| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 428666 = | 61 (1.020) | 3 (0.050) | 3/228 | NT | 5.4% | coding (344/957 nt) | PP_0351 | transmembrane sensor |
| ? | NC_002947 | 428700 = | 48 (0.840) | coding (310/957 nt) | PP_0351 | transmembrane sensor | |||||
CCGGCACGCCAGGCGCTGCTGCAATCGCGCGCCAGCCTGCGGCGACGCATTGGCAAGGTTGGCGGCGGGCTGGCCGGCACGTTTCTGCTCGGCGCGCTGCTGGCATGGGTCGGCGCCCCGTCGCTGGCACCCAGCTACTGGCTGGCCGACCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/428820‑428666‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTGGTCC > NC_002947/428700‑428848 CCGGCACGCCAGGCGCTGCTGCAATCGCGCGCCAGCCTGCGGCGACGCATTGGCAAGGTTGGCGGCGGGCTGGCCGGCACGTTTCTGCTCGGCGCGCTGCTGGCATGGGTCGGCGCCCCGTCGCTGGCACCCAGCTACTGGCTGGCCGAC > 2:1320357/1‑150CCGGCACGCCAGGCGCTGCTGCAATCGCGCGCCAGCCTGCGGCGACGCATTGGCAAGGTTGGCGGCGGGCTGGCCGGCACGTTTCTGCTCGGCGCGCTGCTGGCATGGGTCGGCGCCCCGTCGCTGGCACCCAGCTACTGGCTGGCCGAC > 2:1360398/1‑150CCGGCACGCCAGGCGCTGCTGCAATCGCGCGCCAGCCTGCGGCGACGCATTGGCAAGGTTGGCGGCGGGCTGGCCGGCACGTTTCTGCTCGGCGCGCTGCTGGCATGGGTCGGCGCCCCGTCGCTGGCACCCAGCTACTGGCTGGCCGAC < 2:628616/150‑1 GCACGCCAGGCGCTGCTGCAATCGCGCGCCAGCCTGCGGCGACGCATTGGCAAGGTTGGCGGCGGGCTGGCCGGCACGTTTCTGCTCGGCGCGCTGCTGGCATGGGTCGGCGCCCCGTCGCTGGCACCCAGCTACTGGCTGGCCGACCAG < 1:626678/150‑1 CCCGTCGCTGGCACCCAGCTACTGGCTGGCCGACCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCT > 1:678407/1‑150 CCGTCGCTGGCACCCAGCTACTGGCTGGCCGACCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCC > 1:1645114/1‑84 CCGTCGCTGGCACCCAGCTACTGGCTGGCCGACCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCC < 2:1645114/84‑1 CCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTT > 1:1157025/1‑150 CCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTT > 1:1266511/1‑150 CAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTG < 1:1074389/150‑1 CAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGC < 1:1085995/106‑1 CAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGC > 2:1085995/1‑106 CGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTGGTC < 1:1242886/150‑1 GACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTGGTCC < 1:1413912/150‑1 CCGGCACGCCAGGCGCTGCTGCAATCGCGCGCCAGCCTGCGGCGACGCATTGGCAAGGTTGGCGGCGGGCTGGCCGGCACGTTTCTGCTCGGCGCGCTGCTGGCATGGGTCGGCGCCCCGTCGCTGGCACCCAGCTACTGGCTGGCCGACCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/428820‑428666‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTGGTCC > NC_002947/428700‑428848 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |