New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 122378052 (0.870)8 (0.140) 8/228 NT 13.7% coding (272/771 nt) gltL glutamate/aspartate ABC transporter ATP binding protein
?NC_002947 = 1223795 51 (0.900)coding (257/771 nt) gltL glutamate/aspartate ABC transporter ATP binding protein

GCATGGGCACTGAGGCCTACACGGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1223627‑1223780
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccaAGCTGCGCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGGCCTGGCGCTGCTCGACCGT  <  NC_002947/1223795‑1223647
                                                                                                                                                                                                                                                                                                               
GCATGGGCACTGAGGCCTACACGGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATG                                                                                                                                                           >  2:82062/1‑150
 CATGGGCACTGAGGCCTACACGGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGC                                                                                                                                                          <  1:783735/150‑1
    GGGCACTGAGGCCTACACGGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGACAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCA                                                                                                                                                       <  2:322965/150‑1
                      GGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGCGCGTGG                                                                                                                                     >  1:1541536/1‑150
                             CAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGCGCGTGGGCATGGT                                                                                                                              <  2:1541536/150‑1
                                                   GCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATG                                                                                                                                                           <  1:1463460/99‑1
                                                   GCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATG                                                                                                                                                           >  2:1463460/1‑99
                                                                                  GCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGCGCGTG                                                                                                                                      <  2:1532703/89‑1
                                                                                  GCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGCGCGTG                                                                                                                                      >  1:1532703/1‑89
                                                                                    TGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGCGCGTGGGCATGG                                                                                                                               <  1:697302/94‑1
                                                                                    TGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGCGCGTGGGCATGG                                                                                                                               >  2:697302/1‑94
                                                                                                AGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGCGCGTGGGCATG                                                                                                                                <  1:396329/81‑1
                                                                                                AGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGCGCGTGGGCATG                                                                                                                                >  2:396329/1‑81
                                                                                                                                                       CCAAGCTGCGCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGGCCTGGCGCTGCTCGACC    <  2:144234/150‑1
                                                                                                                                                       CCAAGCTGCGCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGGCCTG                 <  1:1596030/137‑1
                                                                                                                                                       CCAAGCTGCGCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGGCCTG                 >  2:1596030/1‑137
                                                                                                                                                       CCAAGCTGCGCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAG                          >  2:1454061/1‑128
                                                                                                                                                       CCAAGCTGCGCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAG                          <  1:1454061/128‑1
                                                                                                                                                         AAGCTGCCCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGGCCTGGCGCTGCTCGACCGT  <  1:654658/150‑1
                                                                                                                                                                                                                                                                                                               
GCATGGGCACTGAGGCCTACACGGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1223627‑1223780
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccaAGCTGCGCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGGCCTGGCGCTGCTCGACCGT  <  NC_002947/1223795‑1223647

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.