTTACCCCTCTCATGCGCGCGGCTGTATGTTCGGGTTTA‑CGCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTa                                                                                      <  1:496386/147‑1 (MQ=255)                                                              cGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGgcgggttta                                                                                                                                           <  1:41632‑M2/96‑10 (MQ=255)                                                              cGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGgcgggttta                                                                                                                                           >  2:41632‑M2/1‑87 (MQ=255)                                                                     gtgtCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTtcat                                                                             >  1:651365/1‑150 (MQ=255)                                                                       gtCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTtcatca                                                                           >  1:1680/1‑150 (MQ=255)                                                                         ccgTCTGCCTTTGAATCACCCATCGCCTGGGCCGGCCTCTTCGCCGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAgg                                                                         <  1:518782/148‑1 (MQ=255)                                                                         cAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAgg                                                                         >  1:652696/1‑150 (MQ=255)                                                                                  tttGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTACCCCGCG‑AGAGGCCAGTACAGGTTTACATCAGCGCGACGCAAGCCCTGCGAAGCCGTTCATCAGGGTGCGGTAg                                                                >  1:809416/1‑150 (MQ=37)                                                                                        tCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGa                                                                                                     >  1:940883/1‑107 (MQ=255)                                                                                        tCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGa                                                                                                     <  2:940883/107‑1 (MQ=255)                                                                                        tCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGt                                                                                 <  1:380613/127‑1 (MQ=255)                                                                                        tCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGt                                                                                 >  2:380613/1‑127 (MQ=255)                                                                                        tCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTtcatca                                                                           >  1:283514/1‑133 (MQ=255)                                                                                        tCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTtcatca                                                                           <  2:283514/133‑1 (MQ=255)                                                                                        tCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTgggg                                                          >  2:559243/1‑150 (MQ=255)                                                                                           cGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATa                                                       <  2:651365/150‑1 (MQ=255)                                                                                            gCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGGAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCGAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATAc                                                      >  2:895113/1‑150 (MQ=255)                                                                                                  ccTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCg                                                >  1:590152/1‑150 (MQ=255)                                                                                                         cGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGAcagcag                                         >  1:751394/1‑150 (MQ=255)                                                                                                          ggCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAgg                                        <  2:652696/150‑1 (MQ=255)                                                                                                           gCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGgc                                                                                                                                                  >  1:435746‑M2/1‑42 (MQ=255)                                                                                                           gCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGgc                                                                                                                                                  <  2:435746‑M2/44‑3 (MQ=255)                                                                                                             ctctTCGCGCGTAAACCCGCTCCTACGGTCGGGTGTCGGGGCGGGGTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTa                                     >  2:802098/1‑150 (MQ=255)                                                                                                                      ggTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCt                            >  2:969847/1‑150 (MQ=255)                                                                                                                      ggTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCt                            >  1:627056/1‑150 (MQ=255)                                                                                                                       gTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCtt                           <  1:969847/150‑1 (MQ=255)                                                                                                                          aaCCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGa                        >  2:934276/1‑150 (MQ=255)                                                                                                                           aCCCGCCCCTACAGCCGACCGTCGGAGCGGGTATA‑CCCGCGCAGAGGCCGGCACAGGTTTAGATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTTATCACGTTGCGGTAGTTAGGGATACGCTGCGACAGCAGGTTCCCCGCCCCTTCgtt                       >  2:159195/1‑148 (MQ=21)                                                                                                                            cccGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaagaggccggcacaggctatgcgtgattcaaaggcagactgacacgaatccggcatccacccaactgcgacaccagcgcctgcagctgcccgccgtgggcctgagccacc                       <  2:110706‑M2/150‑126 (MQ=255)                                                                                                                            cccGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaagaggccggcacaggctatgcgtgattcaaaggcagactgacacgaatc                                                                                   <  2:247599‑M2/90‑66 (MQ=255)                                                                                                                            cccGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaagaggccggcacaggctatgcgtgattcaaaggcagactgacacgaatc                                                                                   >  1:247599‑M2/1‑25 (MQ=255)                                                                                                                            cccGCCCCTACAGCCGACCGTAGGAGCGGGTTTA‑CCCGCGAAGCGGCCGGCACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGATg                      >  2:346295/1‑150 (MQ=25)                                                                                                                             ccGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaagaggccggcacaggctatgcgtgattcaaaggcagactgacacgaatccggcatccacccaactgcgacaccagcgcctgcagctgcccgccgtgggcctgagccaccg                      <  2:678873‑M2/150‑127 (MQ=255)                                                                                                                             ccGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaagaggccggcacaggctatgcgtgattcaaaggcagactgacacgaatccggcatccacccaactgcgacaccagcgcctgcagctgcccgccgtgggcctga                             <  1:493478‑M2/143‑120 (MQ=255)                                                                                                                             ccGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaagaggccggcacaggctatgcgtgattcaaaggcagactgacacgaatccggcatccacccaactgcgacac                                                            <  2:815162‑M2/112‑89 (MQ=255)                                                                                                                             ccGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaagaggccggcacaggctatgcgtgattcaaaggcagactgacacgaatccggcatccacccaactgcgacac                                                            >  1:815162‑M2/1‑24 (MQ=255)                                                                                                                             ccGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaagaggccggcacaggctatgcgtgattcaaaggcagactga                                                                                           <  2:696132‑M2/81‑58 (MQ=255)                                                                                                                             ccGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaagaggccggcacaggctatgcgtgattcaaaggcagactga                                                                                           >  1:696132‑M2/1‑24 (MQ=255)                                                                                                                             ccGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaagaggccagtacaggttatgcgtgattcaaaggcagactgacacgaatccggcatccacccaactgcgacaccagcgcctgcagctgcccgccgtgggcctgagcc                          <  2:692694‑M2/146‑123 (MQ=255)                                                                                                                             ccGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaagaggccagtacaggttatgcgtgattcaaaggcagactgacacgaatccggcatccacccaactgcgacaccagcgcctgcagctgcccgccgtgggcctgagcc                          >  1:692694‑M2/1‑24 (MQ=255)                                                                                                                             ccGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGATGt                     >  1:904932/1‑150 (MQ=255)                                                                                                                             ccGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGATGt                     >  2:148828/1‑150 (MQ=255)                                                                                                                              cGCTCCTACGGTCGGCTGTAGGGgcgggtttacccgcgaagaggccggcacaggctatgcgtgattcaaaggcagactgacacgaatccggcatccacccaactgcgacaccagcgcctgcagctgcccgccgtgggcctgagccaccga                     <  2:637734‑M2/150‑128 (MQ=255)                                                                                                                              cGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGATGTc                    <  2:1680/150‑1 (MQ=255)                                                                                                                                cTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGATGTCGt                  <  2:590152/150‑1 (MQ=255)                                                                                                                                   cTACGGTCGGCTGTAGGGgcgggtttacccgcgaagaggccagtacaggttatgcgtgattcaaaggcagactgacacgaatccggcatccacccaactgcgacaccagcgcctgcagctgcccgccgtgggcctgagccaccgaactac                >  2:238693‑M2/1‑18 (MQ=255)                                                                                                                                   cTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGATGTCGTTgc               >  1:823430/1‑150 (MQ=255)                                                                                                                                   cTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGATGTCGTTgc               <  2:809416/150‑1 (MQ=255)                                                                                                                                     aCGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGATGTCGTTgcgc             >  1:46781/1‑150 (MQ=255)                                                                                                                                         tCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGATGTCGTTGCGCCAGt         >  2:557580/1‑150 (MQ=255)                                                                                                                                             ttGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACGGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGATGTCGTTGCGCCAGTcgcg     <  1:957446/149‑1 (MQ=255)                                                                                                                                              tGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGATGTCGTTGCGCCAGTCGCgg    >  2:444891/1‑150 (MQ=255)                                                                                                                                                tAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGATGTCGTTGCGCCAGTCGCGGTg  <  2:627056/150‑1 (MQ=255)                                                                                                                                                   gggCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGa                        <  2:6538/125‑1 (MQ=255)                                                                                                                                                   gggCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGa                        >  1:6538/1‑125 (MQ=255)                                                                                                                                                    |                                                                                                                                                   TTCGGTGGCTCAGGCCCACGGCGGGCAGCTGCAGGCGCTGGTGTCGCAGTTGGGTGGATGCCGGATTCGTGTCAGTCTGCCTTTGAATCACGCATAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTCGGCTGTAGGGGCGGGTTTA‑CCCGCGAAGAGGCCAGTACAGGTTTACATCAGCGCGAGGCCAGCGCTGCGTAGCTGTTCATCAGGTTGCGGTAGTTGGGGATACGCTGCGACAGCAGGTTACCCAGCCCTTCGATGTCGTTGCGCCAGTCGCGGTG  >  NC_002947/5984364‑5984656

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.