| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 142231 | 74 (1.240) | 4 (0.070) | 4/228 | NT | 6.0% | coding (175/822 nt) | PP_0134 | hypothetical protein |
| ? | NC_002947 | = 142322 | 54 (0.950) | coding (266/822 nt) | PP_0134 | hypothetical protein | |||||
AGCCGTTTTGGCCGCCACCCTGCTGCCAATCTTTACCCCGGCATTCGCCGACCCTGTGCAGGACGCGCGCCTGGAAGGCGCCCTGCAAACCGCCTTGTCACTGAACCGCATGCTTGATTCATTTCGCATCAAGGTTGAAGTGGACGGCAAGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/142077‑142231‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaggTTCTCTACCTGTTCGATGCCCCGGGTAGCACGGGCCACGTCCTCGGCCAGCTGCCGCTCGACCTCGTTCTCCACCTCACCGGAAAGCCGCGCCTGCTTGCCGTCCACTTCAACCTTGATGCGAAATGAATCAAGCATGCGGTTCAGT < NC_002947/142322‑142176 AGCCGTTTTGGCCGCCACCCTGCTGCCAATCTTTACCCCGGCATTCGCCGACCCTGTGCAGGACGCGCGCCTGGAAGGCGCCCTGCAAACCGCCTTGTCACTGAACCGCATGCTTGATTCATTTCGCATCAAGGTTGAAGTGGACGGCAA > 1:1453086/1‑150AGCCGTTTCGGCCGCCACCCTGCTGCCAATCTTTACCCCGGCATTCGCCGACCCTGTGCAGGACGCGCGCCTGGAAGGCGCCCTGCAAACCGCCTTGTCACTGAACCGCATGCTTGATTCATTTCGCATCAAGGTTGAAGTGGACGGCAA > 1:360661/1‑150 CCGTTTTGGCCGCCACCCTGCTGCCAATCTTTACCCCGGCATTCGCCGACCCTGTGCAGGACGCGCGCCTGGAAGGCGCCCTGCAAACCGCCTTGTCACTGAACCGCATGCTTGATTCATTTCGCATCAAGGTTGAAGTGGACGGCAAGC > 1:1263334/1‑150 CCGTTTTGGCCGCCACCCTGCTGCCAATCTTTACCCCGGCATTCGCCGACCCTGTGCAGGACGCGCGCCTGGAAGGCGCCCTGCAAACCGCCTTGTCACTGAACCGCATGCTTGATTCATTTCGCATCAAGGTTGAAGTGGACGGCAAGC > 2:1340695/1‑150 AAACCGCCTTGTCACTGAACCGCATGCTTGATTCATTTCGCATCAAGGTTGAAGTGGACGGCAAGCAGGTTCTCTACCTGTTCGATGCCCCGGGTAGCACGGGCCACGTCCTCGGCCAGCTGCCGCTCGACCTCGTTCTCCACCTCACCG > 1:79823/1‑150 CCGCATGCTTGATTCATTTCGCATCAAGGTTGAAGTGGACGGCAAGCAGGTTCTCTACCTGTTCGATGCCCCGGGTAGCACGGGCCACGTCCTCGGCCAGCTGCCGCTCGACCTCGTTCTCCACCTCACCGGAAAGCCGCGCCTGCTTGC > 2:763942/1‑150 GCATGCTTGATTCATTTCGCATCAAGGTTGAAGTGGACGGCAAGCAGGTTCTCTACCTGTTCGATGCCCCGGGTAGCACGGGCCACGTCCTCGGCCAGCTGCCGCTCGACCTCGTTCTCCACCTCACCGGAAAGCCGCGCCTGCTTGCCG < 1:763942/150‑1 AGTGGACGGCAAGCAGGTTCTCTACCTGTTCGATGCCCCGGGTAGCACGGGCCACGTCCTCGGCCAGCTGCCGCTCGACCTCGTTCTCCACCTCACCGGAAAGCCGCGCCTGTTTGCCGTCCACTTCAACCTTGATGCGAAATGAATCAA < 2:79823/150‑1 AGGTTCTCTACCTGTTCGATGCCCCGGGTAGCACGGGCCACGTCCTCGGCCAGCTGCCGCTCGACCTCGTTCTCCACATCACCGGAAAGCCGCGCCTGCTTGCCGTCCACTTCAACCTTGATGCGAAATGAATCAAGCATGCGGTTCAGT < 1:529140/150‑1 AGCCGTTTTGGCCGCCACCCTGCTGCCAATCTTTACCCCGGCATTCGCCGACCCTGTGCAGGACGCGCGCCTGGAAGGCGCCCTGCAAACCGCCTTGTCACTGAACCGCATGCTTGATTCATTTCGCATCAAGGTTGAAGTGGACGGCAAGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/142077‑142231‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaggTTCTCTACCTGTTCGATGCCCCGGGTAGCACGGGCCACGTCCTCGGCCAGCTGCCGCTCGACCTCGTTCTCCACCTCACCGGAAAGCCGCGCCTGCTTGCCGTCCACTTCAACCTTGATGCGAAATGAATCAAGCATGCGGTTCAGT < NC_002947/142322‑142176 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |