| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,697,369:1 | +A | 5.2% | intergenic (+23/‑54) | hslV → / → hslU | ATP‑dependent HslVU protease peptidase subunit/protease HslVU ATPase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,697,369 | 1 | . | A | 5.2% | 324.7 / 10.5 | 77 | intergenic (+23/‑54) | hslV/hslU | ATP‑dependent HslVU protease peptidase subunit/protease HslVU ATPase subunit |
| Reads supporting (aligned to +/- strand): ref base . (37/36); new base A (2/2); total (39/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.26e-01 | |||||||||||
TGCTGAACAAGACCGACCTCTCGGCCCGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGC > NC_002947/5697225‑5697513 | tgctgAACAAGACCGACCTCTCGGCCCGCGAAATCGCCGAGACCGCCCTGAACCTCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCg > 2:807682/1‑148 (MQ=255)tgctgAACAAGACCGACCTCTCGGCCCGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCg < 1:807682/148‑1 (MQ=255) tgAACAAGACCGACCTCTCGGCCCGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGaa > 2:1025485/1‑150 (MQ=255) aaCAAGACCGACCTCTCGGCCCGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑ACCGGGAAgg > 2:1004450/1‑150 (MQ=255) aCAAGACCGACCTCTCGGCCCGCGACACCGCCCTGTTCGGCTTTAACATCGCCGGCGACAGCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAggg < 2:131076/150‑1 (MQ=255) cAAGACCGACCTCTCGGCCCGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAgggg > 1:739504/1‑150 (MQ=255) aaGACCGACCTCTCGGCCCGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCg < 1:296753/140‑1 (MQ=255) aaGACCGACCTCTCGGCCCGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCg > 2:296753/1‑140 (MQ=255) gaccgaccTCTCGGCCCGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCtt > 2:1447264/1‑150 (MQ=255) accgaccTCTCGGCCCGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTCACCGG‑GAAGGGGcgcc < 1:1004450/150‑4 (MQ=255) cgaccTCTCGGCCCGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTc < 2:1081282/150‑1 (MQ=255) gaccTCTCGGCCCGCGAAATCGCCGCGCCCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTcc < 2:1025991/150‑1 (MQ=255) accTCTCGGCCCGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCa > 1:1022534/1‑150 (MQ=255) accTCTCGGCCCGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCa > 2:1411462/1‑150 (MQ=255) ctctCGGCCCGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACg > 1:654715/1‑150 (MQ=255) cGGCCCGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGa < 2:347769/150‑1 (MQ=255) ccGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGCCTGATTCAGCTGTTCTGGCGCCCCTTC‑CTGGTGAAGGGGCTTTTCCACGCTGACTCa > 1:480695/1‑150 (MQ=255) ccGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGa > 1:1406999/1‑146 (MQ=255) ccGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGa < 2:1406999/146‑1 (MQ=255) cgcgAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCAc < 1:1267585/150‑1 (MQ=255) gcgAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCAcc > 2:105798/1‑150 (MQ=255) gCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCAGGCCGACTGATTCAACTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAg < 1:1434579/150‑1 (MQ=255) tagaCCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGc < 1:178/119‑1 (MQ=255) gagaCCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGc > 2:178/1‑120 (MQ=255) cGCCCTGAACCTCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CTGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTAt < 2:480695/150‑1 (MQ=255) tGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATc < 2:1289330/150‑1 (MQ=255) tGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATc < 1:105798/150‑1 (MQ=255) gCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCAt < 2:687097/150‑1 (MQ=255) gCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCAt < 1:734735/150‑1 (MQ=255) ggCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGAc > 1:1282867/1‑150 (MQ=255) aCATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGAccccc < 1:1025485/150‑1 (MQ=255) aTCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCcg > 1:234437/1‑150 (MQ=255) cTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTc < 2:652265/96‑1 (MQ=255) cTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTc > 1:652265/1‑96 (MQ=255) cTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGCCCGTATTTATCATTTCCATGACCCCCcgcg > 2:1024172/1‑150 (MQ=255) tGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCga < 2:739504/150‑1 (MQ=255) tGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGAAACCTATTGATCATGTCCATGACCCCCCGCga > 2:1440551/1‑150 (MQ=255) ttCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGt < 2:1022534/150‑1 (MQ=255) tCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTc < 1:1288193/150‑1 (MQ=255) cACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTcc < 2:1282867/150‑1 (MQ=255) ccaaccaCAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGAt < 1:128781/119‑1 (MQ=255) ccaaccaCAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGAt > 2:128781/1‑119 (MQ=255) ccTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCTCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAAcc < 1:1440551/150‑1 (MQ=255) ccTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAAcc < 2:654715/150‑1 (MQ=255) cTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCg > 2:1608127/1‑150 (MQ=255) gaggagCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCAcatcat > 1:1540537/1‑150 (MQ=255) cAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATc > 2:170598/1‑94 (MQ=255) cAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATc < 1:170598/94‑1 (MQ=255) ggACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTc > 2:1230467/1‑97 (MQ=255) ggACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTc < 1:1230467/97‑1 (MQ=255) ccTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGgacg > 2:1131375/1‑150 (MQ=255) cTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGgacga > 2:340322/1‑150 (MQ=255) gACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCaa > 1:500485/1‑150 (MQ=255) tGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGGCCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGc < 2:1272259/133‑1 (MQ=255) tGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGGCCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGc > 1:1272259/1‑133 (MQ=255) aTTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCaa > 2:1060362/1‑63 (MQ=255) aTTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCaa < 1:1060362/63‑1 (MQ=255) tCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGcc > 1:1593413/1‑150 (MQ=255) aGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGt > 1:1075984/1‑150 (MQ=255) aGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGt > 1:1410021/1‑150 (MQ=255) aGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCAAAGAAATAAACCGCCACATTGTTGGTGCCCACTACCCCAAGCGCGCCGt > 2:1586227/1‑150 (MQ=255) gCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCAGGGTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTg < 1:1411462/150‑1 (MQ=255) gCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTg > 1:590094/1‑150 (MQ=255) tGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGacgacg < 2:1575280/134‑1 (MQ=255) tGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGacgacg > 1:1575280/1‑134 (MQ=255) ttCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCa < 2:1410021/150‑1 (MQ=255) cTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCg > 2:323031/1‑118 (MQ=255) cTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCg < 1:323031/118‑1 (MQ=255) gcgcCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGcc < 1:1074611/150‑1 (MQ=255) aagcCCCTTCACCGG‑GAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTAt < 2:1577142/56‑1 (MQ=25) aagcCCCTTCACCGG‑GAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTAt > 1:1577142/3‑58 (MQ=25) aagcCCCTTC‑ACCGGGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGCTCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGcc > 2:658517/3‑150 (MQ=255) gcCCCTTCACCGG‑GAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAAc > 1:514725/1‑95 (MQ=255) gcCCCTTC‑ACCGGGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAAc < 2:514725/95‑1 (MQ=255) cccTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTgc < 1:1586227/150‑1 (MQ=255) ttC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGcc < 1:1146939/143‑1 (MQ=255) ttC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGcc > 2:1146939/1‑143 (MQ=255) | TGCTGAACAAGACCGACCTCTCGGCCCGCGAAATCGCCGAGACCGCCCTGAACATCGCCGGCGACATCTGCGTGTTCACCAACCACAACCTGACCATCGAGGAGCAGGACCTGGCCGACTGATTCAGCTGTTCTGGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGC > NC_002947/5697225‑5697513 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |