| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1167534 = | 58 (0.970) | 4 (0.070) | 4/224 | NT | 6.6% | coding (472/729 nt) | pgl | 6‑phosphogluconolactonase |
| ? | NC_002947 | 1167575 = | 59 (1.060) | coding (513/729 nt) | pgl | 6‑phosphogluconolactonase | |||||
CCCTGGCCTTGCACAGACAGCGCGATGAAGGCCGCGCTGGCCAGCAGCGAACGGGTCATCGACAGGCGCTGGTGCGGCACGCTCGGCGCCAGCATCGGCAGGCAGCGGCGTGGGCCCGCCAGGTCCAGGCCTGCTTCCAGGTTGGGACTGGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1167688‑1167534‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcgggCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCG > NC_002947/1167575‑1167656 CCCTGGCCTTGCACAGACAGCGCGATGAAGGCCGCGCTGGCCAGCAGCGAACGGGTCATCGACAGGCGCTGGTGCGGCACGCTCGGCGCCAGCATCGGCAGGCAGCGGCGTGGGCCCGCCAGGTCCAGGCCTGCTTCCAGGTTGGGACTG > 2:1498465/1‑150CCCTGGCCTTGCACAGACAGCGCGATGAAGGCCGCGCTGGCCAGCAGCGAACCGCTAATCGACAGGCGCTGGTGCGGCACGCTCGGCGCCAGCATCGGCAGGCAGCCGCGTGGGCCCGCCAGGTCCAGGCCTGCTTCCAGGTTGGGACTG < 2:389274/150‑1 GGCCTTGCACAGACAGCGCGATGAAGGCCGCGCTGGCCAGCAGCGAACGGGTCATCGACAGGCGCTGGTGCGGCACGCTCGGCGCCAGCATCGGCAGGCAGCGGCGTGGGCCCGCCAGGTCCAGGCCTGCTTCCAGGTTGGGACTGGCGG < 1:714805/150‑1 GCCTTGCACAGACAGCGCGATGAAGGCCGCGCTGGCCAGCAGCGAACGGGTCATCGACAGGCGCTGGTGCGGCACGCTCGGCGCCAGCATCGGCAGGCAGCGGCGTGGGCCCGCCAGGTCCAGGCCTGCTTCCAGGTTGGGACTGGCGGG < 1:1498465/150‑1 GCCTTGCACAGACAGCGCGATGAAGGCCGCGCTGGCCAGCAGCGAACGGGTCATCGACAGGCGCTGGTGCGGCACGCTCGGCGCCAGCATCGGCAGGCAGCGGCGTGGGCCCGCCAGGTCCAGGCCTGCTTCCAGGTTGGGACTGGCGGG < 1:328345/150‑1 GCCTTGCACAGACAGCGCGATGAACGCCGCGTTGTCCAGTAGCGAACGGGTCATCGACAGGCGCTGGTGCGGCACGCTCGGCGCCAGCATCGGCAGGCAGCGGCGTGGGCCCGCCAGGTCCAGGCCTGCTTCCAGGTTGGGACTGGtatg < 1:1550254/150‑5 CCCGCCAGGTCCAGGCCTGCTTCCAGGTTGGGACTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCG > 1:351307/1‑123 CCCGCCAGGTCCAGGCCTGCTTCCAGGTTGGGACTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCG < 2:351307/123‑1 CCGCCAGGTCCAGGCCTGCTTCCAGGTTGGGACTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCC > 1:476721/1‑102 CCGCCAGGTCCAGGCCTGCTTCCAGGTTGGGACTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCC < 2:476721/102‑1 CCCTGGCCTTGCACAGACAGCGCGATGAAGGCCGCGCTGGCCAGCAGCGAACGGGTCATCGACAGGCGCTGGTGCGGCACGCTCGGCGCCAGCATCGGCAGGCAGCGGCGTGGGCCCGCCAGGTCCAGGCCTGCTTCCAGGTTGGGACTGGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1167688‑1167534‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcgggCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCG > NC_002947/1167575‑1167656 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |