New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 452108 =75 (1.250)5 (0.090) 4/226 NT 6.6% coding (23/1281 nt) aruC acetylornithine aminotransferase
?NC_002947 452135 = 71 (1.260)coding (50/1281 nt) aruC acetylornithine aminotransferase

GCCCTTCGTTGTCCCACAACCACGAGCCCTGGCCACGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCTTGGGCTCGGCGGCGGCGGCAGGAGCCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/452263‑452108
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgagcCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACT  >  NC_002947/452135‑452283
                                                                                                                                                                                                                                                                                                                 
GCCCTTCGTTGTCCCACAACCACGAGCCCTGGCCCCGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCTTGGGCTCGGCGGCGGCGGCAGGAG                                                                                                                                                             >  1:1176244/1‑150
   CTTCGTTGTCCCACAACCACGAGCCCTGGCCACGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCTTGGGCTCGGCGGCGGCGGCAGGAGCCG                                                                                                                                                          >  1:1296204/1‑150
       GTTGTCCCACAACCACGAGCCCTGGCCACGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCTTGGGCTCGGCGGCGGCGGCAGGAGCCGAGCC                                                                                                                                                      <  1:1548707/150‑1
               ACAACCACGAGCCCTGGCCACGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCTTGGGCTCGGCGGCGGCGGCAGGAGCC                                                                                                                                                           >  1:672784/1‑137
               ACAACCACGAGCCCTGGCCACGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCTTGGGCTCGGCGGCGGCGGCAGGAGCC                                                                                                                                                           <  2:672784/137‑1
                                                                                                                           GCTTGGGCTCGGCGGCGGCGGCAGGAGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTG                                                                            >  1:828470/1‑108
                                                                                                                           GCTTGGGCTCGGCGGCGGCGGCAGGAGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTG                                                                            <  2:828470/108‑1
                                                                                                                           GCTTGGGCTCGGCGGCGGCAGCAGGAGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCAC                                                                                                                          <  1:1251093/62‑1
                                                                                                                           GCTTGGGCTCGGCGGCGGCAGCAGGAGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCAC                                                                                                                          >  2:1251093/1‑62
                                                                                                                                   TCGGCGGCGGCGGCAGGAGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAA                          >  1:1307729/1‑150
                                                                                                                                                     GCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGAC        <  1:614080/150‑1
                                                                                                                                                      CCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACT       <  2:942203/150‑1
                                                                                                                                                        GAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCTTGAGCCCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTC     <  2:1277975/150‑1
                                                                                                                                                          GCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCAC   <  2:166032/150‑1
                                                                                                                                                           CCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACT  >  1:199909/1‑150
                                                                                                                                                                                                                                                                                                                 
GCCCTTCGTTGTCCCACAACCACGAGCCCTGGCCACGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCTTGGGCTCGGCGGCGGCGGCAGGAGCCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/452263‑452108
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgagcCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACT  >  NC_002947/452135‑452283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.