| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,300,198:1 | +C | 6.3% | intergenic (+53/+29) | pvdQ → / ← lpxH | acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,300,198 | 1 | . | C | 6.3% | 327.4 / 15.3 | 80 | intergenic (+53/+29) | pvdQ/lpxH | acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase |
| Reads supporting (aligned to +/- strand): ref base . (42/33); new base C (2/3); total (44/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.71e-01 | |||||||||||
CGTTTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTT > NC_002947/3300054‑3300346 | cGTTTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCg > 1:1611936/1‑148 (MQ=255)cGTTTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCg < 2:1611936/148‑1 (MQ=255) gTTTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTTATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGc > 2:216888/1‑150 (MQ=255) gTTTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCTCGCggg > 2:844553/1‑150 (MQ=255) cGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGAGCCT‑GCGGGCTTGccc > 1:1030438/1‑150 (MQ=255) gcgcAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGa < 1:922619/150‑1 (MQ=255) cgcAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTATTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACA‑GGGCCTCGCGGGCAAGCCcgcagg < 2:174596/150‑4 (MQ=38) cgcAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAg > 2:914251/1‑150 (MQ=255) aTCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCTCGCGGGCAAGCCCGC‑AGGcccc > 1:800756/1‑149 (MQ=39) aTCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCTCGCGGGCAAGCCCGC‑AGGcccc < 1:844553/150‑2 (MQ=39) aTCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCt > 2:141697/1‑150 (MQ=255) tCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCTCGCGGGCAAGCCCGC‑AGGcccct < 2:800756/150‑3 (MQ=39) aGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCACATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTaa > 2:449895/1‑150 (MQ=255) ggCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCg < 2:285386/126‑1 (MQ=255) ggCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCg > 1:285386/1‑126 (MQ=255) gATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCa < 1:914251/150‑1 (MQ=255) aGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAAc < 1:946904/150‑1 (MQ=255) tACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTc > 1:683901/1‑150 (MQ=255) ccGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGa > 1:996306/1‑150 (MQ=255) cGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCcgc < 1:661878/121‑1 (MQ=255) cGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCcgc > 2:661878/1‑121 (MQ=255) cGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGaa < 2:891269/150‑1 (MQ=255) cGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGaa > 1:509918/1‑150 (MQ=255) ggAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGa < 1:391133/121‑1 (MQ=255) ggAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGa > 2:391133/1‑121 (MQ=255) tggtgATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGcc > 1:594513/1‑150 (MQ=255) tggtgATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGcc < 1:746237/150‑1 (MQ=255) tggtgATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGcc > 2:779609/1‑150 (MQ=255) gtgATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCaa > 2:1634422/1‑150 (MQ=255) cGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTg < 1:912789/150‑1 (MQ=255) cGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTg < 1:141697/150‑1 (MQ=255) gACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTTGAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTc < 1:284789/150‑1 (MQ=255) gACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTc > 1:245098/1‑150 (MQ=255) gACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTc > 1:240537/1‑150 (MQ=255) gACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTc > 2:1416855/1‑150 (MQ=255) aaGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTc > 2:1436394/1‑150 (MQ=255) ggggCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAAc < 2:442599/150‑1 (MQ=255) tAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGc < 1:784082/76‑1 (MQ=255) tAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGc > 2:784082/1‑76 (MQ=255) gTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGc < 2:245098/150‑1 (MQ=255) agccagccCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCa > 2:1272306/1‑150 (MQ=255) gccagccCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCaa > 2:1008002/1‑150 (MQ=255) cccTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACcgcg < 1:1272306/150‑1 (MQ=255) ccTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCgcgg < 2:594513/150‑1 (MQ=255) tGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCa > 2:639333/1‑87 (MQ=255) tGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCa < 1:639333/87‑1 (MQ=255) gCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTcc > 1:1261010/1‑150 (MQ=255) cGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTccc < 1:1008002/150‑1 (MQ=255) cTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTc > 1:1573015/1‑74 (MQ=255) cTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTc < 2:1573015/74‑1 (MQ=255) cTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGcc < 1:681243/150‑1 (MQ=255) gcgcCGGACCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGATTACCCATGTTTATAATTTAAATTTTAAATACTCGAACGACTCCAACTGACAGACCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCa < 1:779609/150‑1 (MQ=255) gcCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGcc < 1:1019585/101‑1 (MQ=255) gcCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGcc > 2:1019585/1‑101 (MQ=255) cGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGaaaa > 1:1458921/1‑75 (MQ=255) cGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGaaaa < 2:1458921/75‑1 (MQ=255) gCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGa > 1:912482/1‑150 (MQ=255) ccATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTg < 2:1174120/57‑1 (MQ=255) ccATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTg > 1:1174120/1‑57 (MQ=255) ccATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATa > 1:1438369/1‑150 (MQ=255) cATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTcc < 2:1118073/131‑1 (MQ=255) cATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGACCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTcc > 1:1118073/1‑131 (MQ=255) gcgGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGt > 2:1545082/1‑150 (MQ=255) gggTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGc > 2:111229/1‑150 (MQ=255) taatctcGCTCATACAGGGGCCT‑GCTTGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCgg < 2:912482/144‑1 (MQ=255) tAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCgg < 2:240537/150‑1 (MQ=255) aaaCCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGc < 2:996306/150‑1 (MQ=255) aCCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTg < 2:1438369/150‑1 (MQ=255) aCCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTg > 2:1432239/1‑150 (MQ=255) aCCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTg < 1:1432239/150‑1 (MQ=255) cccGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTgg > 1:1493107/1‑150 (MQ=255) cTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGa > 2:425505/1‑150 (MQ=255) cTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGa > 1:301560/1‑150 (MQ=255) ggggCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATc < 1:1634422/150‑1 (MQ=255) ggggCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCAGGCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATc > 1:1333459/1‑150 (MQ=255) gggCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCa > 1:978164/1‑150 (MQ=255) ccT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGGCATCGGCCATCAgtg > 2:1327052/1‑148 (MQ=255) cT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCgcgg < 2:723722/94‑1 (MQ=255) cT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCgcgg > 1:723722/1‑94 (MQ=255) cT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCtt > 1:660285/1‑150 (MQ=255) | CGTTTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTT > NC_002947/3300054‑3300346 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |