| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 401757 = | 63 (1.050) | 10 (0.180) | 7/222 | NT | 14.2% | intergenic (+281/+148) | PP_0334/PP_0335 | transposase/glutathione S‑transferase family protein |
| ? | NC_002947 | 401835 = | 63 (1.140) | intergenic (+359/+70) | PP_0334/PP_0335 | transposase/glutathione S‑transferase family protein | |||||
CCTGAGGGCCCCTTCGCGGGTAAACCCGCTCCTACAAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGCCCGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/401909‑401757‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctccCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGC > NC_002947/401835‑401983 CCTGAGGGCCCCTTCGCGGGTAAACCCGCTCCTACAAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACCCCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGCCCG < 1:116741/149‑1CCTGAGGGCCCCTTCGCGGGTAAACCCGCTCCTACAAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGCCCG > 2:116741/1‑149 TGAGGGCCCCTTCGCGGGTAAACCCGCTCCTACAAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGCCCGCTC > 1:1393054/1‑150 TGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGCCCGCTC < 2:644333/87‑1 TGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGCCCGCTC > 1:644333/1‑87 TTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGG > 1:1637337/1‑150 GCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCAC > 1:373974/1‑150 CCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGC < 2:1003477/59‑1 CCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGC > 1:1003477/1‑59 CCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGC > 1:710801/1‑150 CCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGCCCGCTCCTAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGG < 1:8602/130‑1 CCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGCCCGCTCCTAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGG > 2:8602/1‑130 GAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTA < 2:1637337/150‑1 ACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGC < 2:373974/150‑1 GCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCT > 2:1088067/1‑92 GCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCT < 1:1088067/92‑1 TGTTCGCGGCCAAGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCATACCAC < 2:233431/150‑1 GCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCTAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCTAGGGCCGCGTGACCACCTCTGCATACCACGCCGCCAACGCAG > 2:1577442/1‑150 CTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCCAACCCAGGCTGG < 2:956375/150‑1 TCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCCAACCCAGG < 2:1013588/145‑1 TCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCCAACCCAGG > 1:1013588/1‑145 CCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGC > 2:495673/1‑150 CCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGC > 2:933296/1‑150 CCTGAGGGCCCCTTCGCGGGTAAACCCGCTCCTACAAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGCCCGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/401909‑401757‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctccCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGC > NC_002947/401835‑401983 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |