| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1444708 | 66 (1.100) | 4 (0.070) | 4/236 | NT | 5.6% | coding (325/1530 nt) | PP_1263 | fusaric acid resistance protein |
| ? | NC_002947 | = 1444721 | 69 (1.170) | coding (338/1530 nt) | PP_1263 | fusaric acid resistance protein | |||||
CAAGGCCATGGCCGGTGTGGTCGAGTCGGCGGAAAAGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1444668‑1444708‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccTGGCCGTTGGCCTGGAGCTTTTCCGCCGACTCGACCACACCGGCCATGGCCTTGGCTTCGCGCACCCGCGCTGCGGCCATGGCCAGGCTTGGGCTACCGGCCACGGCCAGGGTAACCCAGCGGTCCAGCTGAGGGTCACCATAGGCGTG < NC_002947/1444721‑1444573 CAAGGCCATGGCCGGTGTGGTCGAGTCGGCGGAAAAGCTCCTGGCCGTTGGCCTGGAG < 1:781599/58‑1CAAGGCCATGGCCGGTGTGGTCGAGTCGGCGGAAAAGCTCCTGGCCGTTGGCCTGGAG > 2:781599/1‑58 GAAAAGCTCCAGGCCAACGGCCAGGAGCTTTTCCGCCGACTCGACCACACCGGCCATGGCCTTGGCTTCGCGCACCCGCGCTGCGGCCAT < 1:1351801/90‑1 GAAAAGCTCCAGGCCAACGGCCAGGAGCTTTTCCGCCGACTCGACCACACCGGCCATGGCCTTGGCTTCGCGCACCCGCGCTGCGGCCAT > 2:1351801/1‑90 CCTGGCCGTTGGCCTGGAGCTTTTCCGCCGACTCGACCACACCGGCCATGGCCTTGGCTTCGCGCACCCGCGCTGCGGCCATGGCCAGGCTTGGGCTACCGGCCACGGCCAGGGTAACCCAGCGGTCCAGCTGAGGGTCACCATAGGCGT < 1:440318/150‑1 CTGGCCGTTGGCCTGGAGCTTTTCCGCCGACTCGACCACACCGGCCATGGCCTTGGCTTCGCGCACCCGCGCTGCGGCCATGGCCAGGCTTGGGCTACCGGCCACGGCCAGGGTAACCCAGCGGTCCAGCTGAGGGTCACCATAGGCGTG > 1:423361/1‑150 CTGGCCGTTGGCCTGGAGCTTTTCCGCCGACTCGACCACACCGGCCATGGCCTTGGCTTCGCGCACCCGCGCTGCGGCCATGGCCAGGCTTGGGCTACCGGCCAC > 1:271598/1‑105 CTGGCCGTTGGCCTGGAGCTTTTCCGCCGACTCGACCACACCGGCCATGGCCTTGGCTTCGCGCACCCGCGCTGCGGCCATGGCCAGGCTTGGGCTACCGGCCAC < 2:271598/105‑1 CAAGGCCATGGCCGGTGTGGTCGAGTCGGCGGAAAAGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1444668‑1444708‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccTGGCCGTTGGCCTGGAGCTTTTCCGCCGACTCGACCACACCGGCCATGGCCTTGGCTTCGCGCACCCGCGCTGCGGCCATGGCCAGGCTTGGGCTACCGGCCACGGCCAGGGTAACCCAGCGGTCCAGCTGAGGGTCACCATAGGCGTG < NC_002947/1444721‑1444573 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |