New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 452108 = | 75 (1.250) | 5 (0.090) | 4/226 | NT | 6.6% | coding (23/1281 nt) | aruC | acetylornithine aminotransferase |
? | NC_002947 | 452135 = | 71 (1.260) | coding (50/1281 nt) | aruC | acetylornithine aminotransferase |
GCCCTTCGTTGTCCCACAACCACGAGCCCTGGCCACGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCTTGGGCTCGGCGGCGGCGGCAGGAGCCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/452263‑452108 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgagcCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACT > NC_002947/452135‑452283 GCCCTTCGTTGTCCCACAACCACGAGCCCTGGCCCCGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCTTGGGCTCGGCGGCGGCGGCAGGAG > 1:1176244/1‑150 CTTCGTTGTCCCACAACCACGAGCCCTGGCCACGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCTTGGGCTCGGCGGCGGCGGCAGGAGCCG > 1:1296204/1‑150 GTTGTCCCACAACCACGAGCCCTGGCCACGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCTTGGGCTCGGCGGCGGCGGCAGGAGCCGAGCC < 1:1548707/150‑1 ACAACCACGAGCCCTGGCCACGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCTTGGGCTCGGCGGCGGCGGCAGGAGCC > 1:672784/1‑137 ACAACCACGAGCCCTGGCCACGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCTTGGGCTCGGCGGCGGCGGCAGGAGCC < 2:672784/137‑1 GCTTGGGCTCGGCGGCGGCGGCAGGAGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTG > 1:828470/1‑108 GCTTGGGCTCGGCGGCGGCGGCAGGAGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTG < 2:828470/108‑1 GCTTGGGCTCGGCGGCGGCAGCAGGAGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCAC < 1:1251093/62‑1 GCTTGGGCTCGGCGGCGGCAGCAGGAGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCAC > 2:1251093/1‑62 TCGGCGGCGGCGGCAGGAGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAA > 1:1307729/1‑150 GCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGAC < 1:614080/150‑1 CCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACT < 2:942203/150‑1 GAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCTTGAGCCCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTC < 2:1277975/150‑1 GCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCAC < 2:166032/150‑1 CCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACT > 1:199909/1‑150 GCCCTTCGTTGTCCCACAACCACGAGCCCTGGCCACGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCTTGGGCTCGGCGGCGGCGGCAGGAGCCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/452263‑452108 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgagcCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACT > NC_002947/452135‑452283 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |