| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,863,398 | Δ1 bp | 5.6% | coding (1042/1068 nt) | PP_1666 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,863,398 | 0 | T | . | 5.6% | 227.9 / 7.1 | 72 | coding (1042/1068 nt) | PP_1666 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (29/39); new base . (2/2); total (31/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.20e-01 | |||||||||||
GCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCTGGTCGGCATCATGCTGGC > NC_002947/1863249‑1863546 | gCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGt < 1:907126/150‑1 (MQ=255) aaTCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTc > 2:700007/1‑150 (MQ=255) aCAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCtt < 1:770954/150‑1 (MQ=255) aGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGc > 1:890391/1‑150 (MQ=255) cTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGt > 1:3489/1‑150 (MQ=255) gCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGc < 2:561492/150‑1 (MQ=255) cccAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCt > 2:804630/1‑150 (MQ=255) cccAGCTTGGCCTCGCCAAGCTGCAGGAAGTGCCCGTCGAGCAGGCACCGGCGGTGCTGGCCACGCCAGTACCGGCAGTCGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCt < 2:265282/150‑1 (MQ=255) ccAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTg < 1:402089/150‑1 (MQ=255) aGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGt < 2:890391/150‑1 (MQ=255) cTTGGCCAGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGc > 1:1087847/1‑132 (MQ=255) cTTGGCCAGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGc < 2:1087847/132‑1 (MQ=255) ggcctggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGa < 2:969016/150‑1 (MQ=255) ggcctggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGa < 2:434365/150‑1 (MQ=255) gcctggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAg > 2:700356/1‑150 (MQ=255) tggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAgcgc < 2:237048/150‑1 (MQ=255) aaGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGcc < 2:726127/150‑1 (MQ=255) tGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACGCAAGCCG‑TCGAACGGCTTgggt > 2:82422/1‑119 (MQ=255) tGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACGCAAGCCG‑TCGAACGGCTTGGGt < 1:82422/122‑1 (MQ=255) tGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGtga < 2:994768/150‑1 (MQ=255) gCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCAGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGtgac > 2:1006767/1‑150 (MQ=255) ggAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGttt > 1:566397/1‑120 (MQ=255) ggAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGttt < 2:566397/120‑1 (MQ=255) ggAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGtgactga < 1:700356/150‑1 (MQ=255) gAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGtgactgac > 2:35768/1‑150 (MQ=255) aaGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACa < 2:246760/150‑1 (MQ=255) ggTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCg > 1:1261982/1‑150 (MQ=255) cGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTg < 1:700007/150‑1 (MQ=255) gAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTc > 1:1002995/1‑93 (MQ=255) gAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTc < 2:1002995/93‑1 (MQ=255) gAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTgg > 1:539285/1‑150 (MQ=255) gccggCACCGCCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCCCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCCCTTGCCGTGACTGACATGCGTCCCTGGAt > 2:661229/4‑150 (MQ=255) gCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGAt > 1:983333/1‑150 (MQ=255) gCACCGGCGGTGCCGGCCATGCCAGTACCGTCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTg > 1:1534024/1‑107 (MQ=255) gCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTg < 2:1534024/107‑1 (MQ=255) cggcggTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATctggctgg < 1:499195/150‑1 (MQ=255) ggCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCAct > 1:907134/1‑150 (MQ=255) cATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCActgct < 2:539285/150‑1 (MQ=255) aTGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCActgctg < 2:1261982/150‑1 (MQ=255) ccAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATc > 1:498694/1‑150 (MQ=255) cAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTg < 1:1094205/99‑1 (MQ=255) cAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTg > 2:1094205/1‑99 (MQ=255) gTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCt < 1:223682/150‑1 (MQ=255) tACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCtg < 2:614328/150‑1 (MQ=255) ccGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCtgtg < 2:3489/150‑1 (MQ=255) cGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGtgc > 1:420509/1‑150 (MQ=255) aGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACACGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTgctgct < 1:8041/150‑1 (MQ=255) gccgcAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGc > 2:1120800/1‑150 (MQ=255) gccgcAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGc > 1:602529/1‑150 (MQ=255) cgcAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTaa > 1:437902/1‑70 (MQ=255) cgcAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTaa < 2:437902/70‑1 (MQ=255) cgcAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCt < 2:498694/150‑1 (MQ=255) gcAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGAGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTg > 2:279659/1‑150 (MQ=255) gcgcAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAat < 1:378384/150‑1 (MQ=255) gcgcAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAat > 1:762221/1‑150 (MQ=255) gcAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAatat < 1:1120800/150‑1 (MQ=255) ccGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTa > 1:1309968/1‑150 (MQ=255) ccGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAAGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTa > 1:245637/1‑150 (MQ=255) cgcgCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTAc < 2:550206/150‑1 (MQ=255) gcCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGcc < 1:1006767/150‑1 (MQ=255) gcCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGcc < 2:383679/150‑1 (MQ=255) gcCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGcc > 1:975192/1‑150 (MQ=255) gcgcAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGAGCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTTCGCCGGTc < 2:563817/150‑1 (MQ=255) ccatctcagcACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTCCTTCCTGCACAATATTCTTACGCCGTTcc < 1:43259/144‑1 (MQ=255) gcAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGAACTGCTGTTCGCTGTCCTGCTATATACCCTTGACAATATTCTTACGCCGTTCCt < 1:35768/150‑1 (MQ=255) cagccagcACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCTg < 2:762221/150‑1 (MQ=255) agcACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTATTTGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCtagatcg > 2:43259/1‑144 (MQ=255) gcACCCAAGCCGTTCG‑ACGGCTTGCGTCTTCTCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCTGGTCGGc < 1:661229/150‑1 (MQ=255) aaacgcAAGCCG‑TCGAACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCTGGTCGGc > 2:581475/6‑150 (MQ=255) aCCCAAGCCGTTCG‑ACGGCTTGTGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAata > 2:1038698/1‑125 (MQ=255) aCCCAAGCCGTTCG‑ACGGCTTGTGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAata < 1:1038698/125‑1 (MQ=255) cgcAAGCCG‑TCGAACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCTGGTCGGcatc < 1:581475/148‑1 (MQ=255) gTTCG‑ACGTCGTTCGTTTTCGCCGATCAGCCGCCATTCCCGCGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCTGGTCGGCATCATGCTGGc < 2:676274/150‑1 (MQ=255) | GCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCG‑ACGGCTTGCGTTTTCGCTGGTAAGGAGCGCTTGCCGTGACTGACATGCGTCGCTGGATCTGGCTGGGCGCTGCACTGCTGATCGCTGTGCTGCTTTATAGCCTGCACAATATTCTTACGCCGTTCCTGGTCGGCATCATGCTGGC > NC_002947/1863249‑1863546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |