New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1126591 = | 76 (1.270) | 6 (0.110) | 6/228 | NT | 8.2% | intergenic (‑40/+110) | tdcG‑II/gcvP‑I | L‑serine dehydratase/glycine dehydrogenase |
? | NC_002947 | 1126663 = | 63 (1.110) | intergenic (‑112/+38) | tdcG‑II/gcvP‑I | L‑serine dehydratase/glycine dehydrogenase |
CGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCGCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1126644‑1126591 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctacaCAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCTTCCACCAGGCT > NC_002947/1126663‑1126811 CGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCGCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAG > 1:1211688/1‑108 CGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCGCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAG < 2:1211688/108‑1 TGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCGCCTACACAGAGCCCGCCACCCAA > 1:216218/1‑65 TGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCGCCTACACAGAGCCCGCCACCCAA < 2:216218/65‑1 CTCCGCATTCGCGGGTAAACCCGCGCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGA < 1:91100/63‑1 CTCCGCATTCGCGGGTAAACCCGCGCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGA > 2:91100/1‑63 ACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCTTCCACCAGGCT > 2:385631/1‑150 CGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCGCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1126644‑1126591 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctacaCAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCTTCCACCAGGCT > NC_002947/1126663‑1126811 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |