Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,997,245:1 +G 20.0% intergenic (‑158/+42) PP_5252 ← / ← PP_5253 hypothetical protein/arylesterase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,997,2451.G20.0% 180.5 / 54.8 65intergenic (‑158/+42)PP_5252/PP_5253hypothetical protein/arylesterase
Reads supporting (aligned to +/- strand):  ref base . (24/28);  new base G (8/5);  total (32/33)
Fisher's exact test for biased strand distribution p-value = 3.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.40e-01

GACTAGGGGCCGGCAGGGGGACTGCGAAGCATGCCGGTTGATGCAAGGCCTGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACTGCAAAACCGTGCGGCGCCCCGGCATACACCTTCAGCTCGGCGCCACGAATC  >  NC_002947/5997098‑5997392
                                                                                                                                                    |                                                                                                                                                   
gACTAGGGGCCGGCAGGGGGACTGCGAAGCATGCCGGTTGATGCAAGGCCTGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAc                                                                                                                                                   <  2:1477596/150‑1 (MQ=255)
  cTAGGGGCCGGCAGGGGGACTGCGAAGCATGCCGGTTGATGCAAGGCCTGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGt                                                                                                                                                 >  2:1359854/1‑150 (MQ=255)
   tAGGGGCCGGCAGGGGGACTGCGAAGCATGCCGGTTGATGCAAGGCCTGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACagacgt                                                                                                                                                 >  2:115162/1‑145 (MQ=255)
    aGGGGCCGGCAGGGGGACTGCGAAGCATGCCGGTTGATGCAAGGCCTGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCt                                                                                                                                               <  2:70978/150‑1 (MQ=255)
      gggCCGGCAGGGGGACTGCGAAGCATGCCGGTTGATGCAAGGCCTGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGt                                                                                                                                             <  2:768952/150‑1 (MQ=255)
              aGGGGGACTGCGAAGCATGCCGGTTGATGCAAGGCCTGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCga                                                                                                                                     <  1:1471018/150‑2 (MQ=255)
                         gAAGCATGCCGGTTGATGCAAGGCCTGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGACGTTGTAGGAGc                                                                                                                                       <  1:716036/137‑1 (MQ=255)
                         gAAGCATGCCGGTTGATGCAAGGCCTGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGACGTTGTAGGAGc                                                                                                                                       >  2:716036/1‑137 (MQ=255)
                                gCCGGTTGATGCAAGGCCTGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGttt                                                                                                                   >  2:1304113/1‑150 (MQ=255)
                                gCCGGTTGATGCAAGGCCTGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGttt                                                                                                                   <  1:1215061/150‑1 (MQ=255)
                                 ccGGTTGATGAAAGGCCTGGGCTTGAATGGATGTGCGGTGGGTTGAAGAACGTTACCCCTGGTCAGGCGTTTTGCTCTCCGCGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGACGTTGTAGGAGCGGGTTTACCCGCGaagaggcc                                                                                                                  <  1:115162/150‑7 (MQ=21)
                                  ccgatcttGCAAGGCCTGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCCGATAAGCCCGCTGGTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTcc                                                                                                                 <  1:30827/143‑1 (MQ=38)
                                    gTTGATGCAAGGCCTGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCca                                                                                                               >  1:812593/1‑150 (MQ=255)
                                          gCAAGGCCTGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCcagatcgg                                                                                                         >  2:30827/1‑144 (MQ=255)
                                                  tGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCt                                                                                                                                               <  1:1595898/104‑1 (MQ=255)
                                                  tGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCt                                                                                                                                               >  2:1595898/1‑104 (MQ=255)
                                                       ttGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGACGTTGTAGGAGCgg                                                                                                                                     >  1:1576640/1‑109 (MQ=38)
                                                       ttGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGACGTTGTAGGAGCgg                                                                                                                                     <  2:1576640/109‑1 (MQ=38)
                                                       ttGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTACTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGacc                                                                                            <  1:1370443/150‑3 (MQ=255)
                                                         gAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCGGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTACACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGc                                                                                          >  1:130917/1‑150 (MQ=255)
                                                           aTGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCa                                                                                        <  1:1323860/150‑1 (MQ=255)
                                                            tGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGAAACTAGGAGCGGGTATAACAAAGAATGTGTCCCACAATTACCGCTGAAGGAACGCCac                                                                                       >  1:1251992/1‑149 (MQ=37)
                                                            tGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGt                                                                                                                                             >  1:725507/1‑96 (MQ=255)
                                                            tGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGt                                                                                                                                             <  2:725507/96‑1 (MQ=255)
                                                              gATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAAc                                                                                            <  2:484306/143‑1 (MQ=255)
                                                              gATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAAc                                                                                            >  1:484306/1‑143 (MQ=255)
                                                                  tgCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTc                                                                                 <  1:1304113/150‑1 (MQ=255)
                                                                              aagaagGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAgctg                                                                     >  2:787745/1‑150 (MQ=255)
                                                                                  agGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCtgctgc                                                                 <  1:1172224/150‑1 (MQ=255)
                                                                                   ggTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTgcg                                                                >  1:865851/1‑150 (MQ=255)
                                                                                    gTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGaa                                                                                             >  2:414245/1‑120 (MQ=255)
                                                                                    gTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGaa                                                                                             <  1:414245/120‑1 (MQ=255)
                                                                                     ttAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCa                                                              <  2:812593/150‑1 (MQ=255)
                                                                                         cccTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGaa                                                                                                 <  2:943422/111‑1 (MQ=255)
                                                                                         cccTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGaa                                                                                                 >  1:943422/1‑111 (MQ=255)
                                                                                         cccTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTAGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCaa                                                                                    >  2:79023/1‑124 (MQ=255)
                                                                                         cccTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTAGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCaa                                                                                    <  1:79023/124‑1 (MQ=255)
                                                                                           cTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGc                                                                                                     >  1:393496/1‑105 (MQ=255)
                                                                                           cTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGc                                                                                                     <  2:393496/105‑1 (MQ=255)
                                                                                           cTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTc                                                        >  2:1179192/1‑150 (MQ=255)
                                                                                              gTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAGCGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACt                                                     <  1:787745/150‑1 (MQ=255)
                                                                                                  aGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAg                                                                                                                                           >  1:1060181/1‑60 (MQ=255)
                                                                                                  aGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAg                                                                                                                                           <  2:1060181/60‑1 (MQ=255)
                                                                                                  aGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACTGCaa                                                 <  1:1359854/150‑1 (MQ=255)
                                                                                                   gCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGa                                                           >  1:218643/1‑139 (MQ=255)
                                                                                                   gCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGa                                                           <  2:218643/139‑1 (MQ=255)
                                                                                                           ctgcCTGGGCCGGCCGCTTCGCGGGTACACCCGCTCGTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACTGCAAAACCGTgcg                                        <  1:884153/150‑1 (MQ=255)
                                                                                                            tgcCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGACGTTGTAGGAg                                                                                                                                        <  1:329564/53‑1 (MQ=14)
                                                                                                            tgcCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGACGTTGTAGGAg                                                                                                                                        >  2:329564/1‑53 (MQ=14)
                                                                                                                       gccTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACTGCAAAACCGTGCGGCGCCCCGGCAt                            >  2:224470/1‑150 (MQ=255)
                                                                                                                                  ggTAAACCCGCTCCTACAGACGTTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACTGCAAAACCGTGCGGCGCCCCGGCATACACCTTCAGc                 >  1:967429/1‑150 (MQ=255)
                                                                                                                                     aaaCCCGCTCCTACAACGTCTGTAGGAGCGGTTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACTGCAAAACCGTGCGGCGCCCCGGCATACACCTTCAGCTCg              <  1:19694/150‑1 (MQ=255)
                                                                                                                                        cccGCTCCTACAGACGTTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACTGCAAAACCGTGCGGCGCCCCGGCATACACCTTCAGCTCGgcg           >  1:984200/1‑150 (MQ=255)
                                                                                                                                        cccGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACCATTCCAGAAAAAGACACGCCAGAAAGACATCATTCAGCTGCGGCGCAGTAGTCACTGCAAAACCGTGCGGCGCCCCGGCATACACCTTCAGATCggaa           >  2:1005379/1‑148 (MQ=255)
                                                                                                                                         ccGCTCCTACAGACGTTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCa                                                                         >  2:1216995/1‑87 (MQ=25)
                                                                                                                                         ccGCTCCTACAGACGTTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCa                                                                         <  1:1216995/87‑1 (MQ=25)
                                                                                                                                         ccGCTCCTACAGACGTTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACTGCAAAACCGTGCGGCGCCCCGGCATACACCTTCAGCTCGgcgc          >  2:1599337/1‑150 (MQ=255)
                                                                                                                                           gCTCCTACAGACGTTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACTGCAAAACCGTGCGGCGCCCCGGCATACACCTTCAGCTCGGCGCCa        >  2:629955/1‑150 (MQ=255)
                                                                                                                                           gCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACTGCAAAACCGTGCGGCGCCCCGGCATACACCTTCAGCTCGGCGCCa        >  1:1575550/1‑150 (MQ=255)
                                                                                                                                                tACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACTGc                                                   <  2:1630511/102‑1 (MQ=255)
                                                                                                                                                tACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACTGc                                                   >  1:1630511/1‑102 (MQ=255)
                                                                                                                                                 aCAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACTGCAAAACCGTGCGGCGCCCCGGCATACACCTTCAGCTCGGCGCCACGAATc  <  1:224470/150‑1 (MQ=255)
                                                                                                                                                  cAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGa                                                           >  2:1257505/1‑92 (MQ=255)
                                                                                                                                                  cAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGa                                                           <  1:1257505/92‑1 (MQ=255)
                                                                                                                                                  cAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACTGCAAAACCGTgc                                         >  1:309438/1‑110 (MQ=255)
                                                                                                                                                  cAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACTGCAAAACCGTgc                                         <  2:309438/110‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GACTAGGGGCCGGCAGGGGGACTGCGAAGCATGCCGGTTGATGCAAGGCCTGGGCTTGAATGGATGTGCGGTGGGTTGAAGAAGGTTAGCCCTGGTCAAGCTTTTTGCTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGTCTGTAGGAGCGGGTTTACCCGCGAATGTTTCCCACAATTACCGCTGAAGGAACGCCAGCAAGTCCTCATTCAGCTGCTGCGCATGAGTCACTGCAAAACCGTGCGGCGCCCCGGCATACACCTTCAGCTCGGCGCCACGAATC  >  NC_002947/5997098‑5997392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: