| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 401360 = | 43 (0.720) | 14 (0.260) | 10/214 | NT | 30.0% | coding (943/1059 nt) | PP_0334 | transposase |
| ? | NC_002947 | 3968949 = | 27 (0.510) | coding (1033/1179 nt) | PP_3498 | transposase | |||||
GGGGTTGGAGCGCCTAGCGCCCCGGTGGCATTACCCGGTTGGTCAGAGGCTCATAGCCGCCTCCGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCT‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/401518‑401360‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatcgccgcct‑cTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTG > NC_002947/3968949‑3969094 GGGGTTGGAGCGCCTAGCGCCCCGGTGGCATTACCCGGTTGGTCAGAGGCTCATAGCCGCCTCCGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGAT < 2:1619788/150‑1 TCAGAGGCTCATAGCCGCCTCCGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCT‑CTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAG > 2:308759/1‑150 CAGAGGCTCATAGCCGCCTCCGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCT‑CTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGG < 2:585787/150‑1 TAGCCGCCTCCGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGA < 1:118446/96‑1 TAGCCGCCTCCGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGA > 2:118446/1‑96 CGCCTCCGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCT‑CTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTG < 1:308759/150‑1 CTCCGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAG‑ATGATCGCCGCCT‑CTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCA > 2:1019087/1‑141 CTCCGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCACATTTCGATTAGCCAG‑ATGATCGCCGCCT‑CTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCA < 1:1019087/141‑1 TTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCATATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATC < 1:1040902/136‑1 TTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCATATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATC > 2:1040902/1‑136 TTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCT‑CTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGC < 1:666878/113‑1 TTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCT‑CTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGC > 2:666878/1‑113 GTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCTGGCTATCCC > 1:554668/1‑89 GTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCTGGCTATCCC < 2:554668/89‑1 CAGGGCCCATATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCT‑CTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATC < 1:473431/106‑1 CAGGGCCCATATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCT‑CTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATC > 2:473431/1‑106 ATTAGCCAGCCTGATCGCCGCCT‑CTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCG > 2:1609774/1‑150 GCCGCCT‑CTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATC < 1:947465/102‑1 GCCGCCT‑CTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATC > 2:947465/1‑102 GCCT‑CTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCT > 2:214428/1‑150 CCT‑CTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTG < 1:1609774/150‑1 CTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAA < 1:851401/124‑1 CTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAA > 2:851401/1‑124 GGGGTTGGAGCGCCTAGCGCCCCGGTGGCATTACCCGGTTGGTCAGAGGCTCATAGCCGCCTCCGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCT‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/401518‑401360‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatcgccgcct‑cTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTG > NC_002947/3968949‑3969094 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |