| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 669053 = | 50 (0.840) | 8 (0.140) | 7/228 | NT | 14.0% | coding (492/2355 nt) | pbpC | peptidoglycan glycosyltransferase |
| ? | NC_002947 | 669088 = | 51 (0.900) | coding (527/2355 nt) | pbpC | peptidoglycan glycosyltransferase | |||||
TGGCGGTCCGGGCGCAGCCGGCTGGGTGCCT‑GGGGCAGCACGGCCAGCAGTGCCGCTTCGGCAGGTGTCAGGTGCAGGGGCGACTTGCCCAGGTACGCCCAGCTGGCTGCCGCCACGCCCTGAAGCGTGCCGCCGAAAGGTGCGCGGTTCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/669205‑669053‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcaggGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCAGGCACCCAGCCGGCTGCGCCCGGACCGCCACCCCGAGCGTGCCCAGCGTGCCCGGG > NC_002947/669088‑669231 TGGCGGTCCGGGCGCAGCCGGCTGGGTGCCT‑GGGGCAGCACGGCCAGCAGTGCCGCTTCGGCAGGTGTCAGGTGCAGGGGCGACTTGCCCAGGTACGCCCAGCTGGCTGCCGCCACGCCCTGAAGCGTGCCGCCGAAAGGTGCGCGGTTC < 2:1238178/150‑1 GGCGGTCCGGGCGCAGCCGGCTGGGTGCCT‑GGGGCAGCACGGCCAGCAGTGCCGCTTCGGCAGGTGTCAGGTGCAGGGGCGACTTGCCCAGGTACGCCCAGCTGGCTGCCGCCACGCCCTGAAGCGTGCCGCCGAAAGGTGCGCGGTTCA < 1:1461894/150‑1 GCGGTCCGGGCGCAGCCGGCTGGGTGCCTGGGGGCAG‑ATTGCCAGCAGTGCCGCTTCGGCAGGTGTCAGGTGCAGGGGCGACTTGCCCAGGTACGCCCAGCTGGCTGCCGCCACGCCCTGAAGCGTGCCGCCGAAAGGTGCGCGGTTCAG < 2:1364520/150‑1 GCGGTCCGGGCGCAGCCGGCTGGGTGCCT‑GGGGCAGCACGGCCAGCAGTGCCGCTTCGGCAGGTGTCAGGTGCAGGGGCGACTTGCCCAGGTACGCCCAGCTGGCTGCCGCCACGCCCTGAAGCGTGCCGCCGAAAGGTGCGCGGTTCAG < 2:1609662/150‑1 CGGTCCGGGCGCAGCCGGCTGGGTGCCT‑GGGGCAGCACGGCCAGCATTGCCGCTTCGGCAGGTGTCAGGTGCAGGGGCGACTTGCCCAGGTACGCCCAGCTGGCTGCCGCCACGCCCTGAAGCGTGCCGCCGAAAGGTGCGCGGTTCAGG < 1:1586936/150‑1 CTGAAGCGTGCCGCCGAAAGGTGCGCGGTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCA < 1:906127/122‑1 CTGAAGCGTGCCGCCGAAAGGTGCGCGGTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCA > 2:906127/1‑122 TGAAGCGTGCCGCCGAAAGGTGCGCGGTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCT < 1:162559/89‑1 TGAAGCGTGCCGCCGAAAGGTGCGCGGTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCT > 2:162559/1‑89 TGAAGCGTGCCGCCGAAAGGTGCGCGGTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAA < 1:1113561/67‑1 TGAAGCGTGCCGCCGAAAGGTGCGCGGTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAA > 2:1113561/1‑67 AAGCGTGCCGCCGAAAGGTGCGCGGTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCAC < 1:1417090/78‑1 AAGCGTGCCGCCGAAAGGTGCGCGGTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCAC > 2:1417090/1‑78 TTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCAGGCACCCAGCCGGCTGCGCCCGGACCGCCACCCCGAGCGTGCCCAGCGTGCCCGGG > 1:1155283/1‑150 TGGCGGTCCGGGCGCAGCCGGCTGGGTGCCT‑GGGGCAGCACGGCCAGCAGTGCCGCTTCGGCAGGTGTCAGGTGCAGGGGCGACTTGCCCAGGTACGCCCAGCTGGCTGCCGCCACGCCCTGAAGCGTGCCGCCGAAAGGTGCGCGGTTCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/669205‑669053‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcaggGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCAGGCACCCAGCCGGCTGCGCCCGGACCGCCACCCCGAGCGTGCCCAGCGTGCCCGGG > NC_002947/669088‑669231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |