| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1114875 = | 31 (0.520) | 9 (0.190) | 9/190 | NT | 24.5% | intergenic (‑64/+115) | rlmF/valS | ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase |
| ? | NC_002947 | 1114951 = | 31 (0.650) | intergenic (‑140/+39) | rlmF/valS | ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase | |||||
CCGAACAGGCCCTGGCCAACTTCACCGAGCAGCATGCGCGGATTGCAGCGCTGTAATCACTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1115045‑1114875‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcctgtgggagcggccttgtgtcgcGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCGGCCAGCTTGGCGCGTTCCTTCTCGATCACCGCAGGCGGGGCCTTGTCG > NC_002947/1114951‑1115098 CCGAACAGGCCCTGGCCAACTTCACCGAGCAGCATGCGCGGATTGCAGCGCTGTAATCACTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCT < 2:855002/150‑1 CGAACAGGCCCTGGCCAACTTCACCGAGCAGCATGCGCGGATTGCAGCGCTGTAATCACTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTG > 2:81286/1‑150 AGGCCCTGGCCAACTTCACCGAGCAGCATGCGCGGATTGCAGCGCTGTAATCACTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGA < 2:986675/150‑1 GCCCTGGCCAACTTCACCGAGCAGCATGCGCGGATTGCAGCGCTGTAATCACTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGC < 1:1316261/150‑1 CCCTGGCCAACTTCACCGAGCAGCATGCGCGGATTGCAGCGCTGTAATCACTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCG < 2:556110/150‑1 gatctCAACTTCACCGAGCAGCATGCGCGGATTGCAGCGCTGTAATCACTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGC < 2:692752/145‑1 GGCCAACTTCACCGAGCAGCATGCGCGGATTGCAGCGCTGTAATCACTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGCGCGGCCc > 2:1646608/1‑149 CCAACTTCACCGAGCAGCATGCGCGGATTGCCGCGCTGTAATCACTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGTCCGCTCCCACAGGACGGCGCCGACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTG > 1:901786/1‑150 CAACTTCACCGAGCAGCATGCGCGGATTGCAGCGCTGTAATCACTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGT < 1:765999/150‑1 AACTTCACCGAGCAGCATGCGCGGATTGCAGCGACGTCATCCCTCGAGAGCCCGATGGGGCCGCTGTACGTGCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCATCAAGGCGGCACCCTCCTGTGGGAGCGGCCagatc > 1:692752/1‑145 CTTCACCGAGCAGCATGCGCGGATTGCAGCGCTGTAATCACTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTC < 1:1337638/150‑1 AGCGCTGTAATCACTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGT < 1:1637121/122‑1 AGCGCTGTAATCACTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGT > 2:1637121/1‑122 cgAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGT < 1:409942/105‑1 CTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGT > 2:409942/1‑107 CTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCC > 1:739484/1‑103 CTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCC < 2:739484/103‑1 CCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCT > 2:1554526/1‑150 GCTCCCACAGGACGGCGCCAACCTTCAAGGCGCTACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGC > 1:587656/1‑150 CCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGT > 2:1122029/1‑150 CACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGC < 1:1474781/48‑1 CACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGC > 2:1474781/1‑48 ACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAA > 1:33783/1‑132 ACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAA < 2:33783/132‑1 GACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGC < 1:1216484/99‑1 GACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGC > 2:1216484/1‑99 GCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCGG < 1:1122029/150‑1 CAACCTTCAAGGCGCCACCGTCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCGGCCAG > 1:350676/1‑150 GCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCC‑AGGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTC < 2:1117980/104‑1 CCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCGGCCAGCTTGGCGCGTTCCTTCTCGATCACCGCAGGCGGG > 1:104311/1‑150 CCTTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCGGCCAGCTTGGCGCGTTCCTTCTCGATCACCGCAGGCGGG < 2:776679/150‑1 TTGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCGGCCAGCTTGGCGCGTTCCTTCTCGATCACCGCAGGCGGGGC < 1:1307913/150‑1 TGTGTCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCGGCCAGCTTGGCGCGTTCCTTCTCGATCACCGCAGGCGGGGgc < 1:887773/150‑3 TCGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCGGCCAGCTTGGCGCGTTCCTTCTCGATCACCGCAGGCGGGGCCTTGT > 1:1261288/1‑150 CGCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCGGCCAGCTTGGCGCGTTCCTTCTCGATCACCGCAGGCGGGGCCTTGTC < 1:134645/150‑1 GCGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCGGCCAGCTTGGCGCGTTCCTTCTCGATCACCGCAGGCGGGGCCTTGTCG > 1:993924/1‑150 CCGAACAGGCCCTGGCCAACTTCACCGAGCAGCATGCGCGGATTGCAGCGCTGTAATCACTAGAGAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1115045‑1114875‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcctgtgggagcggccttgtgtcgcGAAAGGGCCGTACAGCGGCCCCAACGGTCTCTCTAGTGATTACAGCGCTGCAATCCGCGCATGCTGCTCGGTGAAGTTGGCCAGGGCCTGTTCGGACTCGGCCAGCTTGGCGCGTTCCTTCTCGATCACCGCAGGCGGGGCCTTGTCG > NC_002947/1114951‑1115098 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |